RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 SPAG8Q99932 426 aaPredicted RBP8.5□□□□□ -1.05
SHMT2-220ENST00000555634 TXNDC17Q9BRA2 123 aa8.5□□□□□ -1.05
SHMT2-220ENST00000555634 TCEAL7Q9BRU2 100 aa8.5□□□□□ -1.05
SHMT2-220ENST00000555634 EIF5A2Q9GZV4 153 aaKnown RBP8.5□□□□□ -1.05
SHMT2-220ENST00000555634 MLXQ9UH92 298 aa8.5□□□□□ -1.05
SHMT2-220ENST00000555634 IGKV3-7A0A075B6H7 116 aa8.49□□□□□ -1.05
SHMT2-220ENST00000555634 TRBV19A0A075B6N1 114 aa8.49□□□□□ -1.05
SHMT2-220ENST00000555634 TRAV2A0A0B4J234 112 aa8.49□□□□□ -1.05
SHMT2-220ENST00000555634 IGLC2P0DOY2 106 aa8.49□□□□□ -1.05
SHMT2-220ENST00000555634 GUCA2BQ16661 112 aa8.49□□□□□ -1.05
SHMT2-220ENST00000555634 SUN5Q8TC36 379 aa8.49□□□□□ -1.05
SHMT2-220ENST00000555634 FXYD5Q96DB9 178 aa8.49□□□□□ -1.05
SHMT2-220ENST00000555634 FAM167A-AS1Q96KT0 104 aa8.49□□□□□ -1.05
SHMT2-220ENST00000555634 A0A1W2PRE2 83 aa8.48□□□□□ -1.05
SHMT2-220ENST00000555634 F6UZH7 168 aa8.48□□□□□ -1.05
SHMT2-220ENST00000555634 ISLRO14498 428 aa8.48□□□□□ -1.05
SHMT2-220ENST00000555634 TSPAN4O14817 238 aa8.48□□□□□ -1.05
SHMT2-220ENST00000555634 BCL2P10415 239 aa8.48□□□□□ -1.05
SHMT2-220ENST00000555634 CMC4P56277 68 aaPredicted RBP8.48□□□□□ -1.05
SHMT2-220ENST00000555634 UBE2G2P60604 165 aa8.48□□□□□ -1.05
SHMT2-220ENST00000555634 GTSCR1Q86UQ5 136 aa8.48□□□□□ -1.05
SHMT2-220ENST00000555634 RXFP4Q8TDU9 374 aa8.48□□□□□ -1.05
SHMT2-220ENST00000555634 ZNF414Q96IQ9 312 aa8.48□□□□□ -1.05
SHMT2-220ENST00000555634 OTORQ9NRC9 128 aa8.48□□□□□ -1.05
SHMT2-220ENST00000555634 VAX2Q9UIW0 290 aa8.48□□□□□ -1.05
SHMT2-220ENST00000555634 PRELID1Q9Y255 219 aa8.48□□□□□ -1.05
SHMT2-220ENST00000555634 COL6A5A8TX70 2615 aa8.48□□□□□ -1.05
SHMT2-220ENST00000555634 C11orf94C9JXX5 98 aa8.47□□□□□ -1.05
SHMT2-220ENST00000555634 PDE6DO43924 150 aa8.47□□□□□ -1.05
SHMT2-220ENST00000555634 EIF3GO75821 320 aaKnown RBP eCLIP8.47□□□□□ -1.05
SHMT2-220ENST00000555634 TFPI2P48307 235 aa8.47□□□□□ -1.05
SHMT2-220ENST00000555634 RANP62826 216 aaKnown RBP8.47□□□□□ -1.05
SHMT2-220ENST00000555634 MEF2BQ02080 365 aaPredicted RBP8.47□□□□□ -1.05
SHMT2-220ENST00000555634 PEA15Q15121 130 aa8.47□□□□□ -1.05
SHMT2-220ENST00000555634 NDUFA5Q16718 116 aa8.47□□□□□ -1.05
SHMT2-220ENST00000555634 HAGHQ16775 308 aa8.47□□□□□ -1.05
SHMT2-220ENST00000555634 DEFB114Q30KQ6 69 aa8.47□□□□□ -1.05
SHMT2-220ENST00000555634 CD300EQ496F6 205 aaPredicted RBP8.47□□□□□ -1.05
SHMT2-220ENST00000555634 TMEM61Q8N0U2 210 aa8.47□□□□□ -1.05
SHMT2-220ENST00000555634 GBGT1Q8N5D6 347 aa8.47□□□□□ -1.05
SHMT2-220ENST00000555634 C5orf17Q8NAS9 161 aa8.47□□□□□ -1.05
SHMT2-220ENST00000555634 ZNF738Q8NE65 137 aa8.47□□□□□ -1.05
SHMT2-220ENST00000555634 SPATA3Q8NHX4 192 aa8.47□□□□□ -1.05
SHMT2-220ENST00000555634 PCNPQ8WW12 178 aaKnown RBP8.47□□□□□ -1.05
SHMT2-220ENST00000555634 MS4A6AQ9H2W1 248 aa8.47□□□□□ -1.05
SHMT2-220ENST00000555634 Q9H3A6 140 aa8.47□□□□□ -1.05
SHMT2-220ENST00000555634 PLA2G2EQ9NZK7 142 aa8.47□□□□□ -1.05
SHMT2-220ENST00000555634 STAB1Q9NY15 2570 aa8.47□□□□□ -1.05
SHMT2-220ENST00000555634 SERTM2A0A1B0GWG4 89 aa8.46□□□□□ -1.06
SHMT2-220ENST00000555634 RBFOX3A6NFN3 312 aa8.46□□□□□ -1.06
SHMT2-220ENST00000555634 PAGE4O60829 102 aa8.46□□□□□ -1.06
SHMT2-220ENST00000555634 IGLV1-51P01701 117 aa8.46□□□□□ -1.06
SHMT2-220ENST00000555634 SLC25A5P05141 298 aaKnown RBP8.46□□□□□ -1.06
SHMT2-220ENST00000555634 PMS2P11Q13670 270 aa8.46□□□□□ -1.06
SHMT2-220ENST00000555634 TOR2AQ5JU69 321 aa8.46□□□□□ -1.06
SHMT2-220ENST00000555634 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.46□□□□□ -1.06
SHMT2-220ENST00000555634 WFDC3Q8IUB2 231 aa8.46□□□□□ -1.06
SHMT2-220ENST00000555634 LYPD6BQ8NI32 183 aa8.46□□□□□ -1.06
SHMT2-220ENST00000555634 MRPL53Q96EL3 112 aaKnown RBP8.46□□□□□ -1.06
SHMT2-220ENST00000555634 FAM210AQ96ND0 272 aa8.46□□□□□ -1.06
SHMT2-220ENST00000555634 MDFIQ99750 246 aa8.46□□□□□ -1.06
SHMT2-220ENST00000555634 TMPRSS5Q9H3S3 457 aa8.46□□□□□ -1.06
SHMT2-220ENST00000555634 SMDT1Q9H4I9 107 aa8.46□□□□□ -1.06
SHMT2-220ENST00000555634 ZNF586Q9NXT0 402 aa8.46□□□□□ -1.06
SHMT2-220ENST00000555634 RPH3ALQ9UNE2 315 aa8.46□□□□□ -1.06
SHMT2-220ENST00000555634 FBN1P35555 2871 aaKnown RBP8.45□□□□□ -1.06
SHMT2-220ENST00000555634 FAM74A7A6NL05 159 aa8.45□□□□□ -1.06
SHMT2-220ENST00000555634 H3BQ15 152 aa8.45□□□□□ -1.06
SHMT2-220ENST00000555634 H3BTX0 84 aa8.45□□□□□ -1.06
SHMT2-220ENST00000555634 MRPS12O15235 138 aaKnown RBP8.45□□□□□ -1.06
SHMT2-220ENST00000555634 EDN2P20800 178 aa8.45□□□□□ -1.06
SHMT2-220ENST00000555634 ICAM4Q14773 271 aa8.45□□□□□ -1.06
SHMT2-220ENST00000555634 FAM90A2PQ658T7 463 aa8.45□□□□□ -1.06
SHMT2-220ENST00000555634 COMMD7Q86VX2 200 aa8.45□□□□□ -1.06
SHMT2-220ENST00000555634 RPUSD4Q96CM3 377 aaKnown RBP8.45□□□□□ -1.06
SHMT2-220ENST00000555634 ZNF503Q96F45 646 aa8.45□□□□□ -1.06
SHMT2-220ENST00000555634 ZNF331Q9NQX6 463 aaPredicted RBP8.45□□□□□ -1.06
SHMT2-220ENST00000555634 LOC102723971A0A1B0GUV8 181 aa8.44□□□□□ -1.06
SHMT2-220ENST00000555634 RAB19A4D1S5 217 aa8.44□□□□□ -1.06
SHMT2-220ENST00000555634 PGPA6NDG6 321 aa8.44□□□□□ -1.06
SHMT2-220ENST00000555634 FBLL1A6NHQ2 334 aaKnown RBP8.44□□□□□ -1.06
SHMT2-220ENST00000555634 SLC17A3O00476 420 aa8.44□□□□□ -1.06
SHMT2-220ENST00000555634 SNRPCP09234 159 aaKnown RBP8.44□□□□□ -1.06
SHMT2-220ENST00000555634 ZNF506Q5JVG8 444 aa8.44□□□□□ -1.06
SHMT2-220ENST00000555634 EBLN2Q6P2I7 272 aa8.44□□□□□ -1.06
SHMT2-220ENST00000555634 UQCC3Q6UW78 93 aa8.44□□□□□ -1.06
SHMT2-220ENST00000555634 ARL6IP6Q8N6S5 226 aa8.44□□□□□ -1.06
SHMT2-220ENST00000555634 WFDC9Q8NEX5 89 aa8.44□□□□□ -1.06
SHMT2-220ENST00000555634 OR10J6PQ8NGY7 276 aa8.44□□□□□ -1.06
SHMT2-220ENST00000555634 HIST1H2BAQ96A08 127 aa8.44□□□□□ -1.06
SHMT2-220ENST00000555634 LINC00052Q96N35 136 aa8.44□□□□□ -1.06
SHMT2-220ENST00000555634 ATG101Q9BSB4 218 aa8.44□□□□□ -1.06
SHMT2-220ENST00000555634 TREM1Q9NP99 234 aa8.44□□□□□ -1.06
SHMT2-220ENST00000555634 MED9Q9NWA0 146 aa8.44□□□□□ -1.06
SHMT2-220ENST00000555634 OR11H12B2RN74 326 aa8.43□□□□□ -1.06
SHMT2-220ENST00000555634 K7EQG2 157 aa8.43□□□□□ -1.06
SHMT2-220ENST00000555634 ZNF688P0C7X2 276 aa8.43□□□□□ -1.06
SHMT2-220ENST00000555634 IGLL1P15814 213 aa8.43□□□□□ -1.06
SHMT2-220ENST00000555634 AKR1C3P42330 323 aa8.43□□□□□ -1.06
SHMT2-220ENST00000555634 CNN1P51911 297 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms