RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 MMP7P09237 267 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-209ENST00000556353 PGA4P0DJD7 388 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 PGA3P0DJD8 388 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 HIST1H1DP16402 221 aaKnown RBP2.87□□□□□ -1.95
PRPF39-209ENST00000556353 RAB5AP20339 215 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 FKBP2P26885 142 aaKnown RBP2.87□□□□□ -1.95
PRPF39-209ENST00000556353 CNTFRP26992 372 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 POLR2JP52435 117 aaKnown RBP2.87□□□□□ -1.95
PRPF39-209ENST00000556353 EMP1P54849 157 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 MTPNP58546 118 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 UBE2NP61088 152 aaKnown RBP2.87□□□□□ -1.95
PRPF39-209ENST00000556353 LCN6P62502 163 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 GNG5P63218 68 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 RPL18AQ02543 176 aaKnown RBP2.87□□□□□ -1.95
PRPF39-209ENST00000556353 HSD52Q0P140 79 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 SMAGPQ0VAQ4 97 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 C12orf54Q6X4T0 127 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 GOLT1AQ6ZVE7 132 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 GTF2H5Q6ZYL4 71 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 SLC35E3Q7Z769 313 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 ZNF101Q8IZC7 436 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 OR2T4Q8NH00 348 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 PP6455Q8WZ26 134 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 TMEM54Q969K7 222 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 PLEKHB2Q96CS7 222 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 ACY3Q96HD9 319 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 SCGB3A2Q96PL1 93 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 RARRES2Q99969 163 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 PRSS27Q9BQR3 290 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 MIEN1Q9BRT3 115 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 PLA2G12AQ9BZM1 189 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 MED28Q9H204 178 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 PRO1933Q9H354 126 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 REEP1Q9H902 201 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 HES4Q9HCC6 221 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 SMCO4Q9NRQ5 59 aa2.87□□□□□ -1.95
PRPF39-209ENST00000556353 PLECQ15149 4684 aaKnown RBP2.87□□□□□ -1.95
PRPF39-209ENST00000556353 CPSF4LA6NMK7 179 aaKnown RBP2.86□□□□□ -1.95
PRPF39-209ENST00000556353 C9JAW5 83 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 G3V3Q6 166 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-209ENST00000556353 M0R233 179 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 CDC42EP2O14613 210 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 ZNF324O75467 553 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-209ENST00000556353 MPC2O95563 127 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 MSMBP08118 114 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 ASAH2BP0C7U1 165 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 VDAC1P21796 283 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 MPV17P39210 176 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 RPS10P46783 165 aaKnown RBP2.86□□□□□ -1.95
PRPF39-209ENST00000556353 SLC18A1P54219 525 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 NDUFA6P56556 154 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 IFITM3Q01628 133 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 MEF2BQ02080 365 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-209ENST00000556353 FOXI2Q6ZQN5 318 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 NEGR1Q7Z3B1 354 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 SLC22A24Q8N4F4 322 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 ZDHHC22Q8N966 263 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 FER1L6-AS1Q8NA97 138 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 TMEM229BQ8NBD8 167 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 OR51T1Q8NGJ9 327 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 PFN4Q8NHR9 129 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 CNIH3Q8TBE1 160 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 C7orf33Q8WU49 177 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 TMEM106AQ96A25 262 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 DERL3Q96Q80 235 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 ANAPC13Q9BS18 74 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 TMEM59Q9BXS4 323 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 SMIM3Q9BZL3 60 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 CHST6Q9GZX3 395 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 PBOV1Q9GZY1 135 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 OR2D2Q9H210 308 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 OR52D1Q9H346 318 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 DYNLRB1Q9NP97 96 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 OR5AC2Q9NZP5 309 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 CCDC167Q9P0B6 97 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 HIGD1AQ9Y241 93 aa2.86□□□□□ -1.95
PRPF39-209ENST00000556353 SOX21Q9Y651 276 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-209ENST00000556353 TEX50A0A1B0GTY4 177 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 DUXBA0A1W2PPF3 345 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 A6NDN8 102 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 MEIS3P1A6NDR6 274 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 OR2T1O43869 369 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 YIF1AO95070 293 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 UBL3O95164 117 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 NDUFC2O95298 119 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 OR2H2O95918 312 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 IGHV1-46P01743 117 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 MAS1P04201 325 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 CD55P08174 381 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 LGALS1P09382 135 aaKnown RBP2.85□□□□□ -1.95
PRPF39-209ENST00000556353 AKAIN1P0CW23 69 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 RPL7P18124 248 aaKnown RBP2.85□□□□□ -1.95
PRPF39-209ENST00000556353 ATF1P18846 271 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 PRTN3P24158 256 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 CCL8P80075 99 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 RPL18Q07020 188 aaKnown RBP2.85□□□□□ -1.95
PRPF39-209ENST00000556353 C1DQ13901 141 aaKnown RBP2.85□□□□□ -1.95
PRPF39-209ENST00000556353 UBE2V2Q15819 145 aa2.85□□□□□ -1.95
PRPF39-209ENST00000556353 BATFQ16520 125 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms