RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 WDR38Q5JTN6 314 aa4.44□□□□□ -1.7
CTDSPL2-206ENST00000559175 CKLFQ9UBR5 152 aa4.44□□□□□ -1.7
CTDSPL2-206ENST00000559175 POLEQ07864 2286 aa4.44□□□□□ -1.7
CTDSPL2-206ENST00000559175 IGHV1-69DA0A0B4J2H0 117 aa4.44□□□□□ -1.7
CTDSPL2-206ENST00000559175 IGKV1-8A0A0C4DH67 115 aa4.44□□□□□ -1.7
CTDSPL2-206ENST00000559175 NDUFC2-KCTD14E9PQ53 114 aa4.44□□□□□ -1.7
CTDSPL2-206ENST00000559175 ZNF324O75467 553 aaPredicted RBP4.44□□□□□ -1.7
CTDSPL2-206ENST00000559175 SRP19P09132 144 aaKnown RBP4.44□□□□□ -1.7
CTDSPL2-206ENST00000559175 COX6A1P12074 109 aa4.44□□□□□ -1.7
CTDSPL2-206ENST00000559175 STPG1Q5TH74 334 aa4.44□□□□□ -1.7
CTDSPL2-206ENST00000559175 RPS4Y2Q8TD47 263 aa4.44□□□□□ -1.7
CTDSPL2-206ENST00000559175 AQP10Q96PS8 301 aa4.44□□□□□ -1.7
CTDSPL2-206ENST00000559175 TRAV12-2A0A075B6T6 113 aa4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 INAFM1C9JVW0 142 aa4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 JTBO76095 146 aa4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 SLC25A14O95258 325 aaPredicted RBP4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 IGLV1-40P01703 118 aa4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 RBP4P02753 201 aa4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 SNRPD3P62318 126 aaKnown RBP4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 CYTL1Q9NRR1 136 aa4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 RABAC1Q9UI14 185 aa4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 ZNF736B4DX44 427 aaPredicted RBP4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 K7N7A8 449 aa4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 GFRA3O60609 400 aa4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 HLA-DPB1P04440 258 aa4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 CRYGAP11844 174 aa4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 LMO4P61968 165 aa4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 WDR86Q86TI4 376 aa4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 PCP2Q8IVA1 136 aa4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 AMN1Q8IY45 258 aa4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 SMIM4Q8WVI0 70 aa4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 HHLA3Q9XRX5 114 aa4.43□□□□□ -1.7
CTDSPL2-206ENST00000559175 TRAV2A0A0B4J234 112 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 NDUFB2O95178 105 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 COX7CP15954 63 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 ZNF20P17024 532 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 CYCSP99999 105 aaKnown RBP4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 ORMDL2Q53FV1 153 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 LINC00479Q96M42 142 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 SRXN1Q9BYN0 137 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 RNF114Q9Y508 228 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 A0A0J9YXV3 536 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 M0R381 172 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 NCR2O95944 276 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 PI3P19957 117 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 AQP1P29972 269 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 LOXL1Q08397 574 aaPredicted RBP4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 PCSK4Q6UW60 755 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 AMTNQ6UX39 209 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 URB1-AS1Q96HZ7 61 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 SHANK2-AS3Q9BTD1 123 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 IGLV5-45A0A087WSX0 123 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 H3BT86 120 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 K7ERJ3 54 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 DAPP51397 102 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 MP68P56378 58 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 CDK5R1Q15078 307 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 MARCH3Q86UD3 253 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 TMEM61Q8N0U2 210 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 DRAM1Q8N682 238 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 NTN5Q8WTR8 489 aaPredicted RBP4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 COPS9Q8WXC6 57 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 TMEM243Q9BU79 118 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 TP73-AS1Q9UF72 201 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 ABCA7Q8IZY2 2146 aa4.42□□□□□ -1.7
CTDSPL2-206ENST00000559175 IGHV3OR16-13A0A075B7E8 117 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 PIPP12273 146 aaPredicted RBP4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 ERCC8Q13216 396 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 LINC00337Q8N6G1 96 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 STAG3L4Q8TBR4 150 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 OR8B2Q96RD0 313 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 TIMM17AQ99595 171 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 CLEC7AQ9BXN2 247 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 TRGV8A0A0C4DH27 118 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 TCL1BO95988 128 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 HLA-DQA1P01909 254 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 HLA-DRB4P13762 266 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 S100A7L2Q5SY68 101 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 TEN1Q86WV5 123 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 OR5C1Q8NGR4 320 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 AQP3Q92482 292 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 SLC25A15Q9Y619 301 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 HLA-DRB4X5D2U9 266 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 IGKCP01834 107 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 LGALS3P17931 250 aaKnown RBP4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 CRYGSP22914 178 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 PSMB8P28062 276 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 EBLN2Q6P2I7 272 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 CEND1Q8N111 149 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 SLC25A45Q8N413 288 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 RNF185Q96GF1 192 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 NXT2Q9NPJ8 142 aaKnown RBP4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 LSM2Q9Y333 95 aaKnown RBP4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 DNAJC15Q9Y5T4 150 aa4.41□□□□□ -1.7
CTDSPL2-206ENST00000559175 MDFIC2A0A1B0GVS7 189 aa4.4□□□□□ -1.7
CTDSPL2-206ENST00000559175 TSHBP01222 138 aa4.4□□□□□ -1.7
CTDSPL2-206ENST00000559175 MRPL2Q5T653 305 aaKnown RBP4.4□□□□□ -1.7
CTDSPL2-206ENST00000559175 OR8A1Q8NGG7 326 aa4.4□□□□□ -1.7
CTDSPL2-206ENST00000559175 FLVCR1-AS1Q8TAF5 88 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms