RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 SERF2P84101 59 aa12.94□□□□□ -0.34
TPM1-214ENST00000558544 OR10G4Q8NGN3 311 aa12.94□□□□□ -0.34
TPM1-214ENST00000558544 OR10G9Q8NGN4 311 aa12.94□□□□□ -0.34
TPM1-214ENST00000558544 OR10G7Q8NGN6 311 aa12.94□□□□□ -0.34
TPM1-214ENST00000558544 FAM167A-AS1Q96KT0 104 aa12.94□□□□□ -0.34
TPM1-214ENST00000558544 LINC00052Q96N35 136 aa12.94□□□□□ -0.34
TPM1-214ENST00000558544 ISLRO14498 428 aa12.93□□□□□ -0.34
TPM1-214ENST00000558544 IFNA7P01567 189 aa12.93□□□□□ -0.34
TPM1-214ENST00000558544 SAMD13Q5VXD3 122 aa12.93□□□□□ -0.34
TPM1-214ENST00000558544 IGFL4Q6B9Z1 124 aa12.93□□□□□ -0.34
TPM1-214ENST00000558544 ALKAL2Q6UX46 152 aa12.93□□□□□ -0.34
TPM1-214ENST00000558544 TMEM14CQ9P0S9 112 aa12.93□□□□□ -0.34
TPM1-214ENST00000558544 TRAV8-2A0A0B4J237 113 aa12.92□□□□□ -0.34
TPM1-214ENST00000558544 RBMY1BA6NDE4 496 aaKnown RBP12.92□□□□□ -0.34
TPM1-214ENST00000558544 RBMY1EA6NEQ0 496 aaKnown RBP12.92□□□□□ -0.34
TPM1-214ENST00000558544 H3BQ15 152 aa12.92□□□□□ -0.34
TPM1-214ENST00000558544 RBMY1DP0C7P1 496 aaKnown RBP12.92□□□□□ -0.34
TPM1-214ENST00000558544 LCN15Q6UWW0 184 aa12.92□□□□□ -0.34
TPM1-214ENST00000558544 BAP18Q8IXM2 172 aa12.92□□□□□ -0.34
TPM1-214ENST00000558544 LRRC20Q8TCA0 184 aa12.92□□□□□ -0.34
TPM1-214ENST00000558544 C20orf173Q96LM9 149 aa12.92□□□□□ -0.34
TPM1-214ENST00000558544 HRH4Q9H3N8 390 aa12.92□□□□□ -0.34
TPM1-214ENST00000558544 A0A1W2PPV4 95 aa12.91□□□□□ -0.34
TPM1-214ENST00000558544 KNCNA6PVL3 124 aa12.91□□□□□ -0.34
TPM1-214ENST00000558544 SLC17A3O00476 420 aa12.91□□□□□ -0.34
TPM1-214ENST00000558544 OR7C2O60412 319 aa12.91□□□□□ -0.34
TPM1-214ENST00000558544 MBP02144 154 aa12.91□□□□□ -0.34
TPM1-214ENST00000558544 SPP1P10451 314 aa12.91□□□□□ -0.34
TPM1-214ENST00000558544 CDC34P49427 236 aaPredicted RBP12.91□□□□□ -0.34
TPM1-214ENST00000558544 KHDC3LQ587J8 217 aa12.91□□□□□ -0.34
TPM1-214ENST00000558544 TMEM41BQ5BJD5 291 aa12.91□□□□□ -0.34
TPM1-214ENST00000558544 RNF182Q8N6D2 247 aa12.91□□□□□ -0.34
TPM1-214ENST00000558544 OR51M1Q9H341 326 aa12.91□□□□□ -0.34
TPM1-214ENST00000558544 ZNF586Q9NXT0 402 aa12.91□□□□□ -0.34
TPM1-214ENST00000558544 HMGB3O15347 200 aaKnown RBP12.9□□□□□ -0.34
TPM1-214ENST00000558544 OR10J4P0C629 311 aa12.9□□□□□ -0.34
TPM1-214ENST00000558544 RPL35AP18077 110 aaKnown RBP12.9□□□□□ -0.34
TPM1-214ENST00000558544 HLA-DMBP28068 263 aa12.9□□□□□ -0.34
TPM1-214ENST00000558544 TAS2R45P59539 299 aa12.9□□□□□ -0.34
TPM1-214ENST00000558544 DEFB1P60022 68 aa12.9□□□□□ -0.34
TPM1-214ENST00000558544 RPP25LQ8N5L8 163 aaKnown RBP12.9□□□□□ -0.34
TPM1-214ENST00000558544 PHYHIPLQ96FC7 376 aa12.9□□□□□ -0.34
TPM1-214ENST00000558544 ASCL2Q99929 193 aa12.9□□□□□ -0.34
TPM1-214ENST00000558544 B9D2Q9BPU9 175 aa12.9□□□□□ -0.34
TPM1-214ENST00000558544 PAXXQ9BUH6 204 aa12.9□□□□□ -0.34
TPM1-214ENST00000558544 RPRMQ9NS64 109 aa12.9□□□□□ -0.34
TPM1-214ENST00000558544 COL7A1Q02388 2944 aa12.89□□□□□ -0.35
TPM1-214ENST00000558544 LOC102724200A0A096LPH7 203 aaPredicted RBP12.89□□□□□ -0.35
TPM1-214ENST00000558544 HIST1H1EP10412 219 aaKnown RBP12.89□□□□□ -0.35
TPM1-214ENST00000558544 EIF5AP63241 154 aaKnown RBP12.89□□□□□ -0.35
TPM1-214ENST00000558544 ACTL10Q5JWF8 245 aa12.89□□□□□ -0.35
TPM1-214ENST00000558544 FAM74A1Q5RGS3 127 aa12.89□□□□□ -0.35
TPM1-214ENST00000558544 AKR1C8PQ5T2L2 129 aa12.89□□□□□ -0.35
TPM1-214ENST00000558544 LINC00322Q6ZN03 302 aaPredicted RBP12.89□□□□□ -0.35
TPM1-214ENST00000558544 BLNKQ8WV28 456 aa12.89□□□□□ -0.35
TPM1-214ENST00000558544 TMED6Q8WW62 240 aa12.89□□□□□ -0.35
TPM1-214ENST00000558544 ZNF503Q96F45 646 aa12.89□□□□□ -0.35
TPM1-214ENST00000558544 SLC50A1Q9BRV3 221 aa12.89□□□□□ -0.35
TPM1-214ENST00000558544 ZNF331Q9NQX6 463 aaPredicted RBP12.89□□□□□ -0.35
TPM1-214ENST00000558544 PLA2G2EQ9NZK7 142 aa12.89□□□□□ -0.35
TPM1-214ENST00000558544 GUK1Q16774 197 aa12.88□□□□□ -0.35
TPM1-214ENST00000558544 SBSPONQ8IVN8 264 aa12.88□□□□□ -0.35
TPM1-214ENST00000558544 STHQ8IWL8 128 aa12.88□□□□□ -0.35
TPM1-214ENST00000558544 RNF141Q8WVD5 230 aa12.88□□□□□ -0.35
TPM1-214ENST00000558544 PCNPQ8WW12 178 aaKnown RBP12.88□□□□□ -0.35
TPM1-214ENST00000558544 FXYD5Q96DB9 178 aa12.88□□□□□ -0.35
TPM1-214ENST00000558544 SAT2Q96F10 170 aaPredicted RBP12.88□□□□□ -0.35
TPM1-214ENST00000558544 TRBV19A0A075B6N1 114 aa12.87□□□□□ -0.35
TPM1-214ENST00000558544 UBE2L3P68036 154 aaKnown RBP12.87□□□□□ -0.35
TPM1-214ENST00000558544 HAGHQ16775 308 aa12.87□□□□□ -0.35
TPM1-214ENST00000558544 GDF5OSQ5U4N7 250 aa12.87□□□□□ -0.35
TPM1-214ENST00000558544 SSX7Q7RTT5 188 aa12.87□□□□□ -0.35
TPM1-214ENST00000558544 RAB24Q969Q5 203 aa12.87□□□□□ -0.35
TPM1-214ENST00000558544 ACTR3CQ9C0K3 210 aaPredicted RBP12.87□□□□□ -0.35
TPM1-214ENST00000558544 HUWE1Q7Z6Z7 4374 aaKnown RBP12.87□□□□□ -0.35
TPM1-214ENST00000558544 F6UB75 175 aa12.86□□□□□ -0.35
TPM1-214ENST00000558544 NDUFB4O95168 129 aa12.86□□□□□ -0.35
TPM1-214ENST00000558544 NBEAP1P0C6P0 100 aa12.86□□□□□ -0.35
TPM1-214ENST00000558544 SEC11BP0C7V7 166 aa12.86□□□□□ -0.35
TPM1-214ENST00000558544 PRB4P10163 310 aaPredicted RBP12.86□□□□□ -0.35
TPM1-214ENST00000558544 FOXI2Q6ZQN5 318 aa12.86□□□□□ -0.35
TPM1-214ENST00000558544 ZNF738Q8NE65 137 aa12.86□□□□□ -0.35
TPM1-214ENST00000558544 SAV1Q9H4B6 383 aaPredicted RBP12.86□□□□□ -0.35
TPM1-214ENST00000558544 ZNF253O75346 499 aa12.85□□□□□ -0.35
TPM1-214ENST00000558544 STAG3L2P0CL84 134 aa12.85□□□□□ -0.35
TPM1-214ENST00000558544 STAG3L3P0CL85 134 aa12.85□□□□□ -0.35
TPM1-214ENST00000558544 ARL14EPLP0DKL9 152 aa12.85□□□□□ -0.35
TPM1-214ENST00000558544 PDE6HQ13956 83 aa12.85□□□□□ -0.35
TPM1-214ENST00000558544 ZNF726P1Q15940 193 aa12.85□□□□□ -0.35
TPM1-214ENST00000558544 PSG3Q16557 428 aa12.85□□□□□ -0.35
TPM1-214ENST00000558544 PQLC2Q6ZP29 291 aa12.85□□□□□ -0.35
TPM1-214ENST00000558544 TRPT1Q86TN4 253 aaKnown RBP12.85□□□□□ -0.35
TPM1-214ENST00000558544 TGP01266 2768 aa12.85□□□□□ -0.35
TPM1-214ENST00000558544 CTXND1A0A1B0GTU2 59 aa12.84□□□□□ -0.35
TPM1-214ENST00000558544 NMBP08949 121 aa12.84□□□□□ -0.35
TPM1-214ENST00000558544 HLA-DRB4P13762 266 aa12.84□□□□□ -0.35
TPM1-214ENST00000558544 CLLU1Q5K131 121 aa12.84□□□□□ -0.35
TPM1-214ENST00000558544 HLA-DRB4X5D2U9 266 aa12.84□□□□□ -0.35
TPM1-214ENST00000558544 A0A0J9YX75 114 aa12.83□□□□□ -0.36
TPM1-214ENST00000558544 ZNF705FA8MVS1 300 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms