RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 GRIFINA4D1Z8 144 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 C17orf100A8MU93 164 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 E9PLD3 99 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 K7EN84 100 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 NCR2O95944 276 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 P01737 135 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 IGHV1-46P01743 117 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 IGHV3-7P01780 117 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 SLC25A5P05141 298 aaKnown RBP4.42□□□□□ -1.7
GABPB1-207ENST00000558335 ZNF688P0C7X2 276 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 SAA1P0DJI8 122 aaPredicted RBP4.42□□□□□ -1.7
GABPB1-207ENST00000558335 COL8A1P27658 744 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 HBBP68871 147 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 ZNF415Q09FC8 603 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 CLEC12BQ2HXU8 276 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 LINC01559Q495D7 138 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 Q56UQ5 140 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 PVRIGQ6DKI7 326 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 ZNF474Q6S9Z5 364 aaPredicted RBP4.42□□□□□ -1.7
GABPB1-207ENST00000558335 PIFOQ8TCI5 191 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 TMEM101Q96IK0 257 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 OTORQ9NRC9 128 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 TNFRSF19Q9NS68 423 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 EPDR1Q9UM22 224 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 DNAJC13O75165 2243 aa4.42□□□□□ -1.7
GABPB1-207ENST00000558335 USF3Q68DE3 2245 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 ZNF407Q9C0G0 2248 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 DSCAML1Q8TD84 2053 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 LAMA2P24043 3122 aaKnown RBP4.41□□□□□ -1.7
GABPB1-207ENST00000558335 IGHV3OR15-7A0A075B7D8 119 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 TRAV3A0A0B4J244 114 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 IGHV3-64DA0A0J9YX35 117 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 C2orf70A6NJV1 201 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 CHEK1O14757 476 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 NPFFO15130 113 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 MT-ATP8P03928 68 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 MFAP2P55001 183 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 RIGQ13278 110 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 DEFB109BQ30KR1 87 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 MOB3BQ86TA1 216 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 ZNF329Q86UD4 541 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 APRG1Q8IVJ8 170 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 VKORC1L1Q8N0U8 176 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 KIR3DL3Q8N743 410 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 TMEM116Q8NCL8 245 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 CCL13Q99616 98 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 DCTN5Q9BTE1 182 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 SCNM1Q9BWG6 230 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 SLC25A2Q9BXI2 301 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 RPP21Q9H633 154 aaKnown RBP4.41□□□□□ -1.7
GABPB1-207ENST00000558335 ZNF355PQ9NSJ1 428 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 FZR1Q9UM11 496 aa4.41□□□□□ -1.7
GABPB1-207ENST00000558335 GTF3C1Q12789 2109 aa4.4□□□□□ -1.7
GABPB1-207ENST00000558335 TRAV5A0A0B4J249 113 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 A0A1B0GWB2 263 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 PRSS29PA6NIE9 313 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 TMEM178BH3BS89 294 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 CCDC179H3BU77 68 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 UQCRQO14949 82 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 CRLF1O75462 422 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 NDUFA7O95182 113 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 HLA-DRB4P13762 266 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 GATA2P23769 480 aaPredicted RBP4.4□□□□□ -1.71
GABPB1-207ENST00000558335 CNTFRP26992 372 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 PPIFP30405 207 aaKnown RBP4.4□□□□□ -1.71
GABPB1-207ENST00000558335 RPL27AP46776 148 aaKnown RBP4.4□□□□□ -1.71
GABPB1-207ENST00000558335 CSN1S1P47710 185 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 CAMPP49913 170 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 PDE6HQ13956 83 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 WFDC2Q14508 124 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 ETDBQ3ZM63 59 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 TCF23Q7RTU1 214 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 LINC00305Q7Z4B0 112 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 C1orf159Q96HA4 380 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 FAM167A-AS1Q96KT0 104 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 PRELID3AQ96N28 172 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 JMJD8Q96S16 334 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 RASL11BQ9BPW5 248 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 DYNLRB1Q9NP97 96 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 INSIG2Q9Y5U4 225 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 R4GN57 208 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 HLA-DRB4X5D2U9 266 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 HEATR1Q9H583 2144 aaKnown RBP4.4□□□□□ -1.71
GABPB1-207ENST00000558335 SDK1Q7Z5N4 2213 aa4.4□□□□□ -1.71
GABPB1-207ENST00000558335 REV3LO60673 3130 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 TRBV20-1A0A075B6N2 111 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 A0A087X0K7 114 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 IGHV1-24A0A0C4DH33 117 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 TINCRA0A1B0GVN0 87 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 OOSP1A8MZH6 123 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 SHISA9B4DS77 424 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 J3QLI3 93 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 BMPR1BO00238 502 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 ZNHIT1O43257 154 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 DUSP14O95147 198 aaKnown RBP4.39□□□□□ -1.71
GABPB1-207ENST00000558335 LEPROTL1O95214 131 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 LTAP01374 205 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 IGLV2-8P01709 118 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 RPL7P18124 248 aaKnown RBP4.39□□□□□ -1.71
GABPB1-207ENST00000558335 MYCNOSP40205 109 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms