RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 RPRMQ9NS64 109 aa6.27□□□□□ -1.41
USP3-217ENST00000560070 XCL2Q9UBD3 114 aa6.27□□□□□ -1.41
USP3-217ENST00000560070 ZNF705FA8MVS1 300 aaPredicted RBP6.26□□□□□ -1.41
USP3-217ENST00000560070 MRPS12O15235 138 aaKnown RBP6.26□□□□□ -1.41
USP3-217ENST00000560070 DEFB4AO15263 64 aa6.26□□□□□ -1.41
USP3-217ENST00000560070 GIG44P09565 113 aaPredicted RBP6.26□□□□□ -1.41
USP3-217ENST00000560070 PYYP10082 97 aa6.26□□□□□ -1.41
USP3-217ENST00000560070 C4BPBP20851 252 aa6.26□□□□□ -1.41
USP3-217ENST00000560070 PSG3Q16557 428 aa6.26□□□□□ -1.41
USP3-217ENST00000560070 HSD17B11Q8NBQ5 300 aa6.26□□□□□ -1.41
USP3-217ENST00000560070 OR11H2Q8NH07 326 aa6.26□□□□□ -1.41
USP3-217ENST00000560070 GATAD1Q8WUU5 269 aa6.26□□□□□ -1.41
USP3-217ENST00000560070 BLNKQ8WV28 456 aa6.26□□□□□ -1.41
USP3-217ENST00000560070 SAV1Q9H4B6 383 aaPredicted RBP6.26□□□□□ -1.41
USP3-217ENST00000560070 SEPSECSQ9HD40 501 aaKnown RBP6.26□□□□□ -1.41
USP3-217ENST00000560070 hCG_2014768A0A024R1R8 64 aa6.25□□□□□ -1.41
USP3-217ENST00000560070 IGHV3OR16-12A0A075B7B8 117 aa6.25□□□□□ -1.41
USP3-217ENST00000560070 A0A0J9YWU9 116 aa6.25□□□□□ -1.41
USP3-217ENST00000560070 A0A0J9YX75 114 aa6.25□□□□□ -1.41
USP3-217ENST00000560070 SLC17A3O00476 420 aa6.25□□□□□ -1.41
USP3-217ENST00000560070 HLA-DRB4P13762 266 aa6.25□□□□□ -1.41
USP3-217ENST00000560070 NUTF2P61970 127 aaKnown RBP6.25□□□□□ -1.41
USP3-217ENST00000560070 RHOBP62745 196 aa6.25□□□□□ -1.41
USP3-217ENST00000560070 MORN3Q6PF18 240 aaPredicted RBP6.25□□□□□ -1.41
USP3-217ENST00000560070 FOXI2Q6ZQN5 318 aa6.25□□□□□ -1.41
USP3-217ENST00000560070 AQP10Q96PS8 301 aa6.25□□□□□ -1.41
USP3-217ENST00000560070 SLC25A2Q9BXI2 301 aa6.25□□□□□ -1.41
USP3-217ENST00000560070 MFFQ9GZY8 342 aa6.25□□□□□ -1.41
USP3-217ENST00000560070 SLC35B3Q9H1N7 401 aa6.25□□□□□ -1.41
USP3-217ENST00000560070 PPP1R14DQ9NXH3 145 aa6.25□□□□□ -1.41
USP3-217ENST00000560070 ZNF586Q9NXT0 402 aa6.25□□□□□ -1.41
USP3-217ENST00000560070 RNF24Q9Y225 148 aa6.25□□□□□ -1.41
USP3-217ENST00000560070 TIMM9Q9Y5J7 89 aa6.25□□□□□ -1.41
USP3-217ENST00000560070 HLA-DRB4X5D2U9 266 aa6.25□□□□□ -1.41
USP3-217ENST00000560070 TGP01266 2768 aa6.24□□□□□ -1.41
USP3-217ENST00000560070 A0A087X0K7 114 aa6.24□□□□□ -1.41
USP3-217ENST00000560070 KRTAP9-6A0A140TA67 174 aa6.24□□□□□ -1.41
USP3-217ENST00000560070 PRAC2D3DTV9 90 aa6.24□□□□□ -1.41
USP3-217ENST00000560070 HMGB3O15347 200 aaKnown RBP6.24□□□□□ -1.41
USP3-217ENST00000560070 OR10J4P0C629 311 aa6.24□□□□□ -1.41
USP3-217ENST00000560070 SPP1P10451 314 aa6.24□□□□□ -1.41
USP3-217ENST00000560070 PSG9Q00887 426 aa6.24□□□□□ -1.41
USP3-217ENST00000560070 HIST1H1AQ02539 215 aaPredicted RBP6.24□□□□□ -1.41
USP3-217ENST00000560070 SAMD13Q5VXD3 122 aa6.24□□□□□ -1.41
USP3-217ENST00000560070 RPL7L1Q6DKI1 246 aaKnown RBP6.24□□□□□ -1.41
USP3-217ENST00000560070 FAM122CQ6P4D5 195 aa6.24□□□□□ -1.41
USP3-217ENST00000560070 MUC7Q8TAX7 377 aa6.24□□□□□ -1.41
USP3-217ENST00000560070 RPUSD4Q96CM3 377 aaKnown RBP6.24□□□□□ -1.41
USP3-217ENST00000560070 SAT2Q96F10 170 aaPredicted RBP6.24□□□□□ -1.41
USP3-217ENST00000560070 OR51M1Q9H341 326 aa6.24□□□□□ -1.41
USP3-217ENST00000560070 EDA2RQ9HAV5 297 aa6.24□□□□□ -1.41
USP3-217ENST00000560070 ZNF331Q9NQX6 463 aaPredicted RBP6.24□□□□□ -1.41
USP3-217ENST00000560070 TNFSF18Q9UNG2 199 aa6.24□□□□□ -1.41
USP3-217ENST00000560070 FUT9Q9Y231 359 aa6.24□□□□□ -1.41
USP3-217ENST00000560070 TP53TG1Q9Y2A0 90 aa6.24□□□□□ -1.41
USP3-217ENST00000560070 A0A1W2PPV4 95 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 RNF222A6NCQ9 220 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 G3V3Q6 166 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 ARPC5O15511 151 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 OR7C2O60412 319 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 DUSP14O95147 198 aaKnown RBP6.23□□□□□ -1.41
USP3-217ENST00000560070 NBEAP1P0C6P0 100 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 IGLC2P0DOY2 106 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 HIST1H1EP10412 219 aaKnown RBP6.23□□□□□ -1.41
USP3-217ENST00000560070 CNN1P51911 297 aaKnown RBP6.23□□□□□ -1.41
USP3-217ENST00000560070 RAB2AP61019 212 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 ERCC8Q13216 396 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 ACOT6Q3I5F7 207 aaPredicted RBP6.23□□□□□ -1.41
USP3-217ENST00000560070 LCN15Q6UWW0 184 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 EXOC3-AS1Q8N2X6 119 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 OR8A1Q8NGG7 326 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 OR10G4Q8NGN3 311 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 OR10G9Q8NGN4 311 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 OR10G7Q8NGN6 311 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 RNF141Q8WVD5 230 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 ASB13Q8WXK3 278 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 FAM167A-AS1Q96KT0 104 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 PAXXQ9BUH6 204 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 SH3BGRL3Q9H299 93 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 HRH4Q9H3N8 390 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 KCNIP2Q9NS61 270 aa6.23□□□□□ -1.41
USP3-217ENST00000560070 SORL1Q92673 2214 aa6.22□□□□□ -1.41
USP3-217ENST00000560070 TRBV19A0A075B6N1 114 aa6.22□□□□□ -1.41
USP3-217ENST00000560070 BORCS7-ASMTA0A0B4J1R7 106 aa6.22□□□□□ -1.41
USP3-217ENST00000560070 J3KRW8 73 aa6.22□□□□□ -1.41
USP3-217ENST00000560070 M0R2Z0 102 aa6.22□□□□□ -1.41
USP3-217ENST00000560070 NDUFB4O95168 129 aa6.22□□□□□ -1.41
USP3-217ENST00000560070 M6PRP20645 277 aa6.22□□□□□ -1.41
USP3-217ENST00000560070 ATP6V0CP27449 155 aa6.22□□□□□ -1.41
USP3-217ENST00000560070 EMP1P54849 157 aa6.22□□□□□ -1.41
USP3-217ENST00000560070 PMS2P11Q13670 270 aa6.22□□□□□ -1.41
USP3-217ENST00000560070 ICAM4Q14773 271 aa6.22□□□□□ -1.41
USP3-217ENST00000560070 SPINK13Q1W4C9 94 aa6.22□□□□□ -1.41
USP3-217ENST00000560070 CSNK1G2-AS1Q8NCQ2 148 aa6.22□□□□□ -1.41
USP3-217ENST00000560070 OR11H4Q8NGC9 324 aa6.22□□□□□ -1.41
USP3-217ENST00000560070 SLC50A1Q9BRV3 221 aa6.22□□□□□ -1.41
USP3-217ENST00000560070 PARD6GQ9BYG4 376 aaPredicted RBP6.22□□□□□ -1.41
USP3-217ENST00000560070 TMEM14CQ9P0S9 112 aa6.22□□□□□ -1.41
USP3-217ENST00000560070 DNAH9Q9NYC9 4486 aa6.22□□□□□ -1.41
USP3-217ENST00000560070 TRAV12-2A0A075B6T6 113 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms