RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 PSG3Q16557 428 aa10.3□□□□□ -0.76
CHD8-211ENST00000556833 TMEM144Q7Z5S9 345 aa10.3□□□□□ -0.76
CHD8-211ENST00000556833 LRTM2Q8N967 370 aa10.3□□□□□ -0.76
CHD8-211ENST00000556833 RPUSD4Q96CM3 377 aaKnown RBP10.3□□□□□ -0.76
CHD8-211ENST00000556833 C16orf74Q96GX8 76 aa10.3□□□□□ -0.76
CHD8-211ENST00000556833 ARL6Q9H0F7 186 aa10.3□□□□□ -0.76
CHD8-211ENST00000556833 APOBP04114 4563 aaKnown RBP10.29□□□□□ -0.76
CHD8-211ENST00000556833 TRAV26-1A0A087WT03 109 aa10.29□□□□□ -0.76
CHD8-211ENST00000556833 NOL3O60936 208 aaKnown RBP10.29□□□□□ -0.76
CHD8-211ENST00000556833 CDK2AP2O75956 126 aa10.29□□□□□ -0.76
CHD8-211ENST00000556833 SCGB1D2O95969 90 aa10.29□□□□□ -0.76
CHD8-211ENST00000556833 METTL15P1P0C7V9 234 aa10.29□□□□□ -0.76
CHD8-211ENST00000556833 ANXA7P20073 488 aaKnown RBP10.29□□□□□ -0.76
CHD8-211ENST00000556833 TAS2R60P59551 318 aa10.29□□□□□ -0.76
CHD8-211ENST00000556833 B2MP61769 119 aa10.29□□□□□ -0.76
CHD8-211ENST00000556833 CCDC190Q86UF4 302 aa10.29□□□□□ -0.76
CHD8-211ENST00000556833 TIMM8BQ9Y5J9 83 aaPredicted RBP10.29□□□□□ -0.76
CHD8-211ENST00000556833 GAGE12BA1L429 117 aa10.28□□□□□ -0.76
CHD8-211ENST00000556833 PMS2P5A8MQ11 134 aa10.28□□□□□ -0.76
CHD8-211ENST00000556833 GAGE7O76087 117 aa10.28□□□□□ -0.76
CHD8-211ENST00000556833 GAGE12FP0CL80 117 aa10.28□□□□□ -0.76
CHD8-211ENST00000556833 GAGE12GP0CL81 117 aa10.28□□□□□ -0.76
CHD8-211ENST00000556833 GAGE12IP0CL82 117 aa10.28□□□□□ -0.76
CHD8-211ENST00000556833 S100A7P31151 101 aa10.28□□□□□ -0.76
CHD8-211ENST00000556833 AP3S2P59780 193 aa10.28□□□□□ -0.76
CHD8-211ENST00000556833 PATE2Q6UY27 113 aa10.28□□□□□ -0.76
CHD8-211ENST00000556833 TMEM256Q8N2U0 113 aa10.28□□□□□ -0.76
CHD8-211ENST00000556833 GNPNAT1Q96EK6 184 aaPredicted RBP10.28□□□□□ -0.76
CHD8-211ENST00000556833 Q9H8V8 135 aa10.28□□□□□ -0.76
CHD8-211ENST00000556833 PIGBOS1A0A0B4J2F0 54 aa10.27□□□□□ -0.77
CHD8-211ENST00000556833 PRAC2D3DTV9 90 aa10.27□□□□□ -0.77
CHD8-211ENST00000556833 SLC17A3O00476 420 aa10.27□□□□□ -0.77
CHD8-211ENST00000556833 FUSP35637 526 aaKnown RBP eCLIP10.27□□□□□ -0.77
CHD8-211ENST00000556833 CDKN1BP46527 198 aa10.27□□□□□ -0.77
CHD8-211ENST00000556833 TMBIM6P55061 237 aa10.27□□□□□ -0.77
CHD8-211ENST00000556833 KRTAP10-2P60368 255 aa10.27□□□□□ -0.77
CHD8-211ENST00000556833 RNASE8Q8TDE3 154 aaKnown RBP10.27□□□□□ -0.77
CHD8-211ENST00000556833 ARV1Q9H2C2 271 aa10.27□□□□□ -0.77
CHD8-211ENST00000556833 SCRT2Q9NQ03 307 aa10.27□□□□□ -0.77
CHD8-211ENST00000556833 FLVCR2Q9UPI3 526 aa10.27□□□□□ -0.77
CHD8-211ENST00000556833 V9GYH0 126 aa10.27□□□□□ -0.77
CHD8-211ENST00000556833 A0A087X0K7 114 aa10.26□□□□□ -0.77
CHD8-211ENST00000556833 LINC00854A0A1B0GVQ3 168 aa10.26□□□□□ -0.77
CHD8-211ENST00000556833 ZNF701M0R085 212 aaPredicted RBP10.26□□□□□ -0.77
CHD8-211ENST00000556833 HOXA5P20719 270 aa10.26□□□□□ -0.77
CHD8-211ENST00000556833 GFI1BQ5VTD9 330 aa10.26□□□□□ -0.77
CHD8-211ENST00000556833 TMEM263Q8WUH6 116 aaKnown RBP10.26□□□□□ -0.77
CHD8-211ENST00000556833 SLC25A21Q9BQT8 299 aaPredicted RBP10.26□□□□□ -0.77
CHD8-211ENST00000556833 C9orf170A2RU37 121 aa10.25□□□□□ -0.77
CHD8-211ENST00000556833 MORN5Q5VZ52 161 aa10.25□□□□□ -0.77
CHD8-211ENST00000556833 ZNF586Q9NXT0 402 aa10.25□□□□□ -0.77
CHD8-211ENST00000556833 MGAT4CQ9UBM8 478 aa10.25□□□□□ -0.77
CHD8-211ENST00000556833 H7BYZ3 331 aa10.24□□□□□ -0.77
CHD8-211ENST00000556833 MRPS12O15235 138 aaKnown RBP10.24□□□□□ -0.77
CHD8-211ENST00000556833 M6PRP20645 277 aa10.24□□□□□ -0.77
CHD8-211ENST00000556833 PLP1P60201 277 aa10.24□□□□□ -0.77
CHD8-211ENST00000556833 UBE2MP61081 183 aaKnown RBP10.24□□□□□ -0.77
CHD8-211ENST00000556833 ID3Q02535 119 aa10.24□□□□□ -0.77
CHD8-211ENST00000556833 ESRGQ1W209 222 aa10.24□□□□□ -0.77
CHD8-211ENST00000556833 LINC00305Q7Z4B0 112 aa10.24□□□□□ -0.77
CHD8-211ENST00000556833 Q8N1X5 172 aa10.24□□□□□ -0.77
CHD8-211ENST00000556833 OR10J6PQ8NGY7 276 aa10.24□□□□□ -0.77
CHD8-211ENST00000556833 TMPRSS5Q9H3S3 457 aa10.24□□□□□ -0.77
CHD8-211ENST00000556833 ZNF331Q9NQX6 463 aaPredicted RBP10.24□□□□□ -0.77
CHD8-211ENST00000556833 DNAH5Q8TE73 4624 aa10.24□□□□□ -0.77
CHD8-211ENST00000556833 TRAV12-3A0A0B4J271 114 aa10.23□□□□□ -0.77
CHD8-211ENST00000556833 GOSR2O14653 212 aa10.23□□□□□ -0.77
CHD8-211ENST00000556833 RLN2P04090 185 aa10.23□□□□□ -0.77
CHD8-211ENST00000556833 SELENOTP62341 195 aa10.23□□□□□ -0.77
CHD8-211ENST00000556833 ARL16Q0P5N6 197 aa10.23□□□□□ -0.77
CHD8-211ENST00000556833 TEPPQ6URK8 271 aa10.23□□□□□ -0.77
CHD8-211ENST00000556833 LCN15Q6UWW0 184 aa10.23□□□□□ -0.77
CHD8-211ENST00000556833 ZNF493Q6ZR52 646 aa10.23□□□□□ -0.77
CHD8-211ENST00000556833 CCDC28AQ8IWP9 274 aa10.23□□□□□ -0.77
CHD8-211ENST00000556833 RXFP4Q8TDU9 374 aa10.23□□□□□ -0.77
CHD8-211ENST00000556833 BCL7BQ9BQE9 202 aa10.23□□□□□ -0.77
CHD8-211ENST00000556833 GSKIPQ9P0R6 139 aa10.23□□□□□ -0.77
CHD8-211ENST00000556833 CCDC160A6NGH7 325 aa10.22□□□□□ -0.77
CHD8-211ENST00000556833 SNURFLB1AK76 121 aa10.22□□□□□ -0.77
CHD8-211ENST00000556833 AGPAT2O15120 278 aa10.22□□□□□ -0.77
CHD8-211ENST00000556833 COX7A2P2O60397 106 aa10.22□□□□□ -0.77
CHD8-211ENST00000556833 TTC32Q5I0X7 151 aa10.22□□□□□ -0.77
CHD8-211ENST00000556833 TMEM14EPQ6UXP3 125 aa10.22□□□□□ -0.77
CHD8-211ENST00000556833 Q6ZTI0 123 aa10.22□□□□□ -0.77
CHD8-211ENST00000556833 OR10P1Q8NGE3 313 aa10.22□□□□□ -0.77
CHD8-211ENST00000556833 SMIM8Q96KF7 97 aa10.22□□□□□ -0.77
CHD8-211ENST00000556833 Q9H3A6 140 aa10.22□□□□□ -0.77
CHD8-211ENST00000556833 NPVFQ9HCQ7 196 aa10.22□□□□□ -0.77
CHD8-211ENST00000556833 TRAV5A0A0B4J249 113 aa10.21□□□□□ -0.77
CHD8-211ENST00000556833 OPCMLQ14982 345 aa10.21□□□□□ -0.77
CHD8-211ENST00000556833 IAH1Q2TAA2 248 aaPredicted RBP10.21□□□□□ -0.77
CHD8-211ENST00000556833 C4orf46Q504U0 113 aa10.21□□□□□ -0.77
CHD8-211ENST00000556833 ZBTB8BQ8NAP8 495 aaPredicted RBP10.21□□□□□ -0.77
CHD8-211ENST00000556833 MGST2Q99735 147 aa10.21□□□□□ -0.77
CHD8-211ENST00000556833 SLC50A1Q9BRV3 221 aa10.21□□□□□ -0.77
CHD8-211ENST00000556833 RCL1Q9Y2P8 373 aaKnown RBP10.21□□□□□ -0.77
CHD8-211ENST00000556833 H3BQ15 152 aa10.2□□□□□ -0.78
CHD8-211ENST00000556833 CCSO14618 274 aa10.2□□□□□ -0.78
CHD8-211ENST00000556833 OR4E1P0C645 316 aa10.2□□□□□ -0.78
CHD8-211ENST00000556833 CT45A10P0DMU9 189 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms