RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 NRN1Q9NPD7 142 aa13.62□□□□□ -0.23
CLPX-203ENST00000558958 CMYA5Q8N3K9 4069 aa13.61□□□□□ -0.23
CLPX-203ENST00000558958 SLC17A3O00476 420 aa13.61□□□□□ -0.23
CLPX-203ENST00000558958 CD33P20138 364 aa13.61□□□□□ -0.23
CLPX-203ENST00000558958 UBE2G2P60604 165 aa13.61□□□□□ -0.23
CLPX-203ENST00000558958 CD300EQ496F6 205 aaPredicted RBP13.61□□□□□ -0.23
CLPX-203ENST00000558958 MANBALQ9NQG1 85 aa13.61□□□□□ -0.23
CLPX-203ENST00000558958 PAGE4O60829 102 aa13.61□□□□□ -0.23
CLPX-203ENST00000558958 ZNF253O75346 499 aa13.61□□□□□ -0.23
CLPX-203ENST00000558958 IGLV1-51P01701 117 aa13.61□□□□□ -0.23
CLPX-203ENST00000558958 TMEM61Q8N0U2 210 aa13.61□□□□□ -0.23
CLPX-203ENST00000558958 MS4A6AQ9H2W1 248 aa13.61□□□□□ -0.23
CLPX-203ENST00000558958 YTHDF2Q9Y5A9 579 aaKnown RBP13.61□□□□□ -0.23
CLPX-203ENST00000558958 ARL2-SNX15V9GYD0 113 aa13.61□□□□□ -0.23
CLPX-203ENST00000558958 IGKV3-7A0A075B6H7 116 aa13.6□□□□□ -0.23
CLPX-203ENST00000558958 A0A1W2PRE2 83 aa13.6□□□□□ -0.23
CLPX-203ENST00000558958 LINC00862A6NCI5 91 aa13.6□□□□□ -0.23
CLPX-203ENST00000558958 FAM74A7A6NL05 159 aa13.6□□□□□ -0.23
CLPX-203ENST00000558958 TSPAN4O14817 238 aa13.6□□□□□ -0.23
CLPX-203ENST00000558958 IFNA1P01562 189 aa13.6□□□□□ -0.23
CLPX-203ENST00000558958 BCL2P10415 239 aa13.6□□□□□ -0.23
CLPX-203ENST00000558958 RANP62826 216 aaKnown RBP13.6□□□□□ -0.23
CLPX-203ENST00000558958 HAGHQ16775 308 aa13.6□□□□□ -0.23
CLPX-203ENST00000558958 KRTAP21-3Q3LHN1 58 aa13.6□□□□□ -0.23
CLPX-203ENST00000558958 RBPMS2Q6ZRY4 209 aaKnown RBP13.6□□□□□ -0.23
CLPX-203ENST00000558958 FAM210AQ96ND0 272 aa13.6□□□□□ -0.23
CLPX-203ENST00000558958 MED9Q9NWA0 146 aa13.6□□□□□ -0.23
CLPX-203ENST00000558958 TRAV25A0A0B4J276 109 aa13.59□□□□□ -0.23
CLPX-203ENST00000558958 SOCS3O14543 225 aa13.59□□□□□ -0.23
CLPX-203ENST00000558958 INSL3P51460 131 aa13.59□□□□□ -0.23
CLPX-203ENST00000558958 LYPD1Q8N2G4 141 aa13.59□□□□□ -0.23
CLPX-203ENST00000558958 GBGT1Q8N5D6 347 aa13.59□□□□□ -0.23
CLPX-203ENST00000558958 DCANP1Q8TF63 244 aa13.59□□□□□ -0.23
CLPX-203ENST00000558958 MCRIP2Q9BUT9 160 aaKnown RBP13.59□□□□□ -0.23
CLPX-203ENST00000558958 ZNF331Q9NQX6 463 aaPredicted RBP13.59□□□□□ -0.23
CLPX-203ENST00000558958 RBFOX3A6NFN3 312 aa13.58□□□□□ -0.24
CLPX-203ENST00000558958 PSG9Q00887 426 aa13.58□□□□□ -0.24
CLPX-203ENST00000558958 C9orf66Q5T8R8 295 aa13.58□□□□□ -0.24
CLPX-203ENST00000558958 CST9LP1Q5W188 147 aa13.58□□□□□ -0.24
CLPX-203ENST00000558958 OR2K2Q8NGT1 345 aa13.58□□□□□ -0.24
CLPX-203ENST00000558958 RARRES2Q99969 163 aa13.58□□□□□ -0.24
CLPX-203ENST00000558958 SLC50A1Q9BRV3 221 aa13.58□□□□□ -0.24
CLPX-203ENST00000558958 Q9H3A6 140 aa13.58□□□□□ -0.24
CLPX-203ENST00000558958 TRAV8-2A0A0B4J237 113 aa13.57□□□□□ -0.24
CLPX-203ENST00000558958 LOC102723971A0A1B0GUV8 181 aa13.57□□□□□ -0.24
CLPX-203ENST00000558958 IZUMO1RA6ND01 250 aa13.57□□□□□ -0.24
CLPX-203ENST00000558958 GGTLC3B5MD39 225 aa13.57□□□□□ -0.24
CLPX-203ENST00000558958 DNASE2O00115 360 aaPredicted RBP13.57□□□□□ -0.24
CLPX-203ENST00000558958 TAGLN2P37802 199 aaKnown RBP13.57□□□□□ -0.24
CLPX-203ENST00000558958 PAFAH1B2P68402 229 aa13.57□□□□□ -0.24
CLPX-203ENST00000558958 TOR2AQ5JU69 321 aa13.57□□□□□ -0.24
CLPX-203ENST00000558958 ZNF506Q5JVG8 444 aa13.57□□□□□ -0.24
CLPX-203ENST00000558958 SAMD13Q5VXD3 122 aa13.57□□□□□ -0.24
CLPX-203ENST00000558958 EXOC3-AS1Q8N2X6 119 aa13.57□□□□□ -0.24
CLPX-203ENST00000558958 NKX6-2Q9C056 277 aaPredicted RBP13.57□□□□□ -0.24
CLPX-203ENST00000558958 VAX2Q9UIW0 290 aa13.57□□□□□ -0.24
CLPX-203ENST00000558958 TRAV2A0A0B4J234 112 aa13.56□□□□□ -0.24
CLPX-203ENST00000558958 K7EQG2 157 aa13.56□□□□□ -0.24
CLPX-203ENST00000558958 TFPI2P48307 235 aa13.56□□□□□ -0.24
CLPX-203ENST00000558958 SUMO1P63165 101 aaKnown RBP13.56□□□□□ -0.24
CLPX-203ENST00000558958 IGFL4Q6B9Z1 124 aa13.56□□□□□ -0.24
CLPX-203ENST00000558958 WFDC3Q8IUB2 231 aa13.56□□□□□ -0.24
CLPX-203ENST00000558958 C16orf92Q96LL3 132 aa13.56□□□□□ -0.24
CLPX-203ENST00000558958 SPAG8Q99932 426 aaPredicted RBP13.56□□□□□ -0.24
CLPX-203ENST00000558958 EIF5A2Q9GZV4 153 aaKnown RBP13.56□□□□□ -0.24
CLPX-203ENST00000558958 OTORQ9NRC9 128 aa13.56□□□□□ -0.24
CLPX-203ENST00000558958 NOTCH3Q9UM47 2321 aa13.56□□□□□ -0.24
CLPX-203ENST00000558958 RAB19A4D1S5 217 aa13.55□□□□□ -0.24
CLPX-203ENST00000558958 PGPA6NDG6 321 aa13.55□□□□□ -0.24
CLPX-203ENST00000558958 C11orf94C9JXX5 98 aa13.55□□□□□ -0.24
CLPX-203ENST00000558958 ISLRO14498 428 aa13.55□□□□□ -0.24
CLPX-203ENST00000558958 ATP5G3P48201 142 aa13.55□□□□□ -0.24
CLPX-203ENST00000558958 MEF2BQ02080 365 aaPredicted RBP13.55□□□□□ -0.24
CLPX-203ENST00000558958 ICAM4Q14773 271 aa13.55□□□□□ -0.24
CLPX-203ENST00000558958 CCDC28AQ8IWP9 274 aa13.55□□□□□ -0.24
CLPX-203ENST00000558958 TXNDC17Q9BRA2 123 aa13.55□□□□□ -0.24
CLPX-203ENST00000558958 AAMDCQ9H7C9 122 aa13.55□□□□□ -0.24
CLPX-203ENST00000558958 IGLL1P15814 213 aa13.55□□□□□ -0.24
CLPX-203ENST00000558958 HLA-DMBP28068 263 aa13.55□□□□□ -0.24
CLPX-203ENST00000558958 SRSF3P84103 164 aaKnown RBP13.55□□□□□ -0.24
CLPX-203ENST00000558958 PRR31Q5SQ13 230 aa13.55□□□□□ -0.24
CLPX-203ENST00000558958 LCN12Q6JVE5 192 aa13.55□□□□□ -0.24
CLPX-203ENST00000558958 COMMD7Q86VX2 200 aa13.55□□□□□ -0.24
CLPX-203ENST00000558958 RXFP4Q8TDU9 374 aa13.55□□□□□ -0.24
CLPX-203ENST00000558958 CLEC5AQ9NY25 188 aa13.55□□□□□ -0.24
CLPX-203ENST00000558958 PKD1L1Q8TDX9 2849 aa13.54□□□□□ -0.24
CLPX-203ENST00000558958 WIPF1O43516 503 aa13.54□□□□□ -0.24
CLPX-203ENST00000558958 ID1P41134 155 aa13.54□□□□□ -0.24
CLPX-203ENST00000558958 CD81P60033 236 aa13.54□□□□□ -0.24
CLPX-203ENST00000558958 FAM24BQ8N5W8 94 aa13.54□□□□□ -0.24
CLPX-203ENST00000558958 RNF182Q8N6D2 247 aa13.54□□□□□ -0.24
CLPX-203ENST00000558958 ZNF256Q9Y2P7 627 aaPredicted RBP13.54□□□□□ -0.24
CLPX-203ENST00000558958 OR4C46A6NHA9 309 aa13.53□□□□□ -0.24
CLPX-203ENST00000558958 GUCA2BQ16661 112 aa13.53□□□□□ -0.24
CLPX-203ENST00000558958 C20orf173Q96LM9 149 aa13.53□□□□□ -0.24
CLPX-203ENST00000558958 PRELID1Q9Y255 219 aa13.53□□□□□ -0.24
CLPX-203ENST00000558958 M0R3E3 92 aa13.52□□□□□ -0.25
CLPX-203ENST00000558958 SLC25A5P05141 298 aaKnown RBP13.52□□□□□ -0.25
CLPX-203ENST00000558958 PEA15Q15121 130 aa13.52□□□□□ -0.25
CLPX-203ENST00000558958 PSG3Q16557 428 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms