RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 IGLC2P0DOY2 106 aa7.8□□□□□ -1.16
LRRC28-204ENST00000558172 PDE6HQ13956 83 aa7.8□□□□□ -1.16
LRRC28-204ENST00000558172 ODF3L2Q3SX64 289 aa7.8□□□□□ -1.16
LRRC28-204ENST00000558172 C17orf77Q96MU5 243 aa7.8□□□□□ -1.16
LRRC28-204ENST00000558172 UBQLN2Q9UHD9 624 aa7.8□□□□□ -1.16
LRRC28-204ENST00000558172 FBN3Q75N90 2809 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 CTXND1A0A1B0GTU2 59 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 H3BQ15 152 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 OR7C2O60412 319 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 NBEAP1P0C6P0 100 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 ZNF688P0C7X2 276 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 STAG3L2P0CL84 134 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 STAG3L3P0CL85 134 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 RAB5CP51148 216 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 NKX2-5P52952 324 aaPredicted RBP7.79□□□□□ -1.16
LRRC28-204ENST00000558172 DEFB131AP59861 70 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 PSG9Q00887 426 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 DEFB121Q5J5C9 76 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 PSMG4Q5JS54 123 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 DPPA3Q6W0C5 159 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 FAM24BQ8N5W8 94 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 DEFB125Q8N687 156 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 MRAPQ8TCY5 172 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 RNF141Q8WVD5 230 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 RAB24Q969Q5 203 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 SAT2Q96F10 170 aaPredicted RBP7.79□□□□□ -1.16
LRRC28-204ENST00000558172 TUBA4BQ9H853 241 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 ZNF586Q9NXT0 402 aa7.79□□□□□ -1.16
LRRC28-204ENST00000558172 TRBV19A0A075B6N1 114 aa7.78□□□□□ -1.16
LRRC28-204ENST00000558172 IGHV4-30-4P0DP06 118 aa7.78□□□□□ -1.16
LRRC28-204ENST00000558172 PYYP10082 97 aa7.78□□□□□ -1.16
LRRC28-204ENST00000558172 TMED6Q8WW62 240 aa7.78□□□□□ -1.16
LRRC28-204ENST00000558172 FXYD5Q96DB9 178 aa7.78□□□□□ -1.16
LRRC28-204ENST00000558172 PHYHIPLQ96FC7 376 aa7.78□□□□□ -1.16
LRRC28-204ENST00000558172 LINC00052Q96N35 136 aa7.78□□□□□ -1.16
LRRC28-204ENST00000558172 ZNF331Q9NQX6 463 aaPredicted RBP7.78□□□□□ -1.16
LRRC28-204ENST00000558172 TRAV8-2A0A0B4J237 113 aa7.77□□□□□ -1.17
LRRC28-204ENST00000558172 CXorf1O96002 111 aa7.77□□□□□ -1.17
LRRC28-204ENST00000558172 OR10J4P0C629 311 aa7.77□□□□□ -1.17
LRRC28-204ENST00000558172 UBE2L3P68036 154 aaKnown RBP7.77□□□□□ -1.17
LRRC28-204ENST00000558172 PSG3Q16557 428 aa7.77□□□□□ -1.17
LRRC28-204ENST00000558172 APRG1Q8IVJ8 170 aa7.77□□□□□ -1.17
LRRC28-204ENST00000558172 LYPD1Q8N2G4 141 aa7.77□□□□□ -1.17
LRRC28-204ENST00000558172 BLNKQ8WV28 456 aa7.77□□□□□ -1.17
LRRC28-204ENST00000558172 ZNF503Q96F45 646 aa7.77□□□□□ -1.17
LRRC28-204ENST00000558172 AAMDCQ9H7C9 122 aa7.77□□□□□ -1.17
LRRC28-204ENST00000558172 SRD5A3Q9H8P0 318 aa7.77□□□□□ -1.17
LRRC28-204ENST00000558172 TMEM167BQ9NRX6 74 aa7.77□□□□□ -1.17
LRRC28-204ENST00000558172 PRELID1Q9Y255 219 aa7.77□□□□□ -1.17
LRRC28-204ENST00000558172 LOC102724200A0A096LPH7 203 aaPredicted RBP7.76□□□□□ -1.17
LRRC28-204ENST00000558172 HMGB3O15347 200 aaKnown RBP7.76□□□□□ -1.17
LRRC28-204ENST00000558172 SNRPCP09234 159 aaKnown RBP7.76□□□□□ -1.17
LRRC28-204ENST00000558172 ARL14EPLP0DKL9 152 aa7.76□□□□□ -1.17
LRRC28-204ENST00000558172 SULT1A2P50226 295 aa7.76□□□□□ -1.17
LRRC28-204ENST00000558172 ZNF726P1Q15940 193 aa7.76□□□□□ -1.17
LRRC28-204ENST00000558172 EBLN2Q6P2I7 272 aa7.76□□□□□ -1.17
LRRC28-204ENST00000558172 FOXI2Q6ZQN5 318 aa7.76□□□□□ -1.17
LRRC28-204ENST00000558172 SUN5Q8TC36 379 aa7.76□□□□□ -1.17
LRRC28-204ENST00000558172 MBD3L1Q8WWY6 194 aa7.76□□□□□ -1.17
LRRC28-204ENST00000558172 WFDC10AQ9H1F0 79 aa7.76□□□□□ -1.17
LRRC28-204ENST00000558172 PLA2G2EQ9NZK7 142 aa7.76□□□□□ -1.17
LRRC28-204ENST00000558172 MEGF8Q7Z7M0 2845 aa7.76□□□□□ -1.17
LRRC28-204ENST00000558172 H3BTX0 84 aa7.75□□□□□ -1.17
LRRC28-204ENST00000558172 SLC17A3O00476 420 aa7.75□□□□□ -1.17
LRRC28-204ENST00000558172 EIF3GO75821 320 aaKnown RBP eCLIP7.75□□□□□ -1.17
LRRC28-204ENST00000558172 NDUFB4O95168 129 aa7.75□□□□□ -1.17
LRRC28-204ENST00000558172 FRMD6-AS1P0C7T7 363 aa7.75□□□□□ -1.17
LRRC28-204ENST00000558172 GCHFRP30047 84 aa7.75□□□□□ -1.17
LRRC28-204ENST00000558172 FAM74A1Q5RGS3 127 aa7.75□□□□□ -1.17
LRRC28-204ENST00000558172 IGFL4Q6B9Z1 124 aa7.75□□□□□ -1.17
LRRC28-204ENST00000558172 LINC00322Q6ZN03 302 aaPredicted RBP7.75□□□□□ -1.17
LRRC28-204ENST00000558172 SSX7Q7RTT5 188 aa7.75□□□□□ -1.17
LRRC28-204ENST00000558172 STHQ8IWL8 128 aa7.75□□□□□ -1.17
LRRC28-204ENST00000558172 RNF182Q8N6D2 247 aa7.75□□□□□ -1.17
LRRC28-204ENST00000558172 ZNF738Q8NE65 137 aa7.75□□□□□ -1.17
LRRC28-204ENST00000558172 FAM213BQ8TBF2 198 aa7.75□□□□□ -1.17
LRRC28-204ENST00000558172 MRPL53Q96EL3 112 aaKnown RBP7.75□□□□□ -1.17
LRRC28-204ENST00000558172 C20orf173Q96LM9 149 aa7.75□□□□□ -1.17
LRRC28-204ENST00000558172 CITED4Q96RK1 184 aa7.75□□□□□ -1.17
LRRC28-204ENST00000558172 SAV1Q9H4B6 383 aaPredicted RBP7.75□□□□□ -1.17
LRRC28-204ENST00000558172 BOLA1Q9Y3E2 137 aa7.75□□□□□ -1.17
LRRC28-204ENST00000558172 KIR2DL5BA0A0G2JN68 375 aa7.74□□□□□ -1.17
LRRC28-204ENST00000558172 KIR2DL5BA0A0G2JPC4 375 aa7.74□□□□□ -1.17
LRRC28-204ENST00000558172 MAP1LC3B2A6NCE7 125 aa7.74□□□□□ -1.17
LRRC28-204ENST00000558172 TEX46H3BTG2 121 aa7.74□□□□□ -1.17
LRRC28-204ENST00000558172 BOLA2-SMG1P6H3BVE0 249 aa7.74□□□□□ -1.17
LRRC28-204ENST00000558172 DUSP14O95147 198 aaKnown RBP7.74□□□□□ -1.17
LRRC28-204ENST00000558172 H2AFB1P0C5Y9 115 aa7.74□□□□□ -1.17
LRRC28-204ENST00000558172 HLA-DRB4P13762 266 aa7.74□□□□□ -1.17
LRRC28-204ENST00000558172 APOC4P55056 127 aa7.74□□□□□ -1.17
LRRC28-204ENST00000558172 RANP62826 216 aaKnown RBP7.74□□□□□ -1.17
LRRC28-204ENST00000558172 ZNF124Q15973 351 aa7.74□□□□□ -1.17
LRRC28-204ENST00000558172 ACTL10Q5JWF8 245 aa7.74□□□□□ -1.17
LRRC28-204ENST00000558172 KIR2DL5AQ8N109 375 aa7.74□□□□□ -1.17
LRRC28-204ENST00000558172 KIR2DL5BQ8NHK3 375 aa7.74□□□□□ -1.17
LRRC28-204ENST00000558172 RXFP4Q8TDU9 374 aa7.74□□□□□ -1.17
LRRC28-204ENST00000558172 RPUSD4Q96CM3 377 aaKnown RBP7.74□□□□□ -1.17
LRRC28-204ENST00000558172 CLUHP3Q96NS8 147 aa7.74□□□□□ -1.17
LRRC28-204ENST00000558172 MAP1LC3BQ9GZQ8 125 aa7.74□□□□□ -1.17
LRRC28-204ENST00000558172 HLA-DRB4X5D2U9 266 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms