RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 NDPQ00604 133 aa11.35□□□□□ -0.59
CSPG4P12-202ENST00000559989 PIP4P2Q8N4L2 257 aa11.35□□□□□ -0.59
CSPG4P12-202ENST00000559989 CDKN1AP38936 164 aa11.34□□□□□ -0.59
CSPG4P12-202ENST00000559989 MSRB2Q9Y3D2 182 aa11.34□□□□□ -0.59
CSPG4P12-202ENST00000559989 DOCK4Q8N1I0 1966 aa11.34□□□□□ -0.59
CSPG4P12-202ENST00000559989 IGHV2-26A0A0B4J1V2 119 aa11.34□□□□□ -0.59
CSPG4P12-202ENST00000559989 HERVK_113P63121 156 aa11.34□□□□□ -0.59
CSPG4P12-202ENST00000559989 PRSS29PA6NIE9 313 aa11.34□□□□□ -0.59
CSPG4P12-202ENST00000559989 MRPL14Q6P1L8 145 aaKnown RBP11.34□□□□□ -0.59
CSPG4P12-202ENST00000559989 R3HDMLQ9H3Y0 253 aa11.34□□□□□ -0.59
CSPG4P12-202ENST00000559989 GREB1Q4ZG55 1949 aa11.34□□□□□ -0.59
CSPG4P12-202ENST00000559989 TNRC6AQ8NDV7 1962 aaKnown RBP11.34□□□□□ -0.59
CSPG4P12-202ENST00000559989 TRPM3Q9HCF6 1732 aaPredicted RBP11.34□□□□□ -0.59
CSPG4P12-202ENST00000559989 PRB1P04280 392 aa11.34□□□□□ -0.59
CSPG4P12-202ENST00000559989 RNF5Q99942 180 aa11.34□□□□□ -0.59
CSPG4P12-202ENST00000559989 IGKV1D-13A0A0B4J2D9 117 aa11.34□□□□□ -0.59
CSPG4P12-202ENST00000559989 B5MCH6 92 aa11.34□□□□□ -0.59
CSPG4P12-202ENST00000559989 IGKV1-13P0DP09 117 aa11.34□□□□□ -0.59
CSPG4P12-202ENST00000559989 PRB2P02812 416 aaPredicted RBP11.33□□□□□ -0.59
CSPG4P12-202ENST00000559989 APOC4P55056 127 aa11.33□□□□□ -0.59
CSPG4P12-202ENST00000559989 ZNF329Q86UD4 541 aa11.33□□□□□ -0.59
CSPG4P12-202ENST00000559989 VWC2Q2TAL6 325 aa11.33□□□□□ -0.6
CSPG4P12-202ENST00000559989 SMIM20Q8N5G0 67 aa11.33□□□□□ -0.6
CSPG4P12-202ENST00000559989 Q8N8P6 123 aa11.33□□□□□ -0.6
CSPG4P12-202ENST00000559989 Q8TAT8 98 aa11.33□□□□□ -0.6
CSPG4P12-202ENST00000559989 PSMB8P28062 276 aa11.33□□□□□ -0.6
CSPG4P12-202ENST00000559989 PPP1R32Q7Z5V6 425 aa11.33□□□□□ -0.6
CSPG4P12-202ENST00000559989 MUSTN1Q8IVN3 82 aa11.33□□□□□ -0.6
CSPG4P12-202ENST00000559989 OOSP1A8MZH6 123 aa11.33□□□□□ -0.6
CSPG4P12-202ENST00000559989 CRYGCP07315 174 aa11.33□□□□□ -0.6
CSPG4P12-202ENST00000559989 BAALC-AS2P0C853 105 aa11.33□□□□□ -0.6
CSPG4P12-202ENST00000559989 TRAV12-2A0A075B6T6 113 aa11.32□□□□□ -0.6
CSPG4P12-202ENST00000559989 CELA3BP08861 270 aa11.32□□□□□ -0.6
CSPG4P12-202ENST00000559989 PDE6HQ13956 83 aa11.32□□□□□ -0.6
CSPG4P12-202ENST00000559989 ANK1P16157 1881 aa11.32□□□□□ -0.6
CSPG4P12-202ENST00000559989 CFPP27918 469 aa11.32□□□□□ -0.6
CSPG4P12-202ENST00000559989 GLRX5Q86SX6 157 aa11.32□□□□□ -0.6
CSPG4P12-202ENST00000559989 CFHR4Q92496 578 aa11.32□□□□□ -0.6
CSPG4P12-202ENST00000559989 PHF3Q92576 2039 aaKnown RBP11.32□□□□□ -0.6
CSPG4P12-202ENST00000559989 NXPH4O95158 308 aa11.32□□□□□ -0.6
CSPG4P12-202ENST00000559989 TMEM219Q86XT9 240 aa11.32□□□□□ -0.6
CSPG4P12-202ENST00000559989 ARFGEF3Q5TH69 2177 aa11.32□□□□□ -0.6
CSPG4P12-202ENST00000559989 SRSF2Q01130 221 aaKnown RBP11.32□□□□□ -0.6
CSPG4P12-202ENST00000559989 SRSF8Q9BRL6 282 aaKnown RBP11.32□□□□□ -0.6
CSPG4P12-202ENST00000559989 PRSS46E5RG02 174 aa11.31□□□□□ -0.6
CSPG4P12-202ENST00000559989 C5orf67F2Z3F1 127 aa11.31□□□□□ -0.6
CSPG4P12-202ENST00000559989 NRXN3Q9Y4C0 1643 aa11.31□□□□□ -0.6
CSPG4P12-202ENST00000559989 SIGLEC12Q96PQ1 595 aa11.31□□□□□ -0.6
CSPG4P12-202ENST00000559989 NDUFA12Q9UI09 145 aa11.31□□□□□ -0.6
CSPG4P12-202ENST00000559989 IGHV1-3A0A0C4DH29 117 aa11.31□□□□□ -0.6
CSPG4P12-202ENST00000559989 COX8AP10176 69 aa11.31□□□□□ -0.6
CSPG4P12-202ENST00000559989 Q0VG73 95 aa11.31□□□□□ -0.6
CSPG4P12-202ENST00000559989 FNDC10F2Z333 226 aa11.31□□□□□ -0.6
CSPG4P12-202ENST00000559989 NDUFS6O75380 124 aaKnown RBP11.31□□□□□ -0.6
CSPG4P12-202ENST00000559989 PYY3Q5JQD4 70 aa11.31□□□□□ -0.6
CSPG4P12-202ENST00000559989 ARID2Q68CP9 1835 aa11.3□□□□□ -0.6
CSPG4P12-202ENST00000559989 HLA-DRB4P13762 266 aa11.3□□□□□ -0.6
CSPG4P12-202ENST00000559989 ATP1A1-AS1Q5TC04 95 aa11.3□□□□□ -0.6
CSPG4P12-202ENST00000559989 MCRIP2Q9BUT9 160 aaKnown RBP11.3□□□□□ -0.6
CSPG4P12-202ENST00000559989 HLA-DRB4X5D2U9 266 aa11.3□□□□□ -0.6
CSPG4P12-202ENST00000559989 DOCK3Q8IZD9 2030 aa11.3□□□□□ -0.6
CSPG4P12-202ENST00000559989 C1QCP02747 245 aa11.3□□□□□ -0.6
CSPG4P12-202ENST00000559989 SMIM10L1P0DMW3 83 aa11.3□□□□□ -0.6
CSPG4P12-202ENST00000559989 SMIM10Q96HG1 83 aa11.3□□□□□ -0.6
CSPG4P12-202ENST00000559989 A0A0B4J2C4 111 aa11.3□□□□□ -0.6
CSPG4P12-202ENST00000559989 ETDBQ3ZM63 59 aa11.3□□□□□ -0.6
CSPG4P12-202ENST00000559989 SAP25Q8TEE9 199 aa11.3□□□□□ -0.6
CSPG4P12-202ENST00000559989 TAX1BP3O14907 124 aa11.3□□□□□ -0.6
CSPG4P12-202ENST00000559989 CFHR3Q02985 330 aa11.3□□□□□ -0.6
CSPG4P12-202ENST00000559989 DKK4Q9UBT3 224 aa11.3□□□□□ -0.6
CSPG4P12-202ENST00000559989 POLR3KQ9Y2Y1 108 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P12-202ENST00000559989 CHCHD2Q9Y6H1 151 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P12-202ENST00000559989 LRP5O75197 1615 aa11.29□□□□□ -0.6
CSPG4P12-202ENST00000559989 RALGAPA2Q2PPJ7 1873 aa11.29□□□□□ -0.6
CSPG4P12-202ENST00000559989 ARMS2P0C7Q2 107 aa11.29□□□□□ -0.6
CSPG4P12-202ENST00000559989 RS1O15537 224 aa11.29□□□□□ -0.6
CSPG4P12-202ENST00000559989 C4orf48Q5BLP8 95 aa11.29□□□□□ -0.6
CSPG4P12-202ENST00000559989 CTHRC1Q96CG8 243 aa11.29□□□□□ -0.6
CSPG4P12-202ENST00000559989 DKK1O94907 266 aa11.29□□□□□ -0.6
CSPG4P12-202ENST00000559989 LINC00527Q9UJ94 153 aa11.29□□□□□ -0.6
CSPG4P12-202ENST00000559989 RSPO4Q2I0M5 234 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P12-202ENST00000559989 M0R1W7 72 aa11.29□□□□□ -0.6
CSPG4P12-202ENST00000559989 PRSS57Q6UWY2 283 aa11.29□□□□□ -0.6
CSPG4P12-202ENST00000559989 DAZ1Q9NQZ3 744 aaKnown RBP11.29□□□□□ -0.6
CSPG4P12-202ENST00000559989 TMEM200BQ69YZ2 307 aa11.29□□□□□ -0.6
CSPG4P12-202ENST00000559989 C20orf144Q9BQM9 153 aa11.29□□□□□ -0.6
CSPG4P12-202ENST00000559989 SIVA1O15304 175 aa11.28□□□□□ -0.6
CSPG4P12-202ENST00000559989 SLC25A45Q8N413 288 aa11.28□□□□□ -0.6
CSPG4P12-202ENST00000559989 SPTSSBQ8NFR3 76 aa11.28□□□□□ -0.6
CSPG4P12-202ENST00000559989 E9PQ18 207 aa11.28□□□□□ -0.6
CSPG4P12-202ENST00000559989 H3BMG7 143 aa11.28□□□□□ -0.6
CSPG4P12-202ENST00000559989 C2orf66Q6UXQ4 117 aa11.28□□□□□ -0.6
CSPG4P12-202ENST00000559989 Q86TA4 180 aa11.28□□□□□ -0.6
CSPG4P12-202ENST00000559989 IGLC2P0DOY2 106 aa11.28□□□□□ -0.6
CSPG4P12-202ENST00000559989 IGLC3P0DOY3 106 aa11.28□□□□□ -0.6
CSPG4P12-202ENST00000559989 LINC01545Q5VT33 79 aa11.28□□□□□ -0.6
CSPG4P12-202ENST00000559989 C3orf56Q8N813 242 aa11.28□□□□□ -0.6
CSPG4P12-202ENST00000559989 IGFBPL1Q8WX77 278 aa11.28□□□□□ -0.6
CSPG4P12-202ENST00000559989 LGALS9BQ3B8N2 356 aa11.28□□□□□ -0.6
CSPG4P12-202ENST00000559989 LGALS9CQ6DKI2 356 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms