RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 AAMDCQ9H7C9 122 aa5.71□□□□□ -1.5
TDP1-214ENST00000556063 TUBA4BQ9H853 241 aa5.71□□□□□ -1.5
TDP1-214ENST00000556063 AURKAIP1Q9NWT8 199 aaPredicted RBP5.71□□□□□ -1.5
TDP1-214ENST00000556063 RFNGQ9Y644 331 aa5.71□□□□□ -1.5
TDP1-214ENST00000556063 PKD1L1Q8TDX9 2849 aa5.7□□□□□ -1.5
TDP1-214ENST00000556063 TEX46H3BTG2 121 aa5.7□□□□□ -1.5
TDP1-214ENST00000556063 MRPS12O15235 138 aaKnown RBP5.7□□□□□ -1.5
TDP1-214ENST00000556063 CXorf1O96002 111 aa5.7□□□□□ -1.5
TDP1-214ENST00000556063 ZNF688P0C7X2 276 aa5.7□□□□□ -1.5
TDP1-214ENST00000556063 IGLC2P0DOY2 106 aa5.7□□□□□ -1.5
TDP1-214ENST00000556063 NKX2-5P52952 324 aaPredicted RBP5.7□□□□□ -1.5
TDP1-214ENST00000556063 DEFB131AP59861 70 aa5.7□□□□□ -1.5
TDP1-214ENST00000556063 UBE2L3P68036 154 aaKnown RBP5.7□□□□□ -1.5
TDP1-214ENST00000556063 PSG9Q00887 426 aa5.7□□□□□ -1.5
TDP1-214ENST00000556063 DEFB121Q5J5C9 76 aa5.7□□□□□ -1.5
TDP1-214ENST00000556063 PSMG4Q5JS54 123 aa5.7□□□□□ -1.5
TDP1-214ENST00000556063 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.7□□□□□ -1.5
TDP1-214ENST00000556063 Q8N1Y9 231 aa5.7□□□□□ -1.5
TDP1-214ENST00000556063 MRAPQ8TCY5 172 aa5.7□□□□□ -1.5
TDP1-214ENST00000556063 RNF141Q8WVD5 230 aa5.7□□□□□ -1.5
TDP1-214ENST00000556063 PHYHIPLQ96FC7 376 aa5.7□□□□□ -1.5
TDP1-214ENST00000556063 LINC00052Q96N35 136 aa5.7□□□□□ -1.5
TDP1-214ENST00000556063 MAP6D1Q9H9H5 199 aa5.7□□□□□ -1.5
TDP1-214ENST00000556063 PRELID1Q9Y255 219 aa5.7□□□□□ -1.5
TDP1-214ENST00000556063 TRBV19A0A075B6N1 114 aa5.69□□□□□ -1.5
TDP1-214ENST00000556063 H3BQ15 152 aa5.69□□□□□ -1.5
TDP1-214ENST00000556063 SOCS3O14543 225 aa5.69□□□□□ -1.5
TDP1-214ENST00000556063 PRB2P02812 416 aaPredicted RBP5.69□□□□□ -1.5
TDP1-214ENST00000556063 OR10J4P0C629 311 aa5.69□□□□□ -1.5
TDP1-214ENST00000556063 STAG3L2P0CL84 134 aa5.69□□□□□ -1.5
TDP1-214ENST00000556063 STAG3L3P0CL85 134 aa5.69□□□□□ -1.5
TDP1-214ENST00000556063 PYYP10082 97 aa5.69□□□□□ -1.5
TDP1-214ENST00000556063 ODF3L2Q3SX64 289 aa5.69□□□□□ -1.5
TDP1-214ENST00000556063 FAM74A1Q5RGS3 127 aa5.69□□□□□ -1.5
TDP1-214ENST00000556063 EBLN2Q6P2I7 272 aa5.69□□□□□ -1.5
TDP1-214ENST00000556063 IQCF2Q8IXL9 164 aa5.69□□□□□ -1.5
TDP1-214ENST00000556063 LYPD1Q8N2G4 141 aa5.69□□□□□ -1.5
TDP1-214ENST00000556063 FAM213BQ8TBF2 198 aa5.69□□□□□ -1.5
TDP1-214ENST00000556063 BLNKQ8WV28 456 aa5.69□□□□□ -1.5
TDP1-214ENST00000556063 SRD5A3Q9H8P0 318 aa5.69□□□□□ -1.5
TDP1-214ENST00000556063 ZNF331Q9NQX6 463 aaPredicted RBP5.69□□□□□ -1.5
TDP1-214ENST00000556063 TMEM167BQ9NRX6 74 aa5.69□□□□□ -1.5
TDP1-214ENST00000556063 ZNF586Q9NXT0 402 aa5.69□□□□□ -1.5
TDP1-214ENST00000556063 UBQLN2Q9UHD9 624 aa5.69□□□□□ -1.5
TDP1-214ENST00000556063 AGRNO00468 2067 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 MAP1LC3B2A6NCE7 125 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 A8MZ25 164 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 BOLA2-SMG1P6H3BVE0 249 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 K7EIL1 84 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 HMGB3O15347 200 aaKnown RBP5.68□□□□□ -1.5
TDP1-214ENST00000556063 HBE1P02100 147 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 H2AFB1P0C5Y9 115 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 ARL14EPLP0DKL9 152 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 IGHV4-30-4P0DP06 118 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 GCHFRP30047 84 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 CSN1S1P47710 185 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 SULT1A2P50226 295 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 PSG3Q16557 428 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 FOXI2Q6ZQN5 318 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 STHQ8IWL8 128 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 DEFB125Q8N687 156 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 ZNF738Q8NE65 137 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 SFT2D1Q8WV19 159 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 FXYD5Q96DB9 178 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 MRPL53Q96EL3 112 aaKnown RBP5.68□□□□□ -1.5
TDP1-214ENST00000556063 MAP1LC3BQ9GZQ8 125 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 C19orf73Q9NVV2 129 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 TRRAPQ9Y4A5 3859 aa5.68□□□□□ -1.5
TDP1-214ENST00000556063 LOC102724200A0A096LPH7 203 aaPredicted RBP5.67□□□□□ -1.5
TDP1-214ENST00000556063 TRAV8-2A0A0B4J237 113 aa5.67□□□□□ -1.5
TDP1-214ENST00000556063 H3BTX0 84 aa5.67□□□□□ -1.5
TDP1-214ENST00000556063 DUSP14O95147 198 aaKnown RBP5.67□□□□□ -1.5
TDP1-214ENST00000556063 SNRPCP09234 159 aaKnown RBP5.67□□□□□ -1.5
TDP1-214ENST00000556063 PPT1P50897 306 aa5.67□□□□□ -1.5
TDP1-214ENST00000556063 APOC4P55056 127 aa5.67□□□□□ -1.5
TDP1-214ENST00000556063 NUTF2P61970 127 aaKnown RBP5.67□□□□□ -1.5
TDP1-214ENST00000556063 RANP62826 216 aaKnown RBP5.67□□□□□ -1.5
TDP1-214ENST00000556063 ACTL10Q5JWF8 245 aa5.67□□□□□ -1.5
TDP1-214ENST00000556063 APRG1Q8IVJ8 170 aa5.67□□□□□ -1.5
TDP1-214ENST00000556063 FAM24BQ8N5W8 94 aa5.67□□□□□ -1.5
TDP1-214ENST00000556063 CMTM2Q8TAZ6 248 aa5.67□□□□□ -1.5
TDP1-214ENST00000556063 RXFP4Q8TDU9 374 aa5.67□□□□□ -1.5
TDP1-214ENST00000556063 MBD3L1Q8WWY6 194 aa5.67□□□□□ -1.5
TDP1-214ENST00000556063 RPUSD4Q96CM3 377 aaKnown RBP5.67□□□□□ -1.5
TDP1-214ENST00000556063 SAT2Q96F10 170 aaPredicted RBP5.67□□□□□ -1.5
TDP1-214ENST00000556063 ZNF503Q96F45 646 aa5.67□□□□□ -1.5
TDP1-214ENST00000556063 C17orf77Q96MU5 243 aa5.67□□□□□ -1.5
TDP1-214ENST00000556063 NKX6-2Q9C056 277 aaPredicted RBP5.67□□□□□ -1.5
TDP1-214ENST00000556063 TRAV1-1A0A0B4J248 108 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 KIR2DL5BA0A0G2JN68 375 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 KIR2DL5BA0A0G2JPC4 375 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 KNCNA6PVL3 124 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 ZNF705EA8MWA4 302 aaPredicted RBP5.66□□□□□ -1.5
TDP1-214ENST00000556063 SLC17A3O00476 420 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 UBE2CO00762 179 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 EIF3GO75821 320 aaKnown RBP eCLIP5.66□□□□□ -1.5
TDP1-214ENST00000556063 NDUFB4O95168 129 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 IFNA7P01567 189 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 FRMD6-AS1P0C7T7 363 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 HLA-DRB4P13762 266 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms