RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 CBY3A6NI87 242 aa9.15□□□□□ -0.94
TPM1-220ENST00000559556 SFT2D2O95562 160 aa9.15□□□□□ -0.94
TPM1-220ENST00000559556 NUDT3O95989 172 aa9.15□□□□□ -0.94
TPM1-220ENST00000559556 HOXB5P09067 269 aa9.15□□□□□ -0.94
TPM1-220ENST00000559556 CXCL3P19876 107 aa9.15□□□□□ -0.94
TPM1-220ENST00000559556 CCL18P55774 89 aa9.15□□□□□ -0.94
TPM1-220ENST00000559556 RAP2BP61225 183 aa9.15□□□□□ -0.94
TPM1-220ENST00000559556 SELENOTP62341 195 aa9.15□□□□□ -0.94
TPM1-220ENST00000559556 FGL1Q08830 312 aa9.15□□□□□ -0.94
TPM1-220ENST00000559556 FCN2Q15485 313 aa9.15□□□□□ -0.94
TPM1-220ENST00000559556 OR8A1Q8NGG7 326 aa9.15□□□□□ -0.94
TPM1-220ENST00000559556 RNF141Q8WVD5 230 aa9.15□□□□□ -0.94
TPM1-220ENST00000559556 LINC00588Q9Y4M8 146 aa9.15□□□□□ -0.94
TPM1-220ENST00000559556 VPS13BQ7Z7G8 4022 aa9.15□□□□□ -0.95
TPM1-220ENST00000559556 IL5P05113 134 aa9.14□□□□□ -0.95
TPM1-220ENST00000559556 LINC00869P0C866 280 aa9.14□□□□□ -0.95
TPM1-220ENST00000559556 TAS2R60P59551 318 aa9.14□□□□□ -0.95
TPM1-220ENST00000559556 UBE2MP61081 183 aaKnown RBP9.14□□□□□ -0.95
TPM1-220ENST00000559556 HIST1H1AQ02539 215 aaPredicted RBP9.14□□□□□ -0.95
TPM1-220ENST00000559556 ASAH1Q13510 395 aa9.14□□□□□ -0.95
TPM1-220ENST00000559556 PSG3Q16557 428 aa9.14□□□□□ -0.95
TPM1-220ENST00000559556 RNASE8Q8TDE3 154 aaKnown RBP9.14□□□□□ -0.95
TPM1-220ENST00000559556 TMEM263Q8WUH6 116 aaKnown RBP9.14□□□□□ -0.95
TPM1-220ENST00000559556 UHRF2Q96PU4 802 aa9.14□□□□□ -0.95
TPM1-220ENST00000559556 TIMM8BQ9Y5J9 83 aaPredicted RBP9.14□□□□□ -0.95
TPM1-220ENST00000559556 SMCO3A2RU48 225 aa9.13□□□□□ -0.95
TPM1-220ENST00000559556 PMS2P5A8MQ11 134 aa9.13□□□□□ -0.95
TPM1-220ENST00000559556 LYRM1O43325 122 aa9.13□□□□□ -0.95
TPM1-220ENST00000559556 HYPMO75409 117 aa9.13□□□□□ -0.95
TPM1-220ENST00000559556 RHOBP62745 196 aa9.13□□□□□ -0.95
TPM1-220ENST00000559556 ID3Q02535 119 aa9.13□□□□□ -0.95
TPM1-220ENST00000559556 ZNF493Q6ZR52 646 aa9.13□□□□□ -0.95
TPM1-220ENST00000559556 MAPKAPK5-AS1Q8N8E1 139 aa9.13□□□□□ -0.95
TPM1-220ENST00000559556 LINC01587Q99440 93 aa9.13□□□□□ -0.95
TPM1-220ENST00000559556 FNDC10F2Z333 226 aa9.12□□□□□ -0.95
TPM1-220ENST00000559556 K7EPK0 472 aa9.12□□□□□ -0.95
TPM1-220ENST00000559556 MRPS12O15235 138 aaKnown RBP9.12□□□□□ -0.95
TPM1-220ENST00000559556 OR5G3P0C626 314 aa9.12□□□□□ -0.95
TPM1-220ENST00000559556 CXCL2P19875 107 aa9.12□□□□□ -0.95
TPM1-220ENST00000559556 CDKN1BP46527 198 aa9.12□□□□□ -0.95
TPM1-220ENST00000559556 DLK1P80370 383 aa9.12□□□□□ -0.95
TPM1-220ENST00000559556 IFITM3Q01628 133 aa9.12□□□□□ -0.95
TPM1-220ENST00000559556 RGS21Q2M5E4 152 aa9.12□□□□□ -0.95
TPM1-220ENST00000559556 SSX7Q7RTT5 188 aa9.12□□□□□ -0.95
TPM1-220ENST00000559556 S100A7AQ86SG5 101 aa9.12□□□□□ -0.95
TPM1-220ENST00000559556 C20orf144Q9BQM9 153 aa9.12□□□□□ -0.95
TPM1-220ENST00000559556 LINC00854A0A1B0GVQ3 168 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 FAM240BA0A1B0GVZ2 78 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 PLA2G10O15496 165 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 ADAP1O75689 374 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 CCNKO75909 580 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 PTTG1O95997 202 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 POLR2GP62487 172 aaKnown RBP eCLIP9.11□□□□□ -0.95
TPM1-220ENST00000559556 CLINT1Q14677 625 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 LCN15Q6UWW0 184 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 PATE2Q6UY27 113 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 LINC00612Q8N6U2 182 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 OR10J6PQ8NGY7 276 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 ENKURQ8TC29 256 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 LRRC20Q8TCA0 184 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 RPUSD4Q96CM3 377 aaKnown RBP9.11□□□□□ -0.95
TPM1-220ENST00000559556 ZNF503Q96F45 646 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 SMIM8Q96KF7 97 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 KRTAP1-5Q9BYS1 174 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 ARL6Q9H0F7 186 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 NOP10Q9NPE3 64 aaKnown RBP9.11□□□□□ -0.95
TPM1-220ENST00000559556 PPP1R14DQ9NXH3 145 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 PSENENQ9NZ42 101 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 RNF24Q9Y225 148 aa9.11□□□□□ -0.95
TPM1-220ENST00000559556 C9orf170A2RU37 121 aa9.1□□□□□ -0.95
TPM1-220ENST00000559556 H7BYZ3 331 aa9.1□□□□□ -0.95
TPM1-220ENST00000559556 SSSCA1O60232 199 aa9.1□□□□□ -0.95
TPM1-220ENST00000559556 HTN1P15515 57 aa9.1□□□□□ -0.95
TPM1-220ENST00000559556 TTC32Q5I0X7 151 aa9.1□□□□□ -0.95
TPM1-220ENST00000559556 PXDC1Q5TGL8 231 aa9.1□□□□□ -0.95
TPM1-220ENST00000559556 TMEM14EPQ6UXP3 125 aa9.1□□□□□ -0.95
TPM1-220ENST00000559556 SLC50A1Q9BRV3 221 aa9.1□□□□□ -0.95
TPM1-220ENST00000559556 ARV1Q9H2C2 271 aa9.1□□□□□ -0.95
TPM1-220ENST00000559556 Q9H3A6 140 aa9.1□□□□□ -0.95
TPM1-220ENST00000559556 NPVFQ9HCQ7 196 aa9.1□□□□□ -0.95
TPM1-220ENST00000559556 ZNF331Q9NQX6 463 aaPredicted RBP9.1□□□□□ -0.95
TPM1-220ENST00000559556 HERC1Q15751 4861 aa9.09□□□□□ -0.95
TPM1-220ENST00000559556 SRRM2Q9UQ35 2752 aaKnown RBP9.09□□□□□ -0.95
TPM1-220ENST00000559556 PRB4P10163 310 aaPredicted RBP9.09□□□□□ -0.95
TPM1-220ENST00000559556 RRAS2P62070 204 aaPredicted RBP9.09□□□□□ -0.95
TPM1-220ENST00000559556 TEPPQ6URK8 271 aa9.09□□□□□ -0.95
TPM1-220ENST00000559556 SPATA12Q7Z6I5 190 aa9.09□□□□□ -0.95
TPM1-220ENST00000559556 Q8N1X5 172 aa9.09□□□□□ -0.95
TPM1-220ENST00000559556 RXFP4Q8TDU9 374 aa9.09□□□□□ -0.95
TPM1-220ENST00000559556 GNPNAT1Q96EK6 184 aaPredicted RBP9.09□□□□□ -0.95
TPM1-220ENST00000559556 UPK3BQ9BT76 320 aa9.09□□□□□ -0.95
TPM1-220ENST00000559556 Q9H8V8 135 aa9.09□□□□□ -0.95
TPM1-220ENST00000559556 TRAV26-1A0A087WT03 109 aa9.08□□□□□ -0.96
TPM1-220ENST00000559556 METTL15P1P0C7V9 234 aa9.08□□□□□ -0.96
TPM1-220ENST00000559556 M6PRP20645 277 aa9.08□□□□□ -0.96
TPM1-220ENST00000559556 SLC38A11Q08AI6 406 aa9.08□□□□□ -0.96
TPM1-220ENST00000559556 KIR3DS1Q14943 382 aa9.08□□□□□ -0.96
TPM1-220ENST00000559556 GFI1BQ5VTD9 330 aa9.08□□□□□ -0.96
TPM1-220ENST00000559556 ZNF546Q86UE3 836 aa9.08□□□□□ -0.96
TPM1-220ENST00000559556 MGAT4CQ9UBM8 478 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms