RNA–Protein interactions for RNA: ENST00000557307.1

SYNE2-227, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 526 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-227ENST00000557307 BOLA2-SMG1P6H3BVE0 249 aa7.69□□□□□ -1.18
SYNE2-227ENST00000557307 K7EPK0 472 aa7.69□□□□□ -1.18
SYNE2-227ENST00000557307 AGPAT2O15120 278 aa7.69□□□□□ -1.18
SYNE2-227ENST00000557307 INSP01308 110 aa7.69□□□□□ -1.18
SYNE2-227ENST00000557307 IFNA21P01568 189 aa7.69□□□□□ -1.18
SYNE2-227ENST00000557307 P0DMU3 169 aa7.69□□□□□ -1.18
SYNE2-227ENST00000557307 FAM231AP0DMU4 169 aa7.69□□□□□ -1.18
SYNE2-227ENST00000557307 FAM231CP0DMU5 169 aa7.69□□□□□ -1.18
SYNE2-227ENST00000557307 Q6ZR54 194 aa7.69□□□□□ -1.18
SYNE2-227ENST00000557307 OR8A1Q8NGG7 326 aa7.69□□□□□ -1.18
SYNE2-227ENST00000557307 GPR82Q96P67 336 aa7.69□□□□□ -1.18
SYNE2-227ENST00000557307 TMEM208Q9BTX3 173 aa7.69□□□□□ -1.18
SYNE2-227ENST00000557307 NPVFQ9HCQ7 196 aa7.69□□□□□ -1.18
SYNE2-227ENST00000557307 LSM5Q9Y4Y9 91 aaKnown RBP7.69□□□□□ -1.18
SYNE2-227ENST00000557307 LRP1BQ9NZR2 4599 aa7.69□□□□□ -1.18
SYNE2-227ENST00000557307 TRAV5A0A0B4J249 113 aa7.68□□□□□ -1.18
SYNE2-227ENST00000557307 FAM24AA6NFZ4 105 aa7.68□□□□□ -1.18
SYNE2-227ENST00000557307 LYRM1O43325 122 aa7.68□□□□□ -1.18
SYNE2-227ENST00000557307 TSC22D2O75157 780 aa7.68□□□□□ -1.18
SYNE2-227ENST00000557307 RPL7P18124 248 aaKnown RBP7.68□□□□□ -1.18
SYNE2-227ENST00000557307 DAD1P61803 113 aa7.68□□□□□ -1.18
SYNE2-227ENST00000557307 OPCMLQ14982 345 aa7.68□□□□□ -1.18
SYNE2-227ENST00000557307 OXA1LQ15070 435 aa7.68□□□□□ -1.18
SYNE2-227ENST00000557307 PSG3Q16557 428 aa7.68□□□□□ -1.18
SYNE2-227ENST00000557307 TEPPQ6URK8 271 aa7.68□□□□□ -1.18
SYNE2-227ENST00000557307 LINC00305Q7Z4B0 112 aa7.68□□□□□ -1.18
SYNE2-227ENST00000557307 OR10P1Q8NGE3 313 aa7.68□□□□□ -1.18
SYNE2-227ENST00000557307 MGAT4CQ9UBM8 478 aa7.68□□□□□ -1.18
SYNE2-227ENST00000557307 IGSF23A1L1A6 192 aa7.67□□□□□ -1.18
SYNE2-227ENST00000557307 PRSS29PA6NIE9 313 aa7.67□□□□□ -1.18
SYNE2-227ENST00000557307 FNDC10F2Z333 226 aa7.67□□□□□ -1.18
SYNE2-227ENST00000557307 H3BQ15 152 aa7.67□□□□□ -1.18
SYNE2-227ENST00000557307 CST7O76096 145 aa7.67□□□□□ -1.18
SYNE2-227ENST00000557307 DUSP14O95147 198 aaKnown RBP7.67□□□□□ -1.18
SYNE2-227ENST00000557307 TCRBP04435 133 aa7.67□□□□□ -1.18
SYNE2-227ENST00000557307 DEFB130BP0DP73 79 aa7.67□□□□□ -1.18
SYNE2-227ENST00000557307 DEFB130AP0DP74 79 aa7.67□□□□□ -1.18
SYNE2-227ENST00000557307 SELENOTP62341 195 aa7.67□□□□□ -1.18
SYNE2-227ENST00000557307 RHOBP62745 196 aa7.67□□□□□ -1.18
SYNE2-227ENST00000557307 SAMD13Q5VXD3 122 aa7.67□□□□□ -1.18
SYNE2-227ENST00000557307 MIC13Q5XKP0 118 aa7.67□□□□□ -1.18
SYNE2-227ENST00000557307 UBE2DNLQ8IWF7 75 aa7.67□□□□□ -1.18
SYNE2-227ENST00000557307 RPUSD4Q96CM3 377 aaKnown RBP7.67□□□□□ -1.18
SYNE2-227ENST00000557307 ZNF331Q9NQX6 463 aaPredicted RBP7.67□□□□□ -1.18
SYNE2-227ENST00000557307 NUDT15Q9NV35 164 aa7.67□□□□□ -1.18
SYNE2-227ENST00000557307 HSPG2P98160 4391 aa7.67□□□□□ -1.18
SYNE2-227ENST00000557307 APOBP04114 4563 aaKnown RBP7.66□□□□□ -1.18
SYNE2-227ENST00000557307 CENPXA8MT69 81 aa7.66□□□□□ -1.18
SYNE2-227ENST00000557307 FAM25EA8MYX2 175 aa7.66□□□□□ -1.18
SYNE2-227ENST00000557307 IGLC2P0DOY2 106 aa7.66□□□□□ -1.18
SYNE2-227ENST00000557307 TAS2R30P59541 319 aa7.66□□□□□ -1.18
SYNE2-227ENST00000557307 ZNF546Q86UE3 836 aa7.66□□□□□ -1.18
SYNE2-227ENST00000557307 ZNF431Q8TF32 576 aaPredicted RBP7.66□□□□□ -1.18
SYNE2-227ENST00000557307 UBE2L5PA0A1B0GUS4 154 aa7.65□□□□□ -1.18
SYNE2-227ENST00000557307 TEX48A0A1B0GUV7 120 aa7.65□□□□□ -1.18
SYNE2-227ENST00000557307 J3KRW8 73 aa7.65□□□□□ -1.18
SYNE2-227ENST00000557307 GOSR2O14653 212 aa7.65□□□□□ -1.18
SYNE2-227ENST00000557307 COX7A2P2O60397 106 aa7.65□□□□□ -1.18
SYNE2-227ENST00000557307 HTN1P15515 57 aa7.65□□□□□ -1.18
SYNE2-227ENST00000557307 IL15RAQ13261 267 aa7.65□□□□□ -1.18
SYNE2-227ENST00000557307 RAB32Q13637 225 aa7.65□□□□□ -1.18
SYNE2-227ENST00000557307 LGALS9BQ3B8N2 356 aa7.65□□□□□ -1.18
SYNE2-227ENST00000557307 GFI1BQ5VTD9 330 aa7.65□□□□□ -1.18
SYNE2-227ENST00000557307 LINC00336Q6ZUF6 198 aa7.65□□□□□ -1.18
SYNE2-227ENST00000557307 NRARPQ7Z6K4 114 aa7.65□□□□□ -1.18
SYNE2-227ENST00000557307 ZNF575Q86XF7 245 aa7.65□□□□□ -1.18
SYNE2-227ENST00000557307 SAT2Q96F10 170 aaPredicted RBP7.65□□□□□ -1.18
SYNE2-227ENST00000557307 LINC01587Q99440 93 aa7.65□□□□□ -1.18
SYNE2-227ENST00000557307 LYRM9A8MSI8 78 aa7.64□□□□□ -1.19
SYNE2-227ENST00000557307 L7N2F9 121 aa7.64□□□□□ -1.19
SYNE2-227ENST00000557307 TSPOP30536 169 aa7.64□□□□□ -1.19
SYNE2-227ENST00000557307 CAMLGP49069 296 aa7.64□□□□□ -1.19
SYNE2-227ENST00000557307 BCAP31P51572 246 aa7.64□□□□□ -1.19
SYNE2-227ENST00000557307 CAV2P51636 162 aa7.64□□□□□ -1.19
SYNE2-227ENST00000557307 S100A10P60903 97 aa7.64□□□□□ -1.19
SYNE2-227ENST00000557307 VAMP2P63027 116 aa7.64□□□□□ -1.19
SYNE2-227ENST00000557307 GCSAMLQ5JQS6 135 aa7.64□□□□□ -1.19
SYNE2-227ENST00000557307 LCN15Q6UWW0 184 aa7.64□□□□□ -1.19
SYNE2-227ENST00000557307 C12orf45Q8N5I9 185 aaPredicted RBP7.64□□□□□ -1.19
SYNE2-227ENST00000557307 LRRC20Q8TCA0 184 aa7.64□□□□□ -1.19
SYNE2-227ENST00000557307 RNASE8Q8TDE3 154 aaKnown RBP7.64□□□□□ -1.19
SYNE2-227ENST00000557307 FAM210BQ96KR6 192 aa7.64□□□□□ -1.19
SYNE2-227ENST00000557307 ZNF586Q9NXT0 402 aa7.64□□□□□ -1.19
SYNE2-227ENST00000557307 WDR83OSQ9Y284 106 aa7.64□□□□□ -1.19
SYNE2-227ENST00000557307 C5orf51A6NDU8 294 aa7.63□□□□□ -1.19
SYNE2-227ENST00000557307 F5H768 121 aa7.63□□□□□ -1.19
SYNE2-227ENST00000557307 M0R3E3 92 aa7.63□□□□□ -1.19
SYNE2-227ENST00000557307 SIX6O95475 246 aa7.63□□□□□ -1.19
SYNE2-227ENST00000557307 CT45A10P0DMU9 189 aa7.63□□□□□ -1.19
SYNE2-227ENST00000557307 CXCL2P19875 107 aa7.63□□□□□ -1.19
SYNE2-227ENST00000557307 CDKN1BP46527 198 aa7.63□□□□□ -1.19
SYNE2-227ENST00000557307 VWC2Q2TAL6 325 aa7.63□□□□□ -1.19
SYNE2-227ENST00000557307 C10orf113Q5VZT2 155 aa7.63□□□□□ -1.19
SYNE2-227ENST00000557307 RNF141Q8WVD5 230 aa7.63□□□□□ -1.19
SYNE2-227ENST00000557307 C2orf50Q96LR7 162 aa7.63□□□□□ -1.19
SYNE2-227ENST00000557307 GGACTQ9BVM4 153 aa7.63□□□□□ -1.19
SYNE2-227ENST00000557307 NOP10Q9NPE3 64 aaKnown RBP7.63□□□□□ -1.19
SYNE2-227ENST00000557307 NUDT3O95989 172 aa7.62□□□□□ -1.19
SYNE2-227ENST00000557307 H2AFB2P0C5Z0 115 aa7.62□□□□□ -1.19
SYNE2-227ENST00000557307 PYYP10082 97 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms