RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 IQCF2Q8IXL9 164 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 GBGT1Q8N5D6 347 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 ZNF680Q8NEM1 530 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 SFT2D1Q8WV19 159 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 MBD3L1Q8WWY6 194 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 MS4A6AQ9H2W1 248 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 HRH4Q9H3N8 390 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 TMEM167BQ9NRX6 74 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 CMYA5Q8N3K9 4069 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 IZUMO1RA6ND01 250 aa7.31□□□□□ -1.24
TMEM260-213ENST00000556929 A6NJY4 79 aa7.31□□□□□ -1.24
TMEM260-213ENST00000556929 EIF3GO75821 320 aaKnown RBP eCLIP7.31□□□□□ -1.24
TMEM260-213ENST00000556929 OR10J4P0C629 311 aa7.31□□□□□ -1.24
TMEM260-213ENST00000556929 ARL14EPLP0DKL9 152 aa7.31□□□□□ -1.24
TMEM260-213ENST00000556929 IGLC2P0DOY2 106 aa7.31□□□□□ -1.24
TMEM260-213ENST00000556929 TFPI2P48307 235 aa7.31□□□□□ -1.24
TMEM260-213ENST00000556929 FGF8P55075 233 aaPredicted RBP7.31□□□□□ -1.24
TMEM260-213ENST00000556929 CMC4P56277 68 aaPredicted RBP7.31□□□□□ -1.24
TMEM260-213ENST00000556929 PSG9Q00887 426 aa7.31□□□□□ -1.24
TMEM260-213ENST00000556929 PDE6HQ13956 83 aa7.31□□□□□ -1.24
TMEM260-213ENST00000556929 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.31□□□□□ -1.24
TMEM260-213ENST00000556929 ZNF767PQ75MW2 155 aa7.31□□□□□ -1.24
TMEM260-213ENST00000556929 FXYD5Q96DB9 178 aa7.31□□□□□ -1.24
TMEM260-213ENST00000556929 SAT2Q96F10 170 aaPredicted RBP7.31□□□□□ -1.24
TMEM260-213ENST00000556929 C16orf92Q96LL3 132 aa7.31□□□□□ -1.24
TMEM260-213ENST00000556929 SLC50A1Q9BRV3 221 aa7.31□□□□□ -1.24
TMEM260-213ENST00000556929 CLEC5AQ9NY25 188 aa7.31□□□□□ -1.24
TMEM260-213ENST00000556929 TRBV19A0A075B6N1 114 aa7.3□□□□□ -1.24
TMEM260-213ENST00000556929 H3BQ15 152 aa7.3□□□□□ -1.24
TMEM260-213ENST00000556929 K7EQG2 157 aa7.3□□□□□ -1.24
TMEM260-213ENST00000556929 ZNF253O75346 499 aa7.3□□□□□ -1.24
TMEM260-213ENST00000556929 SNRPCP09234 159 aaKnown RBP7.3□□□□□ -1.24
TMEM260-213ENST00000556929 GCHFRP30047 84 aa7.3□□□□□ -1.24
TMEM260-213ENST00000556929 PSMB3P49720 205 aa7.3□□□□□ -1.24
TMEM260-213ENST00000556929 PPT1P50897 306 aa7.3□□□□□ -1.24
TMEM260-213ENST00000556929 SAMD5Q5TGI4 173 aa7.3□□□□□ -1.24
TMEM260-213ENST00000556929 DCANP1Q8TF63 244 aa7.3□□□□□ -1.24
TMEM260-213ENST00000556929 BLNKQ8WV28 456 aa7.3□□□□□ -1.24
TMEM260-213ENST00000556929 ZNF503Q96F45 646 aa7.3□□□□□ -1.24
TMEM260-213ENST00000556929 AAMDCQ9H7C9 122 aa7.3□□□□□ -1.24
TMEM260-213ENST00000556929 ZNF586Q9NXT0 402 aa7.3□□□□□ -1.24
TMEM260-213ENST00000556929 ZNF256Q9Y2P7 627 aaPredicted RBP7.3□□□□□ -1.24
TMEM260-213ENST00000556929 TRRAPQ9Y4A5 3859 aa7.29□□□□□ -1.24
TMEM260-213ENST00000556929 TRAV1-1A0A0B4J248 108 aa7.29□□□□□ -1.24
TMEM260-213ENST00000556929 G3V4G9 280 aa7.29□□□□□ -1.24
TMEM260-213ENST00000556929 H3BTX0 84 aa7.29□□□□□ -1.24
TMEM260-213ENST00000556929 ISLRO14498 428 aa7.29□□□□□ -1.24
TMEM260-213ENST00000556929 RAB14P61106 215 aa7.29□□□□□ -1.24
TMEM260-213ENST00000556929 SNRPD3P62318 126 aaKnown RBP7.29□□□□□ -1.24
TMEM260-213ENST00000556929 EGFEM1PQ0D2K5 195 aa7.29□□□□□ -1.24
TMEM260-213ENST00000556929 BEAN1Q3B7T3 259 aa7.29□□□□□ -1.24
TMEM260-213ENST00000556929 GTSCR1Q86UQ5 136 aa7.29□□□□□ -1.24
TMEM260-213ENST00000556929 LYPD1Q8N2G4 141 aa7.29□□□□□ -1.24
TMEM260-213ENST00000556929 SUN5Q8TC36 379 aa7.29□□□□□ -1.24
TMEM260-213ENST00000556929 C17orf77Q96MU5 243 aa7.29□□□□□ -1.24
TMEM260-213ENST00000556929 TMPRSS5Q9H3S3 457 aa7.29□□□□□ -1.24
TMEM260-213ENST00000556929 ZNF331Q9NQX6 463 aaPredicted RBP7.29□□□□□ -1.24
TMEM260-213ENST00000556929 A0A1B0GV50 99 aa7.28□□□□□ -1.24
TMEM260-213ENST00000556929 SOCS3O14543 225 aa7.28□□□□□ -1.24
TMEM260-213ENST00000556929 IFNA1P01562 189 aa7.28□□□□□ -1.24
TMEM260-213ENST00000556929 RANP62826 216 aaKnown RBP7.28□□□□□ -1.24
TMEM260-213ENST00000556929 LINC00052Q96N35 136 aa7.28□□□□□ -1.24
TMEM260-213ENST00000556929 PRELID1Q9Y255 219 aa7.28□□□□□ -1.24
TMEM260-213ENST00000556929 VWFP04275 2813 aa7.27□□□□□ -1.25
TMEM260-213ENST00000556929 A0A1W2PRE2 83 aa7.27□□□□□ -1.25
TMEM260-213ENST00000556929 OR11H12B2RN74 326 aa7.27□□□□□ -1.25
TMEM260-213ENST00000556929 SLC17A3O00476 420 aa7.27□□□□□ -1.25
TMEM260-213ENST00000556929 NDUFB4O95168 129 aa7.27□□□□□ -1.25
TMEM260-213ENST00000556929 ZNF688P0C7X2 276 aa7.27□□□□□ -1.25
TMEM260-213ENST00000556929 CD81P60033 236 aa7.27□□□□□ -1.25
TMEM260-213ENST00000556929 IFITM2Q01629 132 aa7.27□□□□□ -1.25
TMEM260-213ENST00000556929 PSG3Q16557 428 aa7.27□□□□□ -1.25
TMEM260-213ENST00000556929 FAM110AQ9BQ89 295 aa7.27□□□□□ -1.25
TMEM260-213ENST00000556929 NKX6-2Q9C056 277 aaPredicted RBP7.27□□□□□ -1.25
TMEM260-213ENST00000556929 Q9H3A6 140 aa7.27□□□□□ -1.25
TMEM260-213ENST00000556929 MAP6D1Q9H9H5 199 aa7.27□□□□□ -1.25
TMEM260-213ENST00000556929 MANBALQ9NQG1 85 aa7.27□□□□□ -1.25
TMEM260-213ENST00000556929 OTORQ9NRC9 128 aa7.27□□□□□ -1.25
TMEM260-213ENST00000556929 ARL2-SNX15V9GYD0 113 aa7.27□□□□□ -1.25
TMEM260-213ENST00000556929 TRAV8-2A0A0B4J237 113 aa7.26□□□□□ -1.25
TMEM260-213ENST00000556929 PGPA6NDG6 321 aa7.26□□□□□ -1.25
TMEM260-213ENST00000556929 CSN1S1P47710 185 aa7.26□□□□□ -1.25
TMEM260-213ENST00000556929 DEFB131AP59861 70 aa7.26□□□□□ -1.25
TMEM260-213ENST00000556929 UBE2G2P60604 165 aa7.26□□□□□ -1.25
TMEM260-213ENST00000556929 ICAM4Q14773 271 aa7.26□□□□□ -1.25
TMEM260-213ENST00000556929 PSMG4Q5JS54 123 aa7.26□□□□□ -1.25
TMEM260-213ENST00000556929 EXOC3-AS1Q8N2X6 119 aa7.26□□□□□ -1.25
TMEM260-213ENST00000556929 FAM24BQ8N5W8 94 aa7.26□□□□□ -1.25
TMEM260-213ENST00000556929 ZNF738Q8NE65 137 aa7.26□□□□□ -1.25
TMEM260-213ENST00000556929 LYPD6BQ8NI32 183 aa7.26□□□□□ -1.25
TMEM260-213ENST00000556929 CMTM2Q8TAZ6 248 aa7.26□□□□□ -1.25
TMEM260-213ENST00000556929 RXFP4Q8TDU9 374 aa7.26□□□□□ -1.25
TMEM260-213ENST00000556929 MRPL53Q96EL3 112 aaKnown RBP7.26□□□□□ -1.25
TMEM260-213ENST00000556929 FAM74A7A6NL05 159 aa7.25□□□□□ -1.25
TMEM260-213ENST00000556929 PAGE4O60829 102 aa7.25□□□□□ -1.25
TMEM260-213ENST00000556929 NMBP08949 121 aa7.25□□□□□ -1.25
TMEM260-213ENST00000556929 CD7P09564 240 aa7.25□□□□□ -1.25
TMEM260-213ENST00000556929 HLA-DMBP28068 263 aa7.25□□□□□ -1.25
TMEM260-213ENST00000556929 TAGLN2P37802 199 aaKnown RBP7.25□□□□□ -1.25
TMEM260-213ENST00000556929 KRTAP10-11P60412 298 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms