RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 MSRB1Q9NZV6 116 aa8.44□□□□□ -1.06
PSEN1-221ENST00000557293 C14orf166Q9Y224 244 aaKnown RBP8.44□□□□□ -1.06
PSEN1-221ENST00000557293 A0A0B4J2A0 478 aa8.43□□□□□ -1.06
PSEN1-221ENST00000557293 SNURFLB1AK76 121 aa8.43□□□□□ -1.06
PSEN1-221ENST00000557293 PRAC2D3DTV9 90 aa8.43□□□□□ -1.06
PSEN1-221ENST00000557293 SURF2Q15527 256 aaPredicted RBP8.43□□□□□ -1.06
PSEN1-221ENST00000557293 ZBTB8BQ8NAP8 495 aaPredicted RBP8.43□□□□□ -1.06
PSEN1-221ENST00000557293 SYT8Q8NBV8 401 aa8.43□□□□□ -1.06
PSEN1-221ENST00000557293 OR1S1Q8NH92 325 aa8.43□□□□□ -1.06
PSEN1-221ENST00000557293 TMEM147Q9BVK8 224 aa8.43□□□□□ -1.06
PSEN1-221ENST00000557293 SHPKQ9UHJ6 478 aa8.43□□□□□ -1.06
PSEN1-221ENST00000557293 IGLV5-52A0A0A0MRZ9 124 aa8.42□□□□□ -1.06
PSEN1-221ENST00000557293 IAPPP10997 89 aa8.42□□□□□ -1.06
PSEN1-221ENST00000557293 TAS2R19P59542 299 aa8.42□□□□□ -1.06
PSEN1-221ENST00000557293 KRTAP10-4P60372 401 aaPredicted RBP8.42□□□□□ -1.06
PSEN1-221ENST00000557293 C11orf72Q8NBR9 251 aa8.42□□□□□ -1.06
PSEN1-221ENST00000557293 DEFB104AQ8WTQ1 72 aa8.42□□□□□ -1.06
PSEN1-221ENST00000557293 LINC00467Q9BRT7 94 aa8.42□□□□□ -1.06
PSEN1-221ENST00000557293 LINC00854A0A1B0GVQ3 168 aa8.41□□□□□ -1.06
PSEN1-221ENST00000557293 PAX4O43316 350 aa8.41□□□□□ -1.06
PSEN1-221ENST00000557293 PLA2G1BP04054 148 aaKnown RBP8.41□□□□□ -1.06
PSEN1-221ENST00000557293 RPL7P18124 248 aaKnown RBP8.41□□□□□ -1.06
PSEN1-221ENST00000557293 PLP1P60201 277 aa8.41□□□□□ -1.06
PSEN1-221ENST00000557293 NCS1P62166 190 aa8.41□□□□□ -1.06
PSEN1-221ENST00000557293 RAB11AP62491 216 aa8.41□□□□□ -1.06
PSEN1-221ENST00000557293 PATE2Q6UY27 113 aa8.41□□□□□ -1.06
PSEN1-221ENST00000557293 WFDC10BQ8IUB3 73 aa8.41□□□□□ -1.06
PSEN1-221ENST00000557293 ZNF431Q8TF32 576 aaPredicted RBP8.41□□□□□ -1.06
PSEN1-221ENST00000557293 ZNF331Q9NQX6 463 aaPredicted RBP8.41□□□□□ -1.06
PSEN1-221ENST00000557293 GSN-AS1Q9NRJ2 163 aa8.41□□□□□ -1.06
PSEN1-221ENST00000557293 PLA2G2DQ9UNK4 145 aa8.41□□□□□ -1.06
PSEN1-221ENST00000557293 ICOSQ9Y6W8 199 aa8.41□□□□□ -1.06
PSEN1-221ENST00000557293 FAT3Q8TDW7 4589 aa8.4□□□□□ -1.06
PSEN1-221ENST00000557293 TRAV12-3A0A0B4J271 114 aa8.4□□□□□ -1.06
PSEN1-221ENST00000557293 FAM25AB3EWG3 89 aa8.4□□□□□ -1.06
PSEN1-221ENST00000557293 FAM25CB3EWG5 89 aa8.4□□□□□ -1.06
PSEN1-221ENST00000557293 FAM25GB3EWG6 89 aa8.4□□□□□ -1.06
PSEN1-221ENST00000557293 NPIPB6E9PJ23 425 aa8.4□□□□□ -1.06
PSEN1-221ENST00000557293 CT45A10P0DMU9 189 aa8.4□□□□□ -1.06
PSEN1-221ENST00000557293 ACOT7LQ6ZUV0 252 aa8.4□□□□□ -1.06
PSEN1-221ENST00000557293 NTN5Q8WTR8 489 aaPredicted RBP8.4□□□□□ -1.06
PSEN1-221ENST00000557293 FUT9Q9Y231 359 aa8.4□□□□□ -1.06
PSEN1-221ENST00000557293 HIGD1AQ9Y241 93 aa8.4□□□□□ -1.06
PSEN1-221ENST00000557293 KCNIP3Q9Y2W7 256 aa8.4□□□□□ -1.06
PSEN1-221ENST00000557293 LY96Q9Y6Y9 160 aa8.4□□□□□ -1.06
PSEN1-221ENST00000557293 TRGV2A0A075B6R0 118 aa8.39□□□□□ -1.07
PSEN1-221ENST00000557293 TRAV9-2A0A087WT02 112 aa8.39□□□□□ -1.07
PSEN1-221ENST00000557293 PMS2P5A8MQ11 134 aa8.39□□□□□ -1.07
PSEN1-221ENST00000557293 PRAF2O60831 178 aa8.39□□□□□ -1.07
PSEN1-221ENST00000557293 C1QBP02746 253 aa8.39□□□□□ -1.07
PSEN1-221ENST00000557293 SNRPCP09234 159 aaKnown RBP8.39□□□□□ -1.07
PSEN1-221ENST00000557293 CRYBA4P53673 196 aa8.39□□□□□ -1.07
PSEN1-221ENST00000557293 VBP1P61758 197 aa8.39□□□□□ -1.07
PSEN1-221ENST00000557293 Q6ZSA8 131 aa8.39□□□□□ -1.07
PSEN1-221ENST00000557293 CYP2G1PQ6ZSU1 146 aa8.39□□□□□ -1.07
PSEN1-221ENST00000557293 LINC00528Q8N1L1 170 aa8.39□□□□□ -1.07
PSEN1-221ENST00000557293 PYGO2Q9BRQ0 406 aa8.39□□□□□ -1.07
PSEN1-221ENST00000557293 EXTL2Q9UBQ6 330 aa8.39□□□□□ -1.07
PSEN1-221ENST00000557293 PAIP2BQ9ULR5 123 aaKnown RBP8.39□□□□□ -1.07
PSEN1-221ENST00000557293 KLF12Q9Y4X4 402 aa8.39□□□□□ -1.07
PSEN1-221ENST00000557293 DISC1C4P0D8 188 aa8.38□□□□□ -1.07
PSEN1-221ENST00000557293 J3KRW8 73 aa8.38□□□□□ -1.07
PSEN1-221ENST00000557293 K7EP13 123 aa8.38□□□□□ -1.07
PSEN1-221ENST00000557293 SPINK4O60575 86 aa8.38□□□□□ -1.07
PSEN1-221ENST00000557293 HYPMO75409 117 aa8.38□□□□□ -1.07
PSEN1-221ENST00000557293 AKR1C4P17516 323 aa8.38□□□□□ -1.07
PSEN1-221ENST00000557293 RAP2BP61225 183 aa8.38□□□□□ -1.07
PSEN1-221ENST00000557293 FHL2Q14192 279 aa8.38□□□□□ -1.07
PSEN1-221ENST00000557293 TEPPQ6URK8 271 aa8.38□□□□□ -1.07
PSEN1-221ENST00000557293 CCDC190Q86UF4 302 aa8.38□□□□□ -1.07
PSEN1-221ENST00000557293 OR51S1Q8NGJ8 323 aa8.38□□□□□ -1.07
PSEN1-221ENST00000557293 LRRC20Q8TCA0 184 aa8.38□□□□□ -1.07
PSEN1-221ENST00000557293 MIXL1Q9H2W2 232 aa8.38□□□□□ -1.07
PSEN1-221ENST00000557293 PRO0255Q9UI72 69 aa8.38□□□□□ -1.07
PSEN1-221ENST00000557293 TRGV1A0A0A0MS02 117 aa8.37□□□□□ -1.07
PSEN1-221ENST00000557293 SLC17A3O00476 420 aa8.37□□□□□ -1.07
PSEN1-221ENST00000557293 OXTP01178 125 aa8.37□□□□□ -1.07
PSEN1-221ENST00000557293 IL5P05113 134 aa8.37□□□□□ -1.07
PSEN1-221ENST00000557293 S100A7P31151 101 aa8.37□□□□□ -1.07
PSEN1-221ENST00000557293 SSBP1Q04837 148 aaKnown RBP8.37□□□□□ -1.07
PSEN1-221ENST00000557293 MRPL23Q16540 153 aaKnown RBP8.37□□□□□ -1.07
PSEN1-221ENST00000557293 C4orf46Q504U0 113 aa8.37□□□□□ -1.07
PSEN1-221ENST00000557293 NEGR1Q7Z3B1 354 aa8.37□□□□□ -1.07
PSEN1-221ENST00000557293 WRBO00258 174 aa8.36□□□□□ -1.07
PSEN1-221ENST00000557293 IGHV3-53P01767 116 aa8.36□□□□□ -1.07
PSEN1-221ENST00000557293 OR5G3P0C626 314 aa8.36□□□□□ -1.07
PSEN1-221ENST00000557293 CXCL2P19875 107 aa8.36□□□□□ -1.07
PSEN1-221ENST00000557293 ANXA2RQ3ZCQ2 193 aa8.36□□□□□ -1.07
PSEN1-221ENST00000557293 MZT2AQ6P582 158 aa8.36□□□□□ -1.07
PSEN1-221ENST00000557293 Q8N814 137 aa8.36□□□□□ -1.07
PSEN1-221ENST00000557293 SAT2Q96F10 170 aaPredicted RBP8.36□□□□□ -1.07
PSEN1-221ENST00000557293 ST6GAL2Q96JF0 529 aa8.36□□□□□ -1.07
PSEN1-221ENST00000557293 C8orf49Q96NF6 230 aa8.36□□□□□ -1.07
PSEN1-221ENST00000557293 FUNDC2Q9BWH2 189 aa8.36□□□□□ -1.07
PSEN1-221ENST00000557293 HHLA3Q9XRX5 114 aa8.36□□□□□ -1.07
PSEN1-221ENST00000557293 H3BTX0 84 aa8.35□□□□□ -1.07
PSEN1-221ENST00000557293 SYNGR2O43760 224 aa8.35□□□□□ -1.07
PSEN1-221ENST00000557293 LINC00869P0C866 280 aa8.35□□□□□ -1.07
PSEN1-221ENST00000557293 AKAIN1P0CW23 69 aa8.35□□□□□ -1.07
PSEN1-221ENST00000557293 EVI2AP22794 236 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms