RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 MUC21A0A140T8X8 626 aa12.34□□□□□ -0.43
ARHGEF40-203ENST00000554514 ARMS2P0C7Q2 107 aa12.34□□□□□ -0.43
ARHGEF40-203ENST00000554514 C5orf64Q2M2E5 130 aa12.34□□□□□ -0.43
ARHGEF40-203ENST00000554514 MUC21Q5SSG8 566 aa12.34□□□□□ -0.43
ARHGEF40-203ENST00000554514 SIGLEC15Q6ZMC9 328 aa12.34□□□□□ -0.43
ARHGEF40-203ENST00000554514 C8orf49Q96NF6 230 aa12.34□□□□□ -0.43
ARHGEF40-203ENST00000554514 RNF5Q99942 180 aa12.34□□□□□ -0.43
ARHGEF40-203ENST00000554514 TP73-AS1Q9UF72 201 aa12.34□□□□□ -0.43
ARHGEF40-203ENST00000554514 PSG8Q9UQ74 426 aa12.34□□□□□ -0.43
ARHGEF40-203ENST00000554514 OR2T8A6NH00 312 aa12.34□□□□□ -0.43
ARHGEF40-203ENST00000554514 PAX2Q02962 417 aa12.34□□□□□ -0.43
ARHGEF40-203ENST00000554514 CT83Q5H943 113 aa12.34□□□□□ -0.43
ARHGEF40-203ENST00000554514 IGFL4Q6B9Z1 124 aa12.34□□□□□ -0.43
ARHGEF40-203ENST00000554514 VMO1Q7Z5L0 202 aa12.34□□□□□ -0.43
ARHGEF40-203ENST00000554514 OR11H6Q8NGC7 330 aa12.34□□□□□ -0.43
ARHGEF40-203ENST00000554514 LPAR2Q9HBW0 351 aa12.34□□□□□ -0.43
ARHGEF40-203ENST00000554514 ZNF785A8K8V0 405 aa12.33□□□□□ -0.44
ARHGEF40-203ENST00000554514 ARPC1AQ92747 370 aa12.33□□□□□ -0.44
ARHGEF40-203ENST00000554514 IGHV1-24A0A0C4DH33 117 aa12.33□□□□□ -0.44
ARHGEF40-203ENST00000554514 C2orf70A6NJV1 201 aa12.33□□□□□ -0.44
ARHGEF40-203ENST00000554514 FANCD2OSQ96PS1 177 aa12.33□□□□□ -0.44
ARHGEF40-203ENST00000554514 GOLT1BQ9Y3E0 138 aa12.33□□□□□ -0.44
ARHGEF40-203ENST00000554514 CHD8Q9HCK8 2581 aa12.32□□□□□ -0.44
ARHGEF40-203ENST00000554514 NCOR2Q9Y618 2525 aa12.32□□□□□ -0.44
ARHGEF40-203ENST00000554514 LOC102724200A0A096LPH7 203 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF40-203ENST00000554514 K7EQM0 130 aa12.32□□□□□ -0.44
ARHGEF40-203ENST00000554514 ZNF414Q96IQ9 312 aa12.32□□□□□ -0.44
ARHGEF40-203ENST00000554514 FBXL19-AS1Q494R0 122 aa12.32□□□□□ -0.44
ARHGEF40-203ENST00000554514 TMEM208Q9BTX3 173 aa12.32□□□□□ -0.44
ARHGEF40-203ENST00000554514 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 NDUFB8O95169 186 aa12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 PRTN3P24158 256 aa12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 HINT1P49773 126 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 MFAP4P55083 255 aa12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 PSG3Q16557 428 aa12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 GFRA4Q9GZZ7 299 aa12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 NPIPB6E9PJ23 425 aa12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 ZFP36P26651 326 aaKnown RBP12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 CRIP1P50238 77 aa12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 KLHDC1Q8N7A1 406 aa12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 TMEM70Q9BUB7 260 aa12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 ZFHX3Q15911 3703 aa12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 IGKV2-40A0A087WW87 121 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 NDUFA3O95167 84 aa12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 LEPROTL1O95214 131 aa12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 IGKV2D-40P01614 121 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 LINC00614P0C842 121 aa12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 IGLL1P15814 213 aa12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 NPBQ8NG41 125 aa12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 AAMDCQ9H7C9 122 aa12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 SOX21Q9Y651 276 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF40-203ENST00000554514 A0A1B0GUT8 65 aa12.3□□□□□ -0.44
ARHGEF40-203ENST00000554514 SERTM2A0A1B0GWG4 89 aa12.3□□□□□ -0.44
ARHGEF40-203ENST00000554514 ODF3BA8MYP8 253 aa12.3□□□□□ -0.44
ARHGEF40-203ENST00000554514 STPG4Q8N801 248 aa12.3□□□□□ -0.44
ARHGEF40-203ENST00000554514 TMEM75Q8N9X5 138 aa12.3□□□□□ -0.44
ARHGEF40-203ENST00000554514 PMCHL2Q9BQD1 86 aa12.3□□□□□ -0.44
ARHGEF40-203ENST00000554514 SRSF8Q9BRL6 282 aaKnown RBP12.3□□□□□ -0.44
ARHGEF40-203ENST00000554514 C21orf62Q9NYP8 219 aa12.3□□□□□ -0.44
ARHGEF40-203ENST00000554514 NPSP0C0P6 89 aa12.3□□□□□ -0.44
ARHGEF40-203ENST00000554514 KLRB1Q12918 225 aa12.3□□□□□ -0.44
ARHGEF40-203ENST00000554514 FAM120AOSQ5T036 256 aa12.3□□□□□ -0.44
ARHGEF40-203ENST00000554514 IGLV11-55A0A075B6I3 123 aa12.29□□□□□ -0.44
ARHGEF40-203ENST00000554514 TRAV9-2A0A087WT02 112 aa12.29□□□□□ -0.44
ARHGEF40-203ENST00000554514 WI2-2373I1.2A0A1W2PRP0 233 aa12.29□□□□□ -0.44
ARHGEF40-203ENST00000554514 TMUB1Q9BVT8 246 aa12.29□□□□□ -0.44
ARHGEF40-203ENST00000554514 LAMTOR2Q9Y2Q5 125 aa12.29□□□□□ -0.44
ARHGEF40-203ENST00000554514 CHTOPQ9Y3Y2 248 aaKnown RBP12.29□□□□□ -0.44
ARHGEF40-203ENST00000554514 SPTAN1Q13813 2472 aaKnown RBP12.29□□□□□ -0.44
ARHGEF40-203ENST00000554514 OR4C46A6NHA9 309 aa12.29□□□□□ -0.44
ARHGEF40-203ENST00000554514 M0R1W7 72 aa12.29□□□□□ -0.44
ARHGEF40-203ENST00000554514 HAX1O00165 279 aa12.29□□□□□ -0.44
ARHGEF40-203ENST00000554514 MRPS12O15235 138 aaKnown RBP12.29□□□□□ -0.44
ARHGEF40-203ENST00000554514 APOHP02749 345 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF40-203ENST00000554514 CT45A10P0DMU9 189 aa12.29□□□□□ -0.44
ARHGEF40-203ENST00000554514 HOXB4P17483 251 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF40-203ENST00000554514 COL5A1-AS1Q5SY13 56 aa12.29□□□□□ -0.44
ARHGEF40-203ENST00000554514 ZNF562Q6V9R5 426 aa12.29□□□□□ -0.44
ARHGEF40-203ENST00000554514 Q8TAT8 98 aa12.29□□□□□ -0.44
ARHGEF40-203ENST00000554514 hDV102S1A0JD36 115 aa12.28□□□□□ -0.44
ARHGEF40-203ENST00000554514 F8W735 103 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF40-203ENST00000554514 HLA-DMBP28068 263 aa12.28□□□□□ -0.44
ARHGEF40-203ENST00000554514 Q6ZVH6 145 aa12.28□□□□□ -0.44
ARHGEF40-203ENST00000554514 ZFP30Q9Y2G7 519 aa12.28□□□□□ -0.44
ARHGEF40-203ENST00000554514 MSRB2Q9Y3D2 182 aa12.28□□□□□ -0.44
ARHGEF40-203ENST00000554514 A0A1W2PPR1 153 aa12.28□□□□□ -0.44
ARHGEF40-203ENST00000554514 TSPOP30536 169 aa12.28□□□□□ -0.44
ARHGEF40-203ENST00000554514 ECSCRQ19T08 205 aa12.28□□□□□ -0.44
ARHGEF40-203ENST00000554514 C11orf71Q6IPW1 123 aa12.28□□□□□ -0.44
ARHGEF40-203ENST00000554514 RNF24Q9Y225 148 aa12.28□□□□□ -0.44
ARHGEF40-203ENST00000554514 HIVEP3Q5T1R4 2406 aa12.28□□□□□ -0.44
ARHGEF40-203ENST00000554514 CSN1S1P47710 185 aa12.27□□□□□ -0.44
ARHGEF40-203ENST00000554514 CFAP161Q6P656 301 aa12.27□□□□□ -0.44
ARHGEF40-203ENST00000554514 C1RLQ9NZP8 487 aa12.27□□□□□ -0.44
ARHGEF40-203ENST00000554514 LOC389332A0A1B0GUA5 103 aa12.27□□□□□ -0.45
ARHGEF40-203ENST00000554514 RIGQ13278 110 aa12.27□□□□□ -0.45
ARHGEF40-203ENST00000554514 UBTD1Q9HAC8 227 aa12.27□□□□□ -0.45
ARHGEF40-203ENST00000554514 TRAV30A0A087WSZ9 112 aa12.27□□□□□ -0.45
ARHGEF40-203ENST00000554514 IGHV3-66A0A0C4DH42 116 aa12.27□□□□□ -0.45
ARHGEF40-203ENST00000554514 FAM231BA6NCW3 169 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms