RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 CST7O76096 145 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 SIX6O95475 246 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 SPP1P10451 314 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 PSMB3P49720 205 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 CAV2P51636 162 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 PLP1P60201 277 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 S100A10P60903 97 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 SELENOTP62341 195 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 GDF5OSQ5U4N7 250 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 MORN3Q6PF18 240 aaPredicted RBP4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 PATE2Q6UY27 113 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 OR11H2Q8NH07 326 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 UHRF2Q96PU4 802 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 SHANK2-AS3Q9BTD1 123 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 TMEM147Q9BVK8 224 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 GGACTQ9BVM4 153 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 SLC25A39Q9BZJ4 359 aaPredicted RBP4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 NPVFQ9HCQ7 196 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 VPS13DQ5THJ4 4388 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 LCE6AA0A183 80 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 PGPEP1LA6NFU8 196 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 ISLRO14498 428 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 GOSR2O14653 212 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 AGPAT2O15120 278 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 PRAF2O60831 178 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 HYPMO75409 117 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 HLA-DRB4P13762 266 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 GALR1P47211 349 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 BCAP31P51572 246 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 TMEM41BQ5BJD5 291 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 CFAP161Q6P656 301 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 ZNF546Q86UE3 836 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 TMEM252Q8N6L7 170 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 Q8NAQ8 132 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 CSNK1G2-AS1Q8NCQ2 148 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 MGST2Q99735 147 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 MARVELD1Q9BSK0 173 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 C11orf68Q9H3H3 251 aaKnown RBP4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 GPN1Q9HCN4 374 aaPredicted RBP4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 LYRM2Q9NU23 88 aaPredicted RBP4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 CLEC5AQ9NY25 188 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 HIGD1AQ9Y241 93 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 HLA-DRB4X5D2U9 266 aa4.37□□□□□ -1.71
CTDSPL2-204ENST00000558966 ZNF705EA8MWA4 302 aaPredicted RBP4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 F6UB75 175 aa4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 MRPS12O15235 138 aaKnown RBP4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 DEFB4AO15263 64 aa4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 OR5G3P0C626 314 aa4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 PVALBP20472 110 aaPredicted RBP4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 ID1P41134 155 aa4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 MEOX2P50222 304 aa4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 SULT1A1P50225 295 aa4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 DEFA1P59665 94 aa4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 DEFA3P59666 94 aa4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 VWC2Q2TAL6 325 aa4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 TMEM217Q8N7C4 229 aa4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 LINC00052Q96N35 136 aa4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 GPR82Q96P67 336 aa4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 RSG1Q9BU20 258 aa4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 ARL6Q9H0F7 186 aa4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 ARV1Q9H2C2 271 aa4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 SAV1Q9H4B6 383 aaPredicted RBP4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 UQCC1Q9NVA1 299 aa4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 WDR83OSQ9Y284 106 aa4.36□□□□□ -1.71
CTDSPL2-204ENST00000558966 TRAV8-2A0A0B4J237 113 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 IGHV4-28A0A0C4DH34 117 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 A0A0J9YX75 114 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 UBE2L5PA0A1B0GUS4 154 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 CXorf65A6NEN9 183 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 IGKV3-20P01619 116 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 RBMY1A1P0DJD3 496 aaKnown RBP4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 RBMY1CP0DJD4 496 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 CAMLGP49069 296 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 H2BFSP57053 126 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 RBMY1FQ15415 496 aaKnown RBP4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 LRRC37A5PQ49AS3 106 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 PXDC1Q5TGL8 231 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 SAMD13Q5VXD3 122 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 MORN5Q5VZ52 161 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 FOXI2Q6ZQN5 318 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 ZNF709Q8N972 641 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 TMEM37Q8WXS4 190 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 KRTAP4-12Q9BQ66 201 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 NMES1Q9C002 83 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 OR5AC2Q9NZP5 309 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 XCL2Q9UBD3 114 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 A0A087X0K7 114 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 A8MTW9 85 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 RPL7P18124 248 aaKnown RBP4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 S100A7P31151 101 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 S100A11P31949 105 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 FXYD7P58549 80 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 ANXA2RQ3ZCQ2 193 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 MIC13Q5XKP0 118 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 LINC00305Q7Z4B0 112 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 STX12Q86Y82 276 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 RNF182Q8N6D2 247 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 SLC35B3Q9H1N7 401 aa4.35□□□□□ -1.71
CTDSPL2-204ENST00000558966 RPRMQ9NS64 109 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms