RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 SERF2P84101 59 aa18.84■□□□□ 0.61
SMAD6-202ENST00000557916 FAM167A-AS1Q96KT0 104 aa18.84■□□□□ 0.61
SMAD6-202ENST00000557916 C1QBP02746 253 aa18.83■□□□□ 0.61
SMAD6-202ENST00000557916 TM2D3Q9BRN9 247 aa18.83■□□□□ 0.61
SMAD6-202ENST00000557916 RPRMQ9NS64 109 aa18.83■□□□□ 0.61
SMAD6-202ENST00000557916 COL7A1Q02388 2944 aa18.83■□□□□ 0.61
SMAD6-202ENST00000557916 PYYP10082 97 aa18.83■□□□□ 0.6
SMAD6-202ENST00000557916 DEFB1P60022 68 aa18.83■□□□□ 0.6
SMAD6-202ENST00000557916 GUK1Q16774 197 aa18.83■□□□□ 0.6
SMAD6-202ENST00000557916 RNF182Q8N6D2 247 aa18.83■□□□□ 0.6
SMAD6-202ENST00000557916 OR10G4Q8NGN3 311 aa18.83■□□□□ 0.6
SMAD6-202ENST00000557916 OR10G9Q8NGN4 311 aa18.83■□□□□ 0.6
SMAD6-202ENST00000557916 OR10G7Q8NGN6 311 aa18.83■□□□□ 0.6
SMAD6-202ENST00000557916 ZNF331Q9NQX6 463 aaPredicted RBP18.83■□□□□ 0.6
SMAD6-202ENST00000557916 ZNF586Q9NXT0 402 aa18.83■□□□□ 0.6
SMAD6-202ENST00000557916 KIR2DL5BA0A0G2JN68 375 aa18.82■□□□□ 0.6
SMAD6-202ENST00000557916 KIR2DL5BA0A0G2JPC4 375 aa18.82■□□□□ 0.6
SMAD6-202ENST00000557916 KANTRA0A1W2PQU2 76 aa18.82■□□□□ 0.6
SMAD6-202ENST00000557916 HIST1H1EP10412 219 aaKnown RBP18.82■□□□□ 0.6
SMAD6-202ENST00000557916 TRPT1Q86TN4 253 aaKnown RBP18.82■□□□□ 0.6
SMAD6-202ENST00000557916 KIR2DL5AQ8N109 375 aa18.82■□□□□ 0.6
SMAD6-202ENST00000557916 KIR2DL5BQ8NHK3 375 aa18.82■□□□□ 0.6
SMAD6-202ENST00000557916 SLC50A1Q9BRV3 221 aa18.82■□□□□ 0.6
SMAD6-202ENST00000557916 OR51M1Q9H341 326 aa18.82■□□□□ 0.6
SMAD6-202ENST00000557916 ZMAT4Q9H898 229 aa18.82■□□□□ 0.6
SMAD6-202ENST00000557916 A0A1W2PPV4 95 aa18.81■□□□□ 0.6
SMAD6-202ENST00000557916 SLC17A3O00476 420 aa18.81■□□□□ 0.6
SMAD6-202ENST00000557916 BCL2L11O43521 198 aa18.81■□□□□ 0.6
SMAD6-202ENST00000557916 MBP02144 154 aa18.81■□□□□ 0.6
SMAD6-202ENST00000557916 FAM122CQ6P4D5 195 aa18.81■□□□□ 0.6
SMAD6-202ENST00000557916 FOXI2Q6ZQN5 318 aa18.81■□□□□ 0.6
SMAD6-202ENST00000557916 TMUB2Q71RG4 321 aa18.81■□□□□ 0.6
SMAD6-202ENST00000557916 SAT2Q96F10 170 aaPredicted RBP18.81■□□□□ 0.6
SMAD6-202ENST00000557916 OR7C2O60412 319 aa18.8■□□□□ 0.6
SMAD6-202ENST00000557916 TAS2R45P59539 299 aa18.8■□□□□ 0.6
SMAD6-202ENST00000557916 CD300CQ08708 224 aa18.8■□□□□ 0.6
SMAD6-202ENST00000557916 SPATA25Q9BR10 227 aa18.8■□□□□ 0.6
SMAD6-202ENST00000557916 PAXXQ9BUH6 204 aa18.8■□□□□ 0.6
SMAD6-202ENST00000557916 CSTL1Q9H114 145 aa18.8■□□□□ 0.6
SMAD6-202ENST00000557916 SAV1Q9H4B6 383 aaPredicted RBP18.8■□□□□ 0.6
SMAD6-202ENST00000557916 TRBV19A0A075B6N1 114 aa18.79■□□□□ 0.6
SMAD6-202ENST00000557916 H3BMM0 161 aa18.79■□□□□ 0.6
SMAD6-202ENST00000557916 UBE2CO00762 179 aa18.79■□□□□ 0.6
SMAD6-202ENST00000557916 PFDN1O60925 122 aa18.79■□□□□ 0.6
SMAD6-202ENST00000557916 HLA-DRB4P13762 266 aa18.79■□□□□ 0.6
SMAD6-202ENST00000557916 HLA-DMBP28068 263 aa18.79■□□□□ 0.6
SMAD6-202ENST00000557916 KHDC3LQ587J8 217 aa18.79■□□□□ 0.6
SMAD6-202ENST00000557916 GDF5OSQ5U4N7 250 aa18.79■□□□□ 0.6
SMAD6-202ENST00000557916 EBLN2Q6P2I7 272 aa18.79■□□□□ 0.6
SMAD6-202ENST00000557916 HYLS1Q96M11 299 aa18.79■□□□□ 0.6
SMAD6-202ENST00000557916 ZNF471Q9BX82 626 aaPredicted RBP18.79■□□□□ 0.6
SMAD6-202ENST00000557916 HLA-DRB4X5D2U9 266 aa18.79■□□□□ 0.6
SMAD6-202ENST00000557916 NBEAL2Q6ZNJ1 2754 aa18.79■□□□□ 0.6
SMAD6-202ENST00000557916 F6UB75 175 aa18.78■□□□□ 0.6
SMAD6-202ENST00000557916 EIF3GO75821 320 aaKnown RBP eCLIP18.78■□□□□ 0.6
SMAD6-202ENST00000557916 PSG3Q16557 428 aa18.78■□□□□ 0.6
SMAD6-202ENST00000557916 RPP25LQ8N5L8 163 aaKnown RBP18.78■□□□□ 0.6
SMAD6-202ENST00000557916 ZNF738Q8NE65 137 aa18.78■□□□□ 0.6
SMAD6-202ENST00000557916 BLNKQ8WV28 456 aa18.78■□□□□ 0.6
SMAD6-202ENST00000557916 RNF141Q8WVD5 230 aa18.78■□□□□ 0.6
SMAD6-202ENST00000557916 ZNF253O75346 499 aa18.77■□□□□ 0.6
SMAD6-202ENST00000557916 OR10J4P0C629 311 aa18.77■□□□□ 0.6
SMAD6-202ENST00000557916 LGALSLQ3ZCW2 172 aaPredicted RBP18.77■□□□□ 0.6
SMAD6-202ENST00000557916 TMEM41BQ5BJD5 291 aa18.77■□□□□ 0.6
SMAD6-202ENST00000557916 FXYD5Q96DB9 178 aa18.77■□□□□ 0.6
SMAD6-202ENST00000557916 ZNF503Q96F45 646 aa18.77■□□□□ 0.6
SMAD6-202ENST00000557916 AGRNO00468 2067 aa18.77■□□□□ 0.6
SMAD6-202ENST00000557916 A0A0J9YX75 114 aa18.76■□□□□ 0.59
SMAD6-202ENST00000557916 NBEAP1P0C6P0 100 aa18.76■□□□□ 0.59
SMAD6-202ENST00000557916 SPP1P10451 314 aa18.76■□□□□ 0.59
SMAD6-202ENST00000557916 CDC34P49427 236 aaPredicted RBP18.76■□□□□ 0.59
SMAD6-202ENST00000557916 PDE6HQ13956 83 aa18.76■□□□□ 0.59
SMAD6-202ENST00000557916 RETNQ9HD89 108 aa18.76■□□□□ 0.59
SMAD6-202ENST00000557916 CLEC5AQ9NY25 188 aa18.76■□□□□ 0.59
SMAD6-202ENST00000557916 NDUFB4O95168 129 aa18.75■□□□□ 0.59
SMAD6-202ENST00000557916 U3KQK5 164 aa18.75■□□□□ 0.59
SMAD6-202ENST00000557916 CA1P00915 261 aaPredicted RBP18.74■□□□□ 0.59
SMAD6-202ENST00000557916 IGKV3-20P01619 116 aa18.74■□□□□ 0.59
SMAD6-202ENST00000557916 UBE2L3P68036 154 aaKnown RBP18.74■□□□□ 0.59
SMAD6-202ENST00000557916 MORN3Q6PF18 240 aaPredicted RBP18.74■□□□□ 0.59
SMAD6-202ENST00000557916 Q6ZWC4 215 aa18.74■□□□□ 0.59
SMAD6-202ENST00000557916 OR4B1Q8NGF8 309 aa18.74■□□□□ 0.59
SMAD6-202ENST00000557916 RCHY1Q96PM5 261 aa18.74■□□□□ 0.59
SMAD6-202ENST00000557916 HMGB3O15347 200 aaKnown RBP18.74■□□□□ 0.59
SMAD6-202ENST00000557916 EIF5AP63241 154 aaKnown RBP18.74■□□□□ 0.59
SMAD6-202ENST00000557916 PSG9Q00887 426 aa18.74■□□□□ 0.59
SMAD6-202ENST00000557916 ZFP69Q49AA0 526 aa18.74■□□□□ 0.59
SMAD6-202ENST00000557916 AKR1C8PQ5T2L2 129 aa18.74■□□□□ 0.59
SMAD6-202ENST00000557916 PQLC2Q6ZP29 291 aa18.74■□□□□ 0.59
SMAD6-202ENST00000557916 RAB24Q969Q5 203 aa18.74■□□□□ 0.59
SMAD6-202ENST00000557916 RPUSD4Q96CM3 377 aaKnown RBP18.74■□□□□ 0.59
SMAD6-202ENST00000557916 ACTR3CQ9C0K3 210 aaPredicted RBP18.74■□□□□ 0.59
SMAD6-202ENST00000557916 HUWE1Q7Z6Z7 4374 aaKnown RBP18.73■□□□□ 0.59
SMAD6-202ENST00000557916 DEFB135Q30KP9 77 aa18.73■□□□□ 0.59
SMAD6-202ENST00000557916 ZNF705FA8MVS1 300 aaPredicted RBP18.72■□□□□ 0.59
SMAD6-202ENST00000557916 ZNF705DP0CH99 300 aaPredicted RBP18.72■□□□□ 0.59
SMAD6-202ENST00000557916 ZNF705BP0CI00 300 aaPredicted RBP18.72■□□□□ 0.59
SMAD6-202ENST00000557916 PRB4P10163 310 aaPredicted RBP18.72■□□□□ 0.59
SMAD6-202ENST00000557916 NUTF2P61970 127 aaKnown RBP18.72■□□□□ 0.59
SMAD6-202ENST00000557916 DUSP14O95147 198 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms