RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 GATA2P23769 480 aaPredicted RBP7.55□□□□□ -1.2
SHMT2-224ENST00000556737 LYZP61626 148 aa7.55□□□□□ -1.2
SHMT2-224ENST00000556737 SERF2P84101 59 aa7.55□□□□□ -1.2
SHMT2-224ENST00000556737 TMEM41BQ5BJD5 291 aa7.55□□□□□ -1.2
SHMT2-224ENST00000556737 FAM122CQ6P4D5 195 aa7.55□□□□□ -1.2
SHMT2-224ENST00000556737 SIGLEC15Q6ZMC9 328 aa7.55□□□□□ -1.2
SHMT2-224ENST00000556737 GATAD1Q8WUU5 269 aa7.55□□□□□ -1.2
SHMT2-224ENST00000556737 TRGV9Q99603 122 aa7.55□□□□□ -1.2
SHMT2-224ENST00000556737 SLC39A9Q9NUM3 307 aa7.55□□□□□ -1.2
SHMT2-224ENST00000556737 DOK5Q9P104 306 aa7.55□□□□□ -1.2
SHMT2-224ENST00000556737 A0A1B0GV50 99 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 A0A1W2PPV4 95 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 KNCNA6PVL3 124 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 UMAD1C9J7I0 102 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 RGS13O14921 159 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 COX7A2P2O60397 106 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 OR5G3P0C626 314 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 RPL29P47914 159 aaKnown RBP7.54□□□□□ -1.2
SHMT2-224ENST00000556737 SULT1A2P50226 295 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 RAB5CP51148 216 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 RAB2AP61019 212 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 SELENOTP62341 195 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 OR10G4Q8NGN3 311 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 OR10G9Q8NGN4 311 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 OR10G7Q8NGN6 311 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 OR1B1Q8NGR6 318 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 LRRC20Q8TCA0 184 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 C11orf68Q9H3H3 251 aaKnown RBP7.54□□□□□ -1.2
SHMT2-224ENST00000556737 NRN1Q9NPD7 142 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 SLC45A2Q9UMX9 530 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 DNAH6Q9C0G6 4158 aa7.54□□□□□ -1.2
SHMT2-224ENST00000556737 AGRNO00468 2067 aa7.53□□□□□ -1.2
SHMT2-224ENST00000556737 KMT2AQ03164 3969 aa7.53□□□□□ -1.2
SHMT2-224ENST00000556737 SOCS3O14543 225 aa7.53□□□□□ -1.2
SHMT2-224ENST00000556737 ORM2P19652 201 aa7.53□□□□□ -1.2
SHMT2-224ENST00000556737 M6PRP20645 277 aa7.53□□□□□ -1.2
SHMT2-224ENST00000556737 FHITP49789 147 aa7.53□□□□□ -1.2
SHMT2-224ENST00000556737 BLOC1S1P78537 153 aa7.53□□□□□ -1.2
SHMT2-224ENST00000556737 PMS2P11Q13670 270 aa7.53□□□□□ -1.2
SHMT2-224ENST00000556737 PSMG4Q5JS54 123 aa7.53□□□□□ -1.2
SHMT2-224ENST00000556737 STHQ8IWL8 128 aa7.53□□□□□ -1.2
SHMT2-224ENST00000556737 IQCF2Q8IXL9 164 aa7.53□□□□□ -1.2
SHMT2-224ENST00000556737 OR1L4Q8NGR5 311 aa7.53□□□□□ -1.2
SHMT2-224ENST00000556737 ACTR3CQ9C0K3 210 aaPredicted RBP7.53□□□□□ -1.2
SHMT2-224ENST00000556737 SLC25A22Q9H936 323 aa7.53□□□□□ -1.2
SHMT2-224ENST00000556737 TEX46H3BTG2 121 aa7.52□□□□□ -1.21
SHMT2-224ENST00000556737 HMGB3O15347 200 aaKnown RBP7.52□□□□□ -1.21
SHMT2-224ENST00000556737 H2AFB1P0C5Y9 115 aa7.52□□□□□ -1.21
SHMT2-224ENST00000556737 CDC34P49427 236 aaPredicted RBP7.52□□□□□ -1.21
SHMT2-224ENST00000556737 GCSAMLQ5JQS6 135 aa7.52□□□□□ -1.21
SHMT2-224ENST00000556737 ACTL10Q5JWF8 245 aa7.52□□□□□ -1.21
SHMT2-224ENST00000556737 C10orf113Q5VZT2 155 aa7.52□□□□□ -1.21
SHMT2-224ENST00000556737 DPPA3Q6W0C5 159 aa7.52□□□□□ -1.21
SHMT2-224ENST00000556737 Q8NAQ8 132 aa7.52□□□□□ -1.21
SHMT2-224ENST00000556737 PFDN5Q99471 154 aa7.52□□□□□ -1.21
SHMT2-224ENST00000556737 RARRES2Q99969 163 aa7.52□□□□□ -1.21
SHMT2-224ENST00000556737 SEPSECSQ9HD40 501 aaKnown RBP7.52□□□□□ -1.21
SHMT2-224ENST00000556737 RPRMQ9NS64 109 aa7.52□□□□□ -1.21
SHMT2-224ENST00000556737 CXorf65A6NEN9 183 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 HYPMO75409 117 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 EIF3GO75821 320 aaKnown RBP eCLIP7.51□□□□□ -1.21
SHMT2-224ENST00000556737 RHOBP62745 196 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 PRR20EP86478 221 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 PRR20CP86479 221 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 PRR20DP86480 221 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 PRR20BP86481 221 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 PRR20AP86496 221 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 CLLU1Q5K131 121 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 C1orf194Q5T5A4 169 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 PXDC1Q5TGL8 231 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 FAM78BQ5VT40 261 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 MORN3Q6PF18 240 aaPredicted RBP7.51□□□□□ -1.21
SHMT2-224ENST00000556737 LCN15Q6UWW0 184 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 CSNK1G2-AS1Q8NCQ2 148 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 OR11H2Q8NH07 326 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 SFT2D1Q8WV19 159 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 C17orf77Q96MU5 243 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 HRH4Q9H3N8 390 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 PLA2G2EQ9NZK7 142 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 PFDN2Q9UHV9 154 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 HIGD1AQ9Y241 93 aa7.51□□□□□ -1.21
SHMT2-224ENST00000556737 VPS13DQ5THJ4 4388 aa7.5□□□□□ -1.21
SHMT2-224ENST00000556737 CTXND1A0A1B0GTU2 59 aa7.5□□□□□ -1.21
SHMT2-224ENST00000556737 MAP1LC3B2A6NCE7 125 aa7.5□□□□□ -1.21
SHMT2-224ENST00000556737 NUPR2A6NF83 97 aa7.5□□□□□ -1.21
SHMT2-224ENST00000556737 NMBP08949 121 aa7.5□□□□□ -1.21
SHMT2-224ENST00000556737 FGF8P55075 233 aaPredicted RBP7.5□□□□□ -1.21
SHMT2-224ENST00000556737 DEFB1P60022 68 aa7.5□□□□□ -1.21
SHMT2-224ENST00000556737 SNRPD3P62318 126 aaKnown RBP7.5□□□□□ -1.21
SHMT2-224ENST00000556737 GDF5OSQ5U4N7 250 aa7.5□□□□□ -1.21
SHMT2-224ENST00000556737 SAT2Q96F10 170 aaPredicted RBP7.5□□□□□ -1.21
SHMT2-224ENST00000556737 MAP1LC3BQ9GZQ8 125 aa7.5□□□□□ -1.21
SHMT2-224ENST00000556737 DNAJC4Q9NNZ3 241 aa7.5□□□□□ -1.21
SHMT2-224ENST00000556737 X6R8D5 127 aa7.5□□□□□ -1.21
SHMT2-224ENST00000556737 ELOA3CA0A087WX78 387 aaPredicted RBP7.49□□□□□ -1.21
SHMT2-224ENST00000556737 H3BMM0 161 aa7.49□□□□□ -1.21
SHMT2-224ENST00000556737 H3BRN7 92 aa7.49□□□□□ -1.21
SHMT2-224ENST00000556737 DEFB4AO15263 64 aa7.49□□□□□ -1.21
SHMT2-224ENST00000556737 HBE1P02100 147 aa7.49□□□□□ -1.21
SHMT2-224ENST00000556737 HLA-DRB4P13762 266 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms