RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 STAG3L2P0CL84 134 aa10.64□□□□□ -0.71
CHD8-208ENST00000555301 STAG3L3P0CL85 134 aa10.64□□□□□ -0.71
CHD8-208ENST00000555301 PYYP10082 97 aa10.64□□□□□ -0.71
CHD8-208ENST00000555301 PDE6HQ13956 83 aa10.64□□□□□ -0.71
CHD8-208ENST00000555301 DPPA3Q6W0C5 159 aa10.64□□□□□ -0.71
CHD8-208ENST00000555301 FAM24BQ8N5W8 94 aa10.64□□□□□ -0.71
CHD8-208ENST00000555301 RNF141Q8WVD5 230 aa10.64□□□□□ -0.71
CHD8-208ENST00000555301 CLEC5AQ9NY25 188 aa10.64□□□□□ -0.71
CHD8-208ENST00000555301 UBQLN2Q9UHD9 624 aa10.64□□□□□ -0.71
CHD8-208ENST00000555301 TRBV19A0A075B6N1 114 aa10.63□□□□□ -0.71
CHD8-208ENST00000555301 CTXND1A0A1B0GTU2 59 aa10.63□□□□□ -0.71
CHD8-208ENST00000555301 H3BQ15 152 aa10.63□□□□□ -0.71
CHD8-208ENST00000555301 BOLA2-SMG1P6H3BVE0 249 aa10.63□□□□□ -0.71
CHD8-208ENST00000555301 K7EIL1 84 aa10.63□□□□□ -0.71
CHD8-208ENST00000555301 RAB5CP51148 216 aa10.63□□□□□ -0.71
CHD8-208ENST00000555301 DEFB131AP59861 70 aa10.63□□□□□ -0.71
CHD8-208ENST00000555301 UBE2L3P68036 154 aaKnown RBP10.63□□□□□ -0.71
CHD8-208ENST00000555301 PSMG4Q5JS54 123 aa10.63□□□□□ -0.71
CHD8-208ENST00000555301 SAT2Q96F10 170 aaPredicted RBP10.63□□□□□ -0.71
CHD8-208ENST00000555301 PHYHIPLQ96FC7 376 aa10.63□□□□□ -0.71
CHD8-208ENST00000555301 ZNF586Q9NXT0 402 aa10.63□□□□□ -0.71
CHD8-208ENST00000555301 A8MZ25 164 aa10.62□□□□□ -0.71
CHD8-208ENST00000555301 CXorf1O96002 111 aa10.62□□□□□ -0.71
CHD8-208ENST00000555301 SNRPCP09234 159 aaKnown RBP10.62□□□□□ -0.71
CHD8-208ENST00000555301 OR10J4P0C629 311 aa10.62□□□□□ -0.71
CHD8-208ENST00000555301 NBEAP1P0C6P0 100 aa10.62□□□□□ -0.71
CHD8-208ENST00000555301 PSG9Q00887 426 aa10.62□□□□□ -0.71
CHD8-208ENST00000555301 DEFB125Q8N687 156 aa10.62□□□□□ -0.71
CHD8-208ENST00000555301 FXYD5Q96DB9 178 aa10.62□□□□□ -0.71
CHD8-208ENST00000555301 ZNF503Q96F45 646 aa10.62□□□□□ -0.71
CHD8-208ENST00000555301 LINC00052Q96N35 136 aa10.62□□□□□ -0.71
CHD8-208ENST00000555301 TUBA4BQ9H853 241 aa10.62□□□□□ -0.71
CHD8-208ENST00000555301 ZNF331Q9NQX6 463 aaPredicted RBP10.62□□□□□ -0.71
CHD8-208ENST00000555301 BOLA1Q9Y3E2 137 aa10.62□□□□□ -0.71
CHD8-208ENST00000555301 TRAV8-2A0A0B4J237 113 aa10.61□□□□□ -0.71
CHD8-208ENST00000555301 HMGB3O15347 200 aaKnown RBP10.61□□□□□ -0.71
CHD8-208ENST00000555301 EIF3GO75821 320 aaKnown RBP eCLIP10.61□□□□□ -0.71
CHD8-208ENST00000555301 ARL14EPLP0DKL9 152 aa10.61□□□□□ -0.71
CHD8-208ENST00000555301 IGHV4-30-4P0DP06 118 aa10.61□□□□□ -0.71
CHD8-208ENST00000555301 ZNF726P1Q15940 193 aa10.61□□□□□ -0.71
CHD8-208ENST00000555301 DEFB121Q5J5C9 76 aa10.61□□□□□ -0.71
CHD8-208ENST00000555301 APRG1Q8IVJ8 170 aa10.61□□□□□ -0.71
CHD8-208ENST00000555301 FAM213BQ8TBF2 198 aa10.61□□□□□ -0.71
CHD8-208ENST00000555301 MRAPQ8TCY5 172 aa10.61□□□□□ -0.71
CHD8-208ENST00000555301 BLNKQ8WV28 456 aa10.61□□□□□ -0.71
CHD8-208ENST00000555301 WFDC10AQ9H1F0 79 aa10.61□□□□□ -0.71
CHD8-208ENST00000555301 PLA2G2EQ9NZK7 142 aa10.61□□□□□ -0.71
CHD8-208ENST00000555301 H3BTX0 84 aa10.6□□□□□ -0.71
CHD8-208ENST00000555301 SLC17A3O00476 420 aa10.6□□□□□ -0.71
CHD8-208ENST00000555301 SULT1A2P50226 295 aa10.6□□□□□ -0.71
CHD8-208ENST00000555301 AAMDCQ9H7C9 122 aa10.6□□□□□ -0.71
CHD8-208ENST00000555301 SRD5A3Q9H8P0 318 aa10.6□□□□□ -0.71
CHD8-208ENST00000555301 TMEM167BQ9NRX6 74 aa10.6□□□□□ -0.71
CHD8-208ENST00000555301 NBEAL1Q6ZS30 2694 aa10.6□□□□□ -0.71
CHD8-208ENST00000555301 DNAH3Q8TD57 4116 aa10.59□□□□□ -0.71
CHD8-208ENST00000555301 NOTCH1P46531 2555 aa10.59□□□□□ -0.71
CHD8-208ENST00000555301 MAP1LC3B2A6NCE7 125 aa10.59□□□□□ -0.71
CHD8-208ENST00000555301 NDUFB4O95168 129 aa10.59□□□□□ -0.71
CHD8-208ENST00000555301 GCHFRP30047 84 aa10.59□□□□□ -0.71
CHD8-208ENST00000555301 FHITP49789 147 aa10.59□□□□□ -0.71
CHD8-208ENST00000555301 PSG3Q16557 428 aa10.59□□□□□ -0.71
CHD8-208ENST00000555301 IGFL4Q6B9Z1 124 aa10.59□□□□□ -0.71
CHD8-208ENST00000555301 SSX7Q7RTT5 188 aa10.59□□□□□ -0.71
CHD8-208ENST00000555301 LYPD1Q8N2G4 141 aa10.59□□□□□ -0.71
CHD8-208ENST00000555301 RNF182Q8N6D2 247 aa10.59□□□□□ -0.71
CHD8-208ENST00000555301 MAP1LC3BQ9GZQ8 125 aa10.59□□□□□ -0.71
CHD8-208ENST00000555301 ZNF124Q15973 351 aa10.58□□□□□ -0.72
CHD8-208ENST00000555301 EBLN2Q6P2I7 272 aa10.58□□□□□ -0.72
CHD8-208ENST00000555301 FOXI2Q6ZQN5 318 aa10.58□□□□□ -0.72
CHD8-208ENST00000555301 STHQ8IWL8 128 aa10.58□□□□□ -0.72
CHD8-208ENST00000555301 IQCF2Q8IXL9 164 aa10.58□□□□□ -0.72
CHD8-208ENST00000555301 ZNF738Q8NE65 137 aa10.58□□□□□ -0.72
CHD8-208ENST00000555301 SUN5Q8TC36 379 aa10.58□□□□□ -0.72
CHD8-208ENST00000555301 MBD3L1Q8WWY6 194 aa10.58□□□□□ -0.72
CHD8-208ENST00000555301 MRPL53Q96EL3 112 aaKnown RBP10.58□□□□□ -0.72
CHD8-208ENST00000555301 C20orf173Q96LM9 149 aa10.58□□□□□ -0.72
CHD8-208ENST00000555301 CITED4Q96RK1 184 aa10.58□□□□□ -0.72
CHD8-208ENST00000555301 PRELID1Q9Y255 219 aa10.58□□□□□ -0.72
CHD8-208ENST00000555301 LOC102724200A0A096LPH7 203 aaPredicted RBP10.57□□□□□ -0.72
CHD8-208ENST00000555301 H2AFB1P0C5Y9 115 aa10.57□□□□□ -0.72
CHD8-208ENST00000555301 HLA-DMBP28068 263 aa10.57□□□□□ -0.72
CHD8-208ENST00000555301 RANP62826 216 aaKnown RBP10.57□□□□□ -0.72
CHD8-208ENST00000555301 ACTL10Q5JWF8 245 aa10.57□□□□□ -0.72
CHD8-208ENST00000555301 ALKAL2Q6UX46 152 aa10.57□□□□□ -0.72
CHD8-208ENST00000555301 SFT2D1Q8WV19 159 aa10.57□□□□□ -0.72
CHD8-208ENST00000555301 SAV1Q9H4B6 383 aaPredicted RBP10.57□□□□□ -0.72
CHD8-208ENST00000555301 SORL1Q92673 2214 aa10.56□□□□□ -0.72
CHD8-208ENST00000555301 KNCNA6PVL3 124 aa10.56□□□□□ -0.72
CHD8-208ENST00000555301 TEX46H3BTG2 121 aa10.56□□□□□ -0.72
CHD8-208ENST00000555301 FRMD6-AS1P0C7T7 363 aa10.56□□□□□ -0.72
CHD8-208ENST00000555301 HLA-DRB4P13762 266 aa10.56□□□□□ -0.72
CHD8-208ENST00000555301 FGF8P55075 233 aaPredicted RBP10.56□□□□□ -0.72
CHD8-208ENST00000555301 ICAM4Q14773 271 aa10.56□□□□□ -0.72
CHD8-208ENST00000555301 FAM74A1Q5RGS3 127 aa10.56□□□□□ -0.72
CHD8-208ENST00000555301 EXOC3-AS1Q8N2X6 119 aa10.56□□□□□ -0.72
CHD8-208ENST00000555301 RPUSD4Q96CM3 377 aaKnown RBP10.56□□□□□ -0.72
CHD8-208ENST00000555301 Q9H3A6 140 aa10.56□□□□□ -0.72
CHD8-208ENST00000555301 HLA-DRB4X5D2U9 266 aa10.56□□□□□ -0.72
CHD8-208ENST00000555301 A0A0J9YX75 114 aa10.55□□□□□ -0.72
CHD8-208ENST00000555301 H3BMM0 161 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms