RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 LCN8Q6JVE9 175 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 DPPA3Q6W0C5 159 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 DEFB107AQ8IZN7 70 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 OR52P1PQ8NH57 321 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 VSTM2AQ8TAG5 236 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 RPS4Y2Q8TD47 263 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 DCANP1Q8TF63 244 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 C2orf15Q8WU43 125 aaKnown RBP1.1□□□□□ -2.23
HIF1A-212ENST00000557538 FGF13Q92913 245 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 FAM104AQ969W3 186 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 PGLYRP3Q96LB9 341 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 VAMP8Q9BV40 100 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 SPANXDQ9BXN6 97 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 CALYQ9NYX4 217 aa1.1□□□□□ -2.23
HIF1A-212ENST00000557538 C2orf16Q68DN1 1984 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 LTBP4Q8N2S1 1624 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 IGLV1-36A0A0B4J1U3 117 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 A0A0J9YXY3 114 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 LGALS9O00182 355 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 PDCD6O75340 191 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 KLF7O75840 302 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-212ENST00000557538 DPM2O94777 84 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 NDUFB2O95178 105 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 SRP14P37108 136 aaKnown RBP1.09□□□□□ -2.23
HIF1A-212ENST00000557538 SEC11AP67812 179 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 EIF3IQ13347 325 aaKnown RBP1.09□□□□□ -2.23
HIF1A-212ENST00000557538 CCL15Q16663 113 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 SPATA45Q537H7 98 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 C2orf83Q53S99 150 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 MPV17L2Q567V2 206 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 FAM78AQ5JUQ0 283 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 CFAP126Q5VTH2 177 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 ACP7Q6ZNF0 438 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 TEX29Q8N6K0 151 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 C11orf72Q8NBR9 251 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 OR10J6PQ8NGY7 276 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 OR10AC1Q8NH08 325 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 PSMF1Q92530 271 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 ODF3Q96PU9 254 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 RERGLQ9H628 205 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 CCL28Q9NRJ3 127 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 TP73-AS1Q9UF72 201 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 RPUSD1Q9UJJ7 312 aaKnown RBP1.09□□□□□ -2.23
HIF1A-212ENST00000557538 KLK5Q9Y337 293 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-212ENST00000557538 HEBP2Q9Y5Z4 205 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 TNS1Q9HBL0 1735 aaKnown RBP1.09□□□□□ -2.23
HIF1A-212ENST00000557538 PTPRBP23467 1997 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 RICTORQ6R327 1708 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 IGKV1D-43A0A0B4J1Z2 117 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 PLAC8L1A1L4L8 177 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 RBAKDNA6NC62 111 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 NDUFC2-KCTD14E9PQ53 114 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 M0R378 163 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 CYB5AP00167 134 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 CBLN1P23435 193 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 RPS10P46783 165 aaKnown RBP1.09□□□□□ -2.23
HIF1A-212ENST00000557538 EMP1P54849 157 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 WFDC2Q14508 124 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 BATFQ16520 125 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 NMSQ5H8A3 153 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 C22orf39Q6P5X5 142 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 Q6ZN92 141 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 KTN1-AS1Q86SY8 53 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 TEN1Q86WV5 123 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 OR4X2Q8NGF9 303 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 OR2A5Q96R48 311 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 SLC25A21Q9BQT8 299 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-212ENST00000557538 DPH3P1Q9H4G8 78 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 COMMD9Q9P000 198 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 MARCOQ9UEW3 520 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-212ENST00000557538 TPRKBQ9Y3C4 175 aa1.09□□□□□ -2.23
HIF1A-212ENST00000557538 TRBV20-1A0A075B6N2 111 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 TRAV27A0A087WT01 109 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 XKRYO14609 159 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 ARL2P36404 184 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 ASIPP42127 132 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 DGAT2L6Q6ZPD8 337 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 Q6ZQT7 251 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF493Q6ZR52 646 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 AAED1Q7RTV5 226 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 WDR86Q86TI4 376 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 C20orf203Q8NBC4 194 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 SGMS2Q8NHU3 365 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 BORCS8Q96FH0 119 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 DYNLL2Q96FJ2 89 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 TMEM147Q9BVK8 224 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 IMUPQ9GZP8 106 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 FAM60AQ9NP50 221 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 KCNIP1Q9NZI2 227 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 CELA1Q9UNI1 258 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 COQ4Q9Y3A0 265 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 LINC00588Q9Y4M8 146 aa1.09□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF831Q5JPB2 1677 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 NUP205Q92621 2012 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-212ENST00000557538 TRAV1-1A0A0B4J248 108 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 TLCD2A6NGC4 264 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 RIIAD1A6NNX1 92 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 IBA57-AS1B1ANH7 110 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 UPK2O00526 184 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms