RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 TMEM191AQ9H0A3 160 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 RERGLQ9H628 205 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 OTORQ9NRC9 128 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 CBLN4Q9NTU7 201 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 OR5V1Q9UGF6 321 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 FUT9Q9Y231 359 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 U3KQK5 164 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 CDK5RAP2Q96SN8 1893 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 CICQ96RK0 1608 aaPredicted RBP1.83□□□□□ -2.12
TRAV28-201ENST00000557548 DENND4CQ5VZ89 1909 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 PLXND1Q9Y4D7 1925 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 ZNF831Q5JPB2 1677 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 FANCMQ8IYD8 2048 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 GOLGB1Q14789 3259 aaKnown RBP1.83□□□□□ -2.12
TRAV28-201ENST00000557548 NRXN2Q9P2S2 1712 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 A0A1B0GUL6 1792 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 LAMB1P07942 1786 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 BCORQ6W2J9 1755 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 KDM3BQ7LBC6 1761 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 ECM29Q5VYK3 1845 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 NCKAP5O14513 1909 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 ZNF638Q14966 1978 aaKnown RBP1.82□□□□□ -2.12
TRAV28-201ENST00000557548 CASP8AP2Q9UKL3 1982 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 TRAV30A0A087WSZ9 112 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 IGHV1-58A0A0C4DH39 117 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 LRCOL1A6NCL2 159 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 ZNF670-ZNF695F2Z2N8 137 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 H3BQ85 93 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 LY6LH3BQJ8 138 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 OR2T1O43869 369 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 SH2D1AO60880 128 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 SNAPC5O75971 98 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 PRM2P04554 102 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 IGLC6P0CF74 106 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 AKAIN1P0CW23 69 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 LINC00694P0DN24 101 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 FABP2P12104 132 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 CSRP1P21291 193 aaKnown RBP1.82□□□□□ -2.12
TRAV28-201ENST00000557548 SRP14P37108 136 aaKnown RBP1.82□□□□□ -2.12
TRAV28-201ENST00000557548 CSN1S1P47710 185 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 EIF2B2P49770 351 aaKnown RBP1.82□□□□□ -2.12
TRAV28-201ENST00000557548 INSL3P51460 131 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 YPEL3P61236 119 aaPredicted RBP1.82□□□□□ -2.12
TRAV28-201ENST00000557548 UBE2BP63146 152 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 CDK6Q00534 326 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 LCE3EQ5T5B0 92 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 AADACL3Q5VUY0 350 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 TMEM244Q5VVB8 128 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 SPINT4Q6UDR6 99 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 LINC00305Q7Z4B0 112 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 HMGN2P46Q86SG4 172 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 OR5C1Q8NGR4 320 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 FNDC9Q8TBE3 224 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 BRK1Q8WUW1 75 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 PP6455Q8WZ26 134 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 ADAT1Q9BUB4 502 aaKnown RBP1.82□□□□□ -2.12
TRAV28-201ENST00000557548 SLC39A9Q9NUM3 307 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 SCN3BQ9NY72 215 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 IL36BQ9NZH7 164 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 CCDC167Q9P0B6 97 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 MARCOQ9UEW3 520 aaPredicted RBP1.82□□□□□ -2.12
TRAV28-201ENST00000557548 TP73-AS1Q9UF72 201 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 BOKQ9UMX3 212 aaPredicted RBP1.82□□□□□ -2.12
TRAV28-201ENST00000557548 KLK5Q9Y337 293 aaPredicted RBP1.82□□□□□ -2.12
TRAV28-201ENST00000557548 TNRC6CQ9HCJ0 1690 aaKnown RBP1.82□□□□□ -2.12
TRAV28-201ENST00000557548 DSPPQ9NZW4 1301 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 PSME4Q14997 1843 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 KDM6AO15550 1401 aaPredicted RBP1.82□□□□□ -2.12
TRAV28-201ENST00000557548 CD163L1Q9NR16 1453 aa1.82□□□□□ -2.12
TRAV28-201ENST00000557548 TICRRQ7Z2Z1 1910 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 ABCC6O95255 1503 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 ANKRD36CQ5JPF3 1778 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 IGKV1D-43A0A0B4J1Z2 117 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 ZNF860A6NHJ4 632 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 TMEM256-PLSCR3K7ERE1 68 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 UBFD1O14562 309 aaKnown RBP1.81□□□□□ -2.12
TRAV28-201ENST00000557548 PGLYRP1O75594 196 aaPredicted RBP1.81□□□□□ -2.12
TRAV28-201ENST00000557548 NAPSAO96009 420 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 IGKV3-11P04433 115 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 ZNF728P0DKX0 622 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 HLA-EP13747 358 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 HIST1H1DP16402 221 aaKnown RBP1.81□□□□□ -2.12
TRAV28-201ENST00000557548 CRYGSP22914 178 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 RPL22P35268 128 aaKnown RBP1.81□□□□□ -2.12
TRAV28-201ENST00000557548 RPL27AP46776 148 aaKnown RBP1.81□□□□□ -2.12
TRAV28-201ENST00000557548 ZNF80P51504 273 aaPredicted RBP1.81□□□□□ -2.12
TRAV28-201ENST00000557548 AQP4P55087 323 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 HIST1H4AP62805 103 aaKnown RBP1.81□□□□□ -2.12
TRAV28-201ENST00000557548 RPL30P62888 115 aaKnown RBP1.81□□□□□ -2.12
TRAV28-201ENST00000557548 EIF5AP63241 154 aaKnown RBP1.81□□□□□ -2.12
TRAV28-201ENST00000557548 HES1Q14469 280 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 ZNF141Q15928 474 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 LGALSLQ3ZCW2 172 aaPredicted RBP1.81□□□□□ -2.12
TRAV28-201ENST00000557548 HSD17B12Q53GQ0 312 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 SPANXN3Q5MJ09 141 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 C10orf91Q5T1B1 145 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 ZNF660Q6AZW8 331 aaPredicted RBP1.81□□□□□ -2.12
TRAV28-201ENST00000557548 AMTNQ6UX39 209 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 TMEM136Q6ZRR5 245 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 RPP25LQ8N5L8 163 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 207 ms