RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 WT1P19544 449 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-207ENST00000554439 GPR183P32249 361 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 MYCNOSP40205 109 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 KIR2DS2P43631 304 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 PRB3Q04118 309 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-207ENST00000554439 HCP5Q6MZN7 132 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 Q6ZT83 130 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 SMIM15Q7Z3B0 74 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 PDPNQ86YL7 162 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 C9orf106Q8NAJ2 232 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 MDS2Q8NDY4 140 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 RAB37Q96AX2 223 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 FLYWCH2Q96CP2 140 aaKnown RBP2.03□□□□□ -2.08
PRPF39-207ENST00000554439 RITA1Q96K30 269 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 HARBI1Q96MB7 349 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 CCL13Q99616 98 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 TPPP3Q9BW30 176 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 MAP1LC3CQ9BXW4 147 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 MRPL20Q9BYC9 149 aaKnown RBP2.03□□□□□ -2.08
PRPF39-207ENST00000554439 RPP21Q9H633 154 aaKnown RBP2.03□□□□□ -2.08
PRPF39-207ENST00000554439 NDUFA4L2Q9NRX3 87 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 LOC389332A0A1B0GUA5 103 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 A0A1W2PRD5 423 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 A0A1W2PRF3 423 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 A0A1W2PRM7 423 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 hADV38S2A0JD32 116 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 C19orf71A6NCJ1 209 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 KLRC4-KLRK1H3BQV0 150 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 H3BUT2 72 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 K7EMI3 77 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 CHEK1O14757 476 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 CD5LO43866 347 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 APOHP02749 345 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-207ENST00000554439 ARMS2P0C7Q2 107 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 NHLRC4P0CG21 123 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-207ENST00000554439 COX8AP10176 69 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 HTR1DP28221 377 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 DLX1P56177 255 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 HIST1H1AQ02539 215 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-207ENST00000554439 FAM71F2Q6NXP2 309 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 C12orf54Q6X4T0 127 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 ATP5L2Q7Z4Y8 100 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 ZCCHC24Q8N2G6 241 aaKnown RBP2.03□□□□□ -2.08
PRPF39-207ENST00000554439 EXOC3-AS1Q8N2X6 119 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 RBMXL3Q8N7X1 1067 aaKnown RBP2.03□□□□□ -2.08
PRPF39-207ENST00000554439 FER1L6-AS1Q8NA97 138 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 OR8A1Q8NGG7 326 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 OR1L8Q8NGR8 309 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 H1FXQ92522 213 aaKnown RBP2.03□□□□□ -2.08
PRPF39-207ENST00000554439 CHCHD1Q96BP2 118 aaKnown RBP2.03□□□□□ -2.08
PRPF39-207ENST00000554439 DAZAP1Q96EP5 407 aaKnown RBP2.03□□□□□ -2.08
PRPF39-207ENST00000554439 ZNF714Q96N38 554 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 GPR82Q96P67 336 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 PIMREGQ9BSJ6 248 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 MRPL32Q9BYC8 188 aaKnown RBP2.03□□□□□ -2.08
PRPF39-207ENST00000554439 SPRY4Q9C004 299 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 PRSS22Q9GZN4 317 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 TMEM191AQ9H0A3 160 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 RABAC1Q9UI14 185 aa2.03□□□□□ -2.08
PRPF39-207ENST00000554439 A0A096LNJ9 63 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 IGHV3-72A0A0B4J1Y9 119 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 TCRBV4S1A1TA0A5B7 111 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 A8MWL6 223 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 K7ERU9 68 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 VCYO14598 125 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 ZNF207O43670 478 aaKnown RBP2.02□□□□□ -2.09
PRPF39-207ENST00000554439 LHBP01229 141 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 LTAP01374 205 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 HLA-DRB1P01911 266 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 LIPFP07098 398 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 OR5AL1P0C617 328 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 NBEAP1P0C6P0 100 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 FGF6P10767 208 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 CCL3L1P16619 93 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 CFHR2P36980 270 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 IFI27P40305 119 aaPredicted RBP2.02□□□□□ -2.09
PRPF39-207ENST00000554439 SRSF6Q13247 344 aaKnown RBP2.02□□□□□ -2.09
PRPF39-207ENST00000554439 GUSBP1Q15486 140 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 POU2AF1Q16633 256 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 RTL8BQ17RB0 113 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 TMEM97Q5BJF2 176 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 LINC01545Q5VT33 79 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 UFSP1Q6NVU6 142 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 CLEC2AQ6UVW9 174 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 SLC25A48Q6ZT89 311 aaKnown RBP2.02□□□□□ -2.09
PRPF39-207ENST00000554439 PRNTQ86SH4 94 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 BPIFA4PQ86YQ2 179 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 C5orf17Q8NAS9 161 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 RNF183Q96D59 192 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 C17orf77Q96MU5 243 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 C19orf24Q9BVV8 132 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 Q9H3A6 140 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 ZNF430Q9H8G1 570 aaPredicted RBP2.02□□□□□ -2.09
PRPF39-207ENST00000554439 C1RLQ9NZP8 487 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 PEF1Q9UBV8 284 aaKnown RBP2.02□□□□□ -2.09
PRPF39-207ENST00000554439 F11RQ9Y624 299 aaKnown RBP2.02□□□□□ -2.09
PRPF39-207ENST00000554439 MALRD1Q5VYJ5 2156 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.02□□□□□ -2.09
PRPF39-207ENST00000554439 A0A1W2PPI3 338 aa2.02□□□□□ -2.09
PRPF39-207ENST00000554439 G3V4G9 280 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms