RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 BUB1B-PAK6H3BSN5 160 aa2.43□□□□□ -2.02
PSEN1-211ENST00000554995 CXCL8P10145 99 aa2.43□□□□□ -2.02
PSEN1-211ENST00000554995 PPIBP23284 216 aaKnown RBP2.43□□□□□ -2.02
PSEN1-211ENST00000554995 PHBP35232 272 aa2.43□□□□□ -2.02
PSEN1-211ENST00000554995 EIF2B2P49770 351 aaKnown RBP2.43□□□□□ -2.02
PSEN1-211ENST00000554995 DEFA3P59666 94 aa2.43□□□□□ -2.02
PSEN1-211ENST00000554995 SUPT4H1P63272 117 aaKnown RBP2.43□□□□□ -2.02
PSEN1-211ENST00000554995 KRTAP6-3Q3LI67 103 aa2.43□□□□□ -2.02
PSEN1-211ENST00000554995 SPANXN3Q5MJ09 141 aa2.43□□□□□ -2.02
PSEN1-211ENST00000554995 FAM27BQ5VT28 67 aa2.43□□□□□ -2.02
PSEN1-211ENST00000554995 KTN1-AS1Q86SY8 53 aa2.43□□□□□ -2.02
PSEN1-211ENST00000554995 LRRC28Q86X40 367 aaPredicted RBP2.43□□□□□ -2.02
PSEN1-211ENST00000554995 TMEM86AQ8N2M4 240 aa2.43□□□□□ -2.02
PSEN1-211ENST00000554995 OR11H6Q8NGC7 330 aa2.43□□□□□ -2.02
PSEN1-211ENST00000554995 GNPDA2Q8TDQ7 276 aa2.43□□□□□ -2.02
PSEN1-211ENST00000554995 MCEEQ96PE7 176 aa2.43□□□□□ -2.02
PSEN1-211ENST00000554995 OBSL1O75147 1896 aa2.43□□□□□ -2.02
PSEN1-211ENST00000554995 ZNF106Q9H2Y7 1883 aaKnown RBP2.43□□□□□ -2.02
PSEN1-211ENST00000554995 PLXNA4Q9HCM2 1894 aa2.43□□□□□ -2.02
PSEN1-211ENST00000554995 NYNRINQ9P2P1 1898 aaKnown RBP2.43□□□□□ -2.02
PSEN1-211ENST00000554995 DOPEY1Q5JWR5 2465 aa2.43□□□□□ -2.02
PSEN1-211ENST00000554995 HELZP42694 1942 aaKnown RBP2.42□□□□□ -2.02
PSEN1-211ENST00000554995 EP300Q09472 2414 aaPredicted RBP2.42□□□□□ -2.02
PSEN1-211ENST00000554995 DSPP15924 2871 aaKnown RBP2.42□□□□□ -2.02
PSEN1-211ENST00000554995 IGLV3-9A0A075B6K5 115 aa2.42□□□□□ -2.02
PSEN1-211ENST00000554995 A0A0D9SEW6 157 aa2.42□□□□□ -2.02
PSEN1-211ENST00000554995 SMIM17P0DL12 118 aa2.42□□□□□ -2.02
PSEN1-211ENST00000554995 KDELR1P24390 212 aa2.42□□□□□ -2.02
PSEN1-211ENST00000554995 SDC4P31431 198 aa2.42□□□□□ -2.02
PSEN1-211ENST00000554995 G6PCP35575 357 aa2.42□□□□□ -2.02
PSEN1-211ENST00000554995 SERPINB9P50453 376 aa2.42□□□□□ -2.02
PSEN1-211ENST00000554995 ZNF80P51504 273 aaPredicted RBP2.42□□□□□ -2.02
PSEN1-211ENST00000554995 SARNPP82979 210 aaKnown RBP2.42□□□□□ -2.02
PSEN1-211ENST00000554995 BPIFA4PQ86YQ2 179 aa2.42□□□□□ -2.02
PSEN1-211ENST00000554995 SLC25A40Q8TBP6 338 aa2.42□□□□□ -2.02
PSEN1-211ENST00000554995 C1orf54Q8WWF1 131 aa2.42□□□□□ -2.02
PSEN1-211ENST00000554995 DOHHQ9BU89 302 aa2.42□□□□□ -2.02
PSEN1-211ENST00000554995 CEP250Q9BV73 2442 aa2.42□□□□□ -2.02
PSEN1-211ENST00000554995 TEX15Q9BXT5 2789 aa2.42□□□□□ -2.02
PSEN1-211ENST00000554995 PLXNB1O43157 2135 aa2.41□□□□□ -2.02
PSEN1-211ENST00000554995 DOCK6Q96HP0 2047 aa2.41□□□□□ -2.02
PSEN1-211ENST00000554995 ABCA12Q86UK0 2595 aa2.41□□□□□ -2.02
PSEN1-211ENST00000554995 MYO18BQ8IUG5 2567 aa2.41□□□□□ -2.02
PSEN1-211ENST00000554995 TRBV10-2A0A0K0K1G8 114 aa2.41□□□□□ -2.02
PSEN1-211ENST00000554995 HMSDA8MTL9 139 aa2.41□□□□□ -2.02
PSEN1-211ENST00000554995 ZNF705FA8MVS1 300 aaPredicted RBP2.41□□□□□ -2.02
PSEN1-211ENST00000554995 CST8O60676 142 aa2.41□□□□□ -2.02
PSEN1-211ENST00000554995 PGLYRP1O75594 196 aaPredicted RBP2.41□□□□□ -2.02
PSEN1-211ENST00000554995 OR2J2O76002 312 aa2.41□□□□□ -2.02
PSEN1-211ENST00000554995 SHBGP04278 402 aa2.41□□□□□ -2.02
PSEN1-211ENST00000554995 NFYAP23511 347 aaPredicted RBP2.41□□□□□ -2.02
PSEN1-211ENST00000554995 RPL22P35268 128 aaKnown RBP2.41□□□□□ -2.02
PSEN1-211ENST00000554995 SLC38A11Q08AI6 406 aa2.41□□□□□ -2.02
PSEN1-211ENST00000554995 SLC36A1Q7Z2H8 476 aa2.41□□□□□ -2.02
PSEN1-211ENST00000554995 TERB2Q8NHR7 220 aa2.41□□□□□ -2.02
PSEN1-211ENST00000554995 CENPHQ9H3R5 247 aa2.41□□□□□ -2.02
PSEN1-211ENST00000554995 PARVBQ9HBI1 364 aa2.41□□□□□ -2.02
PSEN1-211ENST00000554995 SAR1AQ9NR31 198 aa2.41□□□□□ -2.02
PSEN1-211ENST00000554995 COL4A2P08572 1712 aa2.41□□□□□ -2.02
PSEN1-211ENST00000554995 ITPR1Q14643 2758 aa2.4□□□□□ -2.02
PSEN1-211ENST00000554995 OR51F1A6NGY5 319 aa2.4□□□□□ -2.03
PSEN1-211ENST00000554995 TMEM238C9JI98 176 aa2.4□□□□□ -2.03
PSEN1-211ENST00000554995 KALRNO60229 2985 aa2.4□□□□□ -2.03
PSEN1-211ENST00000554995 EDF1O60869 148 aaKnown RBP2.4□□□□□ -2.03
PSEN1-211ENST00000554995 OR5F1O95221 314 aa2.4□□□□□ -2.03
PSEN1-211ENST00000554995 G0S2P27469 103 aa2.4□□□□□ -2.03
PSEN1-211ENST00000554995 ERP29P30040 261 aaKnown RBP2.4□□□□□ -2.03
PSEN1-211ENST00000554995 CDC42P60953 191 aa2.4□□□□□ -2.03
PSEN1-211ENST00000554995 RPL19P84098 196 aaKnown RBP2.4□□□□□ -2.03
PSEN1-211ENST00000554995 KRR1Q13601 381 aaKnown RBP2.4□□□□□ -2.03
PSEN1-211ENST00000554995 BRMS1LQ5PSV4 323 aa2.4□□□□□ -2.03
PSEN1-211ENST00000554995 Q6Q795 121 aa2.4□□□□□ -2.03
PSEN1-211ENST00000554995 CLVS1Q8IUQ0 354 aaPredicted RBP2.4□□□□□ -2.03
PSEN1-211ENST00000554995 C12orf29Q8N999 325 aa2.4□□□□□ -2.03
PSEN1-211ENST00000554995 TET1Q8NFU7 2136 aa2.4□□□□□ -2.03
PSEN1-211ENST00000554995 FAM172AQ8WUF8 416 aa2.4□□□□□ -2.03
PSEN1-211ENST00000554995 DYDC1Q8WWB3 177 aa2.4□□□□□ -2.03
PSEN1-211ENST00000554995 DNAJC9Q8WXX5 260 aa2.4□□□□□ -2.03
PSEN1-211ENST00000554995 SELENOSQ9BQE4 189 aa2.4□□□□□ -2.03
PSEN1-211ENST00000554995 SNRNP25Q9BV90 132 aaKnown RBP2.4□□□□□ -2.03
PSEN1-211ENST00000554995 TRABDQ9H4I3 376 aa2.4□□□□□ -2.03
PSEN1-211ENST00000554995 SLC39A9Q9NUM3 307 aa2.4□□□□□ -2.03
PSEN1-211ENST00000554995 ITPR3Q14573 2671 aa2.4□□□□□ -2.03
PSEN1-211ENST00000554995 SMG1Q96Q15 3661 aaKnown RBP2.4□□□□□ -2.03
PSEN1-211ENST00000554995 BRWD1Q9NSI6 2320 aa2.4□□□□□ -2.03
PSEN1-211ENST00000554995 HECTD1Q9ULT8 2610 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 PRRC2CQ9Y520 2896 aaKnown RBP2.39□□□□□ -2.03
PSEN1-211ENST00000554995 FAM92AA1XBS5 289 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 ARL5CA6NH57 179 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 TRGC1P0CF51 173 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 GNG10P50151 68 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 FXYD2P54710 66 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 AQP4P55087 323 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 HSPE1P61604 102 aaKnown RBP2.39□□□□□ -2.03
PSEN1-211ENST00000554995 RELAQ04206 551 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 NCBP2-AS2Q69YL0 99 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 C3orf62Q6ZUJ4 267 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 GOLT1AQ6ZVE7 132 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 OR52R1Q8NGF1 315 aa2.39□□□□□ -2.03
PSEN1-211ENST00000554995 PFN4Q8NHR9 129 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms