RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 RNF141Q8WVD5 230 aa11.13□□□□□ -0.63
SCFD1-224ENST00000557713 C16orf74Q96GX8 76 aa11.13□□□□□ -0.63
SCFD1-224ENST00000557713 SMIM8Q96KF7 97 aa11.13□□□□□ -0.63
SCFD1-224ENST00000557713 PPP1R14DQ9NXH3 145 aa11.13□□□□□ -0.63
SCFD1-224ENST00000557713 TIMM8BQ9Y5J9 83 aaPredicted RBP11.13□□□□□ -0.63
SCFD1-224ENST00000557713 C9orf170A2RU37 121 aa11.12□□□□□ -0.63
SCFD1-224ENST00000557713 K7EPK0 472 aa11.12□□□□□ -0.63
SCFD1-224ENST00000557713 CCNKO75909 580 aa11.12□□□□□ -0.63
SCFD1-224ENST00000557713 PRB4P10163 310 aaPredicted RBP11.12□□□□□ -0.63
SCFD1-224ENST00000557713 HTN1P15515 57 aa11.12□□□□□ -0.63
SCFD1-224ENST00000557713 ZNF493Q6ZR52 646 aa11.12□□□□□ -0.63
SCFD1-224ENST00000557713 LRRC20Q8TCA0 184 aa11.12□□□□□ -0.63
SCFD1-224ENST00000557713 RPUSD4Q96CM3 377 aaKnown RBP11.12□□□□□ -0.63
SCFD1-224ENST00000557713 NPVFQ9HCQ7 196 aa11.12□□□□□ -0.63
SCFD1-224ENST00000557713 FNDC10F2Z333 226 aa11.11□□□□□ -0.63
SCFD1-224ENST00000557713 NOL3O60936 208 aaKnown RBP11.11□□□□□ -0.63
SCFD1-224ENST00000557713 CDKN1BP46527 198 aa11.11□□□□□ -0.63
SCFD1-224ENST00000557713 DLK1P80370 383 aa11.11□□□□□ -0.63
SCFD1-224ENST00000557713 TMEM14EPQ6UXP3 125 aa11.11□□□□□ -0.63
SCFD1-224ENST00000557713 SSX7Q7RTT5 188 aa11.11□□□□□ -0.63
SCFD1-224ENST00000557713 RNASE8Q8TDE3 154 aaKnown RBP11.11□□□□□ -0.63
SCFD1-224ENST00000557713 ARL6Q9H0F7 186 aa11.11□□□□□ -0.63
SCFD1-224ENST00000557713 ARV1Q9H2C2 271 aa11.11□□□□□ -0.63
SCFD1-224ENST00000557713 NOP10Q9NPE3 64 aaKnown RBP11.11□□□□□ -0.63
SCFD1-224ENST00000557713 APOBP04114 4563 aaKnown RBP11.1□□□□□ -0.63
SCFD1-224ENST00000557713 RRAS2P62070 204 aaPredicted RBP11.1□□□□□ -0.63
SCFD1-224ENST00000557713 S100A7AQ86SG5 101 aa11.1□□□□□ -0.63
SCFD1-224ENST00000557713 CCDC190Q86UF4 302 aa11.1□□□□□ -0.63
SCFD1-224ENST00000557713 TMEM263Q8WUH6 116 aaKnown RBP11.1□□□□□ -0.63
SCFD1-224ENST00000557713 DNAH5Q8TE73 4624 aa11.09□□□□□ -0.63
SCFD1-224ENST00000557713 H7BYZ3 331 aa11.09□□□□□ -0.63
SCFD1-224ENST00000557713 SSSCA1O60232 199 aa11.09□□□□□ -0.63
SCFD1-224ENST00000557713 CXCL2P19875 107 aa11.09□□□□□ -0.63
SCFD1-224ENST00000557713 ANXA7P20073 488 aaKnown RBP11.09□□□□□ -0.63
SCFD1-224ENST00000557713 CLINT1Q14677 625 aa11.09□□□□□ -0.63
SCFD1-224ENST00000557713 KIR3DS1Q14943 382 aa11.09□□□□□ -0.63
SCFD1-224ENST00000557713 PXDC1Q5TGL8 231 aa11.09□□□□□ -0.63
SCFD1-224ENST00000557713 TEPPQ6URK8 271 aa11.09□□□□□ -0.63
SCFD1-224ENST00000557713 LINC00612Q8N6U2 182 aa11.09□□□□□ -0.63
SCFD1-224ENST00000557713 MAPKAPK5-AS1Q8N8E1 139 aa11.09□□□□□ -0.63
SCFD1-224ENST00000557713 C20orf144Q9BQM9 153 aa11.09□□□□□ -0.63
SCFD1-224ENST00000557713 Q9H8V8 135 aa11.09□□□□□ -0.63
SCFD1-224ENST00000557713 ZNF331Q9NQX6 463 aaPredicted RBP11.09□□□□□ -0.63
SCFD1-224ENST00000557713 RNF24Q9Y225 148 aa11.09□□□□□ -0.63
SCFD1-224ENST00000557713 METTL15P1P0C7V9 234 aa11.08□□□□□ -0.64
SCFD1-224ENST00000557713 SLC38A11Q08AI6 406 aa11.08□□□□□ -0.64
SCFD1-224ENST00000557713 C4orf46Q504U0 113 aa11.08□□□□□ -0.64
SCFD1-224ENST00000557713 LCN15Q6UWW0 184 aa11.08□□□□□ -0.64
SCFD1-224ENST00000557713 OR10P1Q8NGE3 313 aa11.08□□□□□ -0.64
SCFD1-224ENST00000557713 ZNF503Q96F45 646 aa11.08□□□□□ -0.64
SCFD1-224ENST00000557713 PRAC2D3DTV9 90 aa11.07□□□□□ -0.64
SCFD1-224ENST00000557713 NDUFB6O95139 128 aa11.07□□□□□ -0.64
SCFD1-224ENST00000557713 SNRPCP09234 159 aaKnown RBP11.07□□□□□ -0.64
SCFD1-224ENST00000557713 OR4E1P0C645 316 aa11.07□□□□□ -0.64
SCFD1-224ENST00000557713 S100A5P33763 92 aa11.07□□□□□ -0.64
SCFD1-224ENST00000557713 OR5I1Q13606 314 aa11.07□□□□□ -0.64
SCFD1-224ENST00000557713 LCE2DQ5TA82 110 aaPredicted RBP11.07□□□□□ -0.64
SCFD1-224ENST00000557713 LINC00305Q7Z4B0 112 aa11.07□□□□□ -0.64
SCFD1-224ENST00000557713 OR10J6PQ8NGY7 276 aa11.07□□□□□ -0.64
SCFD1-224ENST00000557713 PARD6GQ9BYG4 376 aaPredicted RBP11.07□□□□□ -0.64
SCFD1-224ENST00000557713 KRTAP1-5Q9BYS1 174 aa11.07□□□□□ -0.64
SCFD1-224ENST00000557713 MGAT4CQ9UBM8 478 aa11.07□□□□□ -0.64
SCFD1-224ENST00000557713 FLVCR2Q9UPI3 526 aa11.07□□□□□ -0.64
SCFD1-224ENST00000557713 TRAV26-1A0A087WT03 109 aa11.06□□□□□ -0.64
SCFD1-224ENST00000557713 GOSR2O14653 212 aa11.06□□□□□ -0.64
SCFD1-224ENST00000557713 HOXA5P20719 270 aa11.06□□□□□ -0.64
SCFD1-224ENST00000557713 TAS2R30P59541 319 aa11.06□□□□□ -0.64
SCFD1-224ENST00000557713 ARL16Q0P5N6 197 aa11.06□□□□□ -0.64
SCFD1-224ENST00000557713 ZBTB8BQ8NAP8 495 aaPredicted RBP11.06□□□□□ -0.64
SCFD1-224ENST00000557713 RXFP4Q8TDU9 374 aa11.06□□□□□ -0.64
SCFD1-224ENST00000557713 TMEM37Q8WXS4 190 aa11.06□□□□□ -0.64
SCFD1-224ENST00000557713 GNPNAT1Q96EK6 184 aaPredicted RBP11.06□□□□□ -0.64
SCFD1-224ENST00000557713 SLC50A1Q9BRV3 221 aa11.06□□□□□ -0.64
SCFD1-224ENST00000557713 NAP1L6A6NFF2 107 aa11.05□□□□□ -0.64
SCFD1-224ENST00000557713 ZNF701M0R085 212 aaPredicted RBP11.05□□□□□ -0.64
SCFD1-224ENST00000557713 AGPAT2O15120 278 aa11.05□□□□□ -0.64
SCFD1-224ENST00000557713 TSC22D2O75157 780 aa11.05□□□□□ -0.64
SCFD1-224ENST00000557713 M6PRP20645 277 aa11.05□□□□□ -0.64
SCFD1-224ENST00000557713 ESRGQ1W209 222 aa11.05□□□□□ -0.64
SCFD1-224ENST00000557713 GFI1BQ5VTD9 330 aa11.05□□□□□ -0.64
SCFD1-224ENST00000557713 SPATA12Q7Z6I5 190 aa11.05□□□□□ -0.64
SCFD1-224ENST00000557713 ZNF546Q86UE3 836 aa11.05□□□□□ -0.64
SCFD1-224ENST00000557713 BPIFA4PQ86YQ2 179 aa11.05□□□□□ -0.64
SCFD1-224ENST00000557713 CCDC28AQ8IWP9 274 aa11.05□□□□□ -0.64
SCFD1-224ENST00000557713 Q8N1X5 172 aa11.05□□□□□ -0.64
SCFD1-224ENST00000557713 UPK3BQ9BT76 320 aa11.05□□□□□ -0.64
SCFD1-224ENST00000557713 SRRQ9GZT4 340 aa11.05□□□□□ -0.64
SCFD1-224ENST00000557713 Q9H3A6 140 aa11.05□□□□□ -0.64
SCFD1-224ENST00000557713 A0A0J9YY99 117 aa11.04□□□□□ -0.64
SCFD1-224ENST00000557713 H3BNG1 76 aa11.04□□□□□ -0.64
SCFD1-224ENST00000557713 SLC17A3O00476 420 aa11.04□□□□□ -0.64
SCFD1-224ENST00000557713 BAK1Q16611 211 aa11.04□□□□□ -0.64
SCFD1-224ENST00000557713 IAH1Q2TAA2 248 aaPredicted RBP11.04□□□□□ -0.64
SCFD1-224ENST00000557713 MORN5Q5VZ52 161 aa11.04□□□□□ -0.64
SCFD1-224ENST00000557713 SAT2Q96F10 170 aaPredicted RBP11.04□□□□□ -0.64
SCFD1-224ENST00000557713 GGACTQ9BVM4 153 aa11.04□□□□□ -0.64
SCFD1-224ENST00000557713 RCL1Q9Y2P8 373 aaKnown RBP11.04□□□□□ -0.64
SCFD1-224ENST00000557713 GAGE12BA1L429 117 aa11.03□□□□□ -0.64
SCFD1-224ENST00000557713 C7orf66A4D0T2 115 aa11.03□□□□□ -0.64
SCFD1-224ENST00000557713 H3BQ15 152 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms