RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 PRAC2D3DTV9 90 aa9.92□□□□□ -0.82
CHMP4BP1-201ENST00000556017 H3BMQ9 156 aa9.92□□□□□ -0.82
CHMP4BP1-201ENST00000556017 K7EPK0 472 aa9.92□□□□□ -0.82
CHMP4BP1-201ENST00000556017 IL5P05113 134 aa9.92□□□□□ -0.82
CHMP4BP1-201ENST00000556017 LINC00869P0C866 280 aa9.92□□□□□ -0.82
CHMP4BP1-201ENST00000556017 TMBIM6P55061 237 aa9.92□□□□□ -0.82
CHMP4BP1-201ENST00000556017 ESRGQ1W209 222 aa9.92□□□□□ -0.82
CHMP4BP1-201ENST00000556017 TMEM263Q8WUH6 116 aaKnown RBP9.92□□□□□ -0.82
CHMP4BP1-201ENST00000556017 BCL7BQ9BQE9 202 aa9.92□□□□□ -0.82
CHMP4BP1-201ENST00000556017 STRAPQ9Y3F4 350 aaKnown RBP9.92□□□□□ -0.82
CHMP4BP1-201ENST00000556017 TRAV26-1A0A087WT03 109 aa9.91□□□□□ -0.82
CHMP4BP1-201ENST00000556017 PIGBOS1A0A0B4J2F0 54 aa9.91□□□□□ -0.82
CHMP4BP1-201ENST00000556017 ZNF701M0R085 212 aaPredicted RBP9.91□□□□□ -0.82
CHMP4BP1-201ENST00000556017 HYPMO75409 117 aa9.91□□□□□ -0.82
CHMP4BP1-201ENST00000556017 SNRPCP09234 159 aaKnown RBP9.91□□□□□ -0.82
CHMP4BP1-201ENST00000556017 HTN1P15515 57 aa9.91□□□□□ -0.82
CHMP4BP1-201ENST00000556017 CDKN1BP46527 198 aa9.91□□□□□ -0.82
CHMP4BP1-201ENST00000556017 RHOBP62745 196 aa9.91□□□□□ -0.82
CHMP4BP1-201ENST00000556017 RPP30P78346 268 aaKnown RBP9.91□□□□□ -0.82
CHMP4BP1-201ENST00000556017 MORN5Q5VZ52 161 aa9.91□□□□□ -0.82
CHMP4BP1-201ENST00000556017 TMEM14EPQ6UXP3 125 aa9.91□□□□□ -0.82
CHMP4BP1-201ENST00000556017 ZNF493Q6ZR52 646 aa9.91□□□□□ -0.82
CHMP4BP1-201ENST00000556017 RPUSD4Q96CM3 377 aaKnown RBP9.91□□□□□ -0.82
CHMP4BP1-201ENST00000556017 SLC25A21Q9BQT8 299 aaPredicted RBP9.91□□□□□ -0.82
CHMP4BP1-201ENST00000556017 UPK3BQ9BT76 320 aa9.91□□□□□ -0.82
CHMP4BP1-201ENST00000556017 SCRT2Q9NQ03 307 aa9.91□□□□□ -0.82
CHMP4BP1-201ENST00000556017 ZNF331Q9NQX6 463 aaPredicted RBP9.91□□□□□ -0.82
CHMP4BP1-201ENST00000556017 SLC17A3O00476 420 aa9.9□□□□□ -0.82
CHMP4BP1-201ENST00000556017 OR5G3P0C626 314 aa9.9□□□□□ -0.82
CHMP4BP1-201ENST00000556017 RAP2BP61225 183 aa9.9□□□□□ -0.82
CHMP4BP1-201ENST00000556017 ARL16Q0P5N6 197 aa9.9□□□□□ -0.82
CHMP4BP1-201ENST00000556017 GFI1BQ5VTD9 330 aa9.9□□□□□ -0.82
CHMP4BP1-201ENST00000556017 Q6ZRN7 208 aaPredicted RBP9.9□□□□□ -0.82
CHMP4BP1-201ENST00000556017 RXFP4Q8TDU9 374 aa9.9□□□□□ -0.82
CHMP4BP1-201ENST00000556017 ZNF503Q96F45 646 aa9.9□□□□□ -0.82
CHMP4BP1-201ENST00000556017 ARL6Q9H0F7 186 aa9.9□□□□□ -0.82
CHMP4BP1-201ENST00000556017 LINC00854A0A1B0GVQ3 168 aa9.89□□□□□ -0.83
CHMP4BP1-201ENST00000556017 C9orf170A2RU37 121 aa9.89□□□□□ -0.83
CHMP4BP1-201ENST00000556017 SMCO3A2RU48 225 aa9.89□□□□□ -0.83
CHMP4BP1-201ENST00000556017 H7BYZ3 331 aa9.89□□□□□ -0.83
CHMP4BP1-201ENST00000556017 BTF3P20290 206 aaKnown RBP9.89□□□□□ -0.83
CHMP4BP1-201ENST00000556017 FAUP35544 74 aaKnown RBP9.89□□□□□ -0.83
CHMP4BP1-201ENST00000556017 SELENOTP62341 195 aa9.89□□□□□ -0.83
CHMP4BP1-201ENST00000556017 DLK1P80370 383 aa9.89□□□□□ -0.83
CHMP4BP1-201ENST00000556017 TOMM5Q8N4H5 51 aa9.89□□□□□ -0.83
CHMP4BP1-201ENST00000556017 MCFD2Q8NI22 146 aa9.89□□□□□ -0.83
CHMP4BP1-201ENST00000556017 SMIM8Q96KF7 97 aa9.89□□□□□ -0.83
CHMP4BP1-201ENST00000556017 ARV1Q9H2C2 271 aa9.89□□□□□ -0.83
CHMP4BP1-201ENST00000556017 PSENENQ9NZ42 101 aa9.89□□□□□ -0.83
CHMP4BP1-201ENST00000556017 A0A0J9YY99 117 aa9.88□□□□□ -0.83
CHMP4BP1-201ENST00000556017 FNDC10F2Z333 226 aa9.88□□□□□ -0.83
CHMP4BP1-201ENST00000556017 METTL15P1P0C7V9 234 aa9.88□□□□□ -0.83
CHMP4BP1-201ENST00000556017 M6PRP20645 277 aa9.88□□□□□ -0.83
CHMP4BP1-201ENST00000556017 RRAS2P62070 204 aaPredicted RBP9.88□□□□□ -0.83
CHMP4BP1-201ENST00000556017 SLC38A11Q08AI6 406 aa9.88□□□□□ -0.83
CHMP4BP1-201ENST00000556017 OR5I1Q13606 314 aa9.88□□□□□ -0.83
CHMP4BP1-201ENST00000556017 CLINT1Q14677 625 aa9.88□□□□□ -0.83
CHMP4BP1-201ENST00000556017 TMEM37Q8WXS4 190 aa9.88□□□□□ -0.83
CHMP4BP1-201ENST00000556017 GNPNAT1Q96EK6 184 aaPredicted RBP9.88□□□□□ -0.83
CHMP4BP1-201ENST00000556017 SAT2Q96F10 170 aaPredicted RBP9.88□□□□□ -0.83
CHMP4BP1-201ENST00000556017 VSIG2Q96IQ7 327 aa9.88□□□□□ -0.83
CHMP4BP1-201ENST00000556017 H3BQ15 152 aa9.87□□□□□ -0.83
CHMP4BP1-201ENST00000556017 H3BTX0 84 aa9.87□□□□□ -0.83
CHMP4BP1-201ENST00000556017 SSSCA1O60232 199 aa9.87□□□□□ -0.83
CHMP4BP1-201ENST00000556017 IGLC2P0DOY2 106 aa9.87□□□□□ -0.83
CHMP4BP1-201ENST00000556017 CXCL2P19875 107 aa9.87□□□□□ -0.83
CHMP4BP1-201ENST00000556017 S100A7P31151 101 aa9.87□□□□□ -0.83
CHMP4BP1-201ENST00000556017 AP3S2P59780 193 aa9.87□□□□□ -0.83
CHMP4BP1-201ENST00000556017 C4orf46Q504U0 113 aa9.87□□□□□ -0.83
CHMP4BP1-201ENST00000556017 PYDC2Q56P42 97 aa9.87□□□□□ -0.83
CHMP4BP1-201ENST00000556017 CCDC190Q86UF4 302 aa9.87□□□□□ -0.83
CHMP4BP1-201ENST00000556017 C20orf144Q9BQM9 153 aa9.87□□□□□ -0.83
CHMP4BP1-201ENST00000556017 NPVFQ9HCQ7 196 aa9.87□□□□□ -0.83
CHMP4BP1-201ENST00000556017 FLVCR2Q9UPI3 526 aa9.87□□□□□ -0.83
CHMP4BP1-201ENST00000556017 RCL1Q9Y2P8 373 aaKnown RBP9.87□□□□□ -0.83
CHMP4BP1-201ENST00000556017 MRPS16Q9Y3D3 137 aaKnown RBP9.87□□□□□ -0.83
CHMP4BP1-201ENST00000556017 MYCBP2O75592 4640 aa9.87□□□□□ -0.83
CHMP4BP1-201ENST00000556017 A0A1W2PPQ1 181 aa9.86□□□□□ -0.83
CHMP4BP1-201ENST00000556017 GAGE12BA1L429 117 aa9.86□□□□□ -0.83
CHMP4BP1-201ENST00000556017 H3BNG1 76 aa9.86□□□□□ -0.83
CHMP4BP1-201ENST00000556017 GAGE7O76087 117 aa9.86□□□□□ -0.83
CHMP4BP1-201ENST00000556017 GAGE12FP0CL80 117 aa9.86□□□□□ -0.83
CHMP4BP1-201ENST00000556017 GAGE12GP0CL81 117 aa9.86□□□□□ -0.83
CHMP4BP1-201ENST00000556017 GAGE12IP0CL82 117 aa9.86□□□□□ -0.83
CHMP4BP1-201ENST00000556017 CT45A10P0DMU9 189 aa9.86□□□□□ -0.83
CHMP4BP1-201ENST00000556017 UBE2MP61081 183 aaKnown RBP9.86□□□□□ -0.83
CHMP4BP1-201ENST00000556017 LCN15Q6UWW0 184 aa9.86□□□□□ -0.83
CHMP4BP1-201ENST00000556017 LINC00305Q7Z4B0 112 aa9.86□□□□□ -0.83
CHMP4BP1-201ENST00000556017 OR10J6PQ8NGY7 276 aa9.86□□□□□ -0.83
CHMP4BP1-201ENST00000556017 DEDD2Q8WXF8 326 aa9.86□□□□□ -0.83
CHMP4BP1-201ENST00000556017 TMPRSS5Q9H3S3 457 aa9.86□□□□□ -0.83
CHMP4BP1-201ENST00000556017 ZNF586Q9NXT0 402 aa9.86□□□□□ -0.83
CHMP4BP1-201ENST00000556017 DMBT1Q9UGM3 2413 aaPredicted RBP9.86□□□□□ -0.83
CHMP4BP1-201ENST00000556017 A0A096LPF7 62 aa9.85□□□□□ -0.83
CHMP4BP1-201ENST00000556017 FUSP35637 526 aaKnown RBP eCLIP9.85□□□□□ -0.83
CHMP4BP1-201ENST00000556017 OPCMLQ14982 345 aa9.85□□□□□ -0.83
CHMP4BP1-201ENST00000556017 TTC32Q5I0X7 151 aa9.85□□□□□ -0.83
CHMP4BP1-201ENST00000556017 TEPPQ6URK8 271 aa9.85□□□□□ -0.83
CHMP4BP1-201ENST00000556017 Q6ZTI0 123 aa9.85□□□□□ -0.83
CHMP4BP1-201ENST00000556017 C11orf72Q8NBR9 251 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms