RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 FAM236AA0A1B0GUQ0 79 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 FAM236BA0A1B0GV22 79 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 C20orf202A1L168 122 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 CORTO00230 105 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 HBDP02042 147 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 CLPSP04118 112 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 SHBGP04278 402 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 APODP05090 189 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 TRGC1P0CF51 173 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 TPT1P13693 172 aaKnown RBP2.49□□□□□ -2.01
SCFD1-211ENST00000554437 RBP2P50120 134 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 CDK5R1Q15078 307 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 IGFBP7Q16270 282 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 Q6ZQT0 140 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 PKMYT1Q99640 499 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 NAA38Q9BRA0 125 aaKnown RBP2.49□□□□□ -2.01
SCFD1-211ENST00000554437 COA4Q9NYJ1 87 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 COMMD3Q9UBI1 195 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 FAM135BQ49AJ0 1406 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 SYNJ1O43426 1573 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 TMEM2Q9UHN6 1383 aa2.49□□□□□ -2.01
SCFD1-211ENST00000554437 DLC1Q96QB1 1528 aa2.48□□□□□ -2.01
SCFD1-211ENST00000554437 GRIN2AQ12879 1464 aa2.48□□□□□ -2.01
SCFD1-211ENST00000554437 SPEF2Q9C093 1822 aa2.48□□□□□ -2.01
SCFD1-211ENST00000554437 A0A1B0GVG6 124 aa2.48□□□□□ -2.01
SCFD1-211ENST00000554437 BBIP1A8MTZ0 92 aa2.48□□□□□ -2.01
SCFD1-211ENST00000554437 PLGLB1Q02325 96 aa2.48□□□□□ -2.01
SCFD1-211ENST00000554437 ESRGQ1W209 222 aa2.48□□□□□ -2.01
SCFD1-211ENST00000554437 TMEM91Q6ZNR0 172 aa2.48□□□□□ -2.01
SCFD1-211ENST00000554437 TEN1Q86WV5 123 aa2.48□□□□□ -2.01
SCFD1-211ENST00000554437 RPS19BP1Q86WX3 136 aaKnown RBP2.48□□□□□ -2.01
SCFD1-211ENST00000554437 RETNLBQ9BQ08 111 aa2.48□□□□□ -2.01
SCFD1-211ENST00000554437 PSMG3Q9BT73 122 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-211ENST00000554437 TAS2R4Q9NYW5 299 aa2.48□□□□□ -2.01
SCFD1-211ENST00000554437 CCDC167Q9P0B6 97 aa2.48□□□□□ -2.01
SCFD1-211ENST00000554437 ZNF638Q14966 1978 aaKnown RBP2.48□□□□□ -2.01
SCFD1-211ENST00000554437 KDM6AO15550 1401 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-211ENST00000554437 ARHGEF28Q8N1W1 1705 aaKnown RBP2.48□□□□□ -2.01
SCFD1-211ENST00000554437 NUP210LQ5VU65 1888 aa2.48□□□□□ -2.01
SCFD1-211ENST00000554437 IGKV3D-11A0A0A0MRZ8 115 aa2.47□□□□□ -2.01
SCFD1-211ENST00000554437 OR51F1A6NGY5 319 aa2.47□□□□□ -2.01
SCFD1-211ENST00000554437 CDC42EP2O14613 210 aa2.47□□□□□ -2.01
SCFD1-211ENST00000554437 LYRM1O43325 122 aa2.47□□□□□ -2.01
SCFD1-211ENST00000554437 S100A8P05109 93 aa2.47□□□□□ -2.01
SCFD1-211ENST00000554437 CTSDP07339 412 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-211ENST00000554437 FABP4P15090 132 aa2.47□□□□□ -2.01
SCFD1-211ENST00000554437 HIST1H1BP16401 226 aaKnown RBP2.47□□□□□ -2.01
SCFD1-211ENST00000554437 SNRPD3P62318 126 aaKnown RBP2.47□□□□□ -2.01
SCFD1-211ENST00000554437 NNATQ16517 81 aa2.47□□□□□ -2.01
SCFD1-211ENST00000554437 ZNF181Q2M3W8 571 aa2.47□□□□□ -2.01
SCFD1-211ENST00000554437 IZUMO2Q6UXV1 221 aa2.47□□□□□ -2.01
SCFD1-211ENST00000554437 BRD3OSQ6XYD6 125 aa2.47□□□□□ -2.01
SCFD1-211ENST00000554437 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-211ENST00000554437 OR5D14Q8NGL3 314 aa2.47□□□□□ -2.01
SCFD1-211ENST00000554437 PPP3R2Q96LZ3 170 aa2.47□□□□□ -2.01
SCFD1-211ENST00000554437 SDF2Q99470 211 aa2.47□□□□□ -2.01
SCFD1-211ENST00000554437 LY96Q9Y6Y9 160 aa2.47□□□□□ -2.01
SCFD1-211ENST00000554437 NAIPQ13075 1403 aa2.47□□□□□ -2.01
SCFD1-211ENST00000554437 SCN4AP35499 1836 aa2.47□□□□□ -2.01
SCFD1-211ENST00000554437 HIVEP2P31629 2446 aa2.47□□□□□ -2.01
SCFD1-211ENST00000554437 NALCNQ8IZF0 1738 aa2.46□□□□□ -2.02
SCFD1-211ENST00000554437 ARHGAP31Q2M1Z3 1444 aa2.46□□□□□ -2.02
SCFD1-211ENST00000554437 CNTLNQ9NXG0 1405 aa2.46□□□□□ -2.02
SCFD1-211ENST00000554437 A0A0G2JMM0 328 aa2.46□□□□□ -2.02
SCFD1-211ENST00000554437 A0A1W2PPB8 328 aa2.46□□□□□ -2.02
SCFD1-211ENST00000554437 KIR3DP1A8MWS1 328 aa2.46□□□□□ -2.02
SCFD1-211ENST00000554437 OR1I1O60431 355 aa2.46□□□□□ -2.02
SCFD1-211ENST00000554437 FGF7P21781 194 aa2.46□□□□□ -2.02
SCFD1-211ENST00000554437 ZNF90Q03938 601 aa2.46□□□□□ -2.02
SCFD1-211ENST00000554437 PYDC2Q56P42 97 aa2.46□□□□□ -2.02
SCFD1-211ENST00000554437 LINC00311Q8N616 119 aa2.46□□□□□ -2.02
SCFD1-211ENST00000554437 OR4C12Q96R67 309 aa2.46□□□□□ -2.02
SCFD1-211ENST00000554437 SCN3BQ9NY72 215 aa2.46□□□□□ -2.02
SCFD1-211ENST00000554437 TPRKBQ9Y3C4 175 aa2.46□□□□□ -2.02
SCFD1-211ENST00000554437 MYH11P35749 1972 aa2.46□□□□□ -2.02
SCFD1-211ENST00000554437 TRPM1Q7Z4N2 1603 aa2.46□□□□□ -2.02
SCFD1-211ENST00000554437 SCAF11Q99590 1463 aaKnown RBP2.45□□□□□ -2.02
SCFD1-211ENST00000554437 FER1L6Q2WGJ9 1857 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 KIAA1107Q9UPP5 1409 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 TRAV3A0A0B4J244 114 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 LOC100130705A0A1B0GUX0 176 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 LOC107986453A0A1B0GWG9 222 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 HMSDA8MTL9 139 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 C17orf112F2Z3M2 114 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 G3V3Q6 166 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 PMP2P02689 132 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 AKAIN1P0CW23 69 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 SAA1P0DJI8 122 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-211ENST00000554437 MGST1P10620 155 aaKnown RBP2.45□□□□□ -2.02
SCFD1-211ENST00000554437 HRES1P13985 223 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 TMEM258P61165 79 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 BLCAPP62952 87 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 MEIG1Q5JSS6 88 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 SPANXN5Q5MJ07 72 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 SCIMPQ6UWF3 145 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 Q8IYB0 196 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 LINC00471Q8N535 108 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 POP5Q969H6 163 aaKnown RBP2.45□□□□□ -2.02
SCFD1-211ENST00000554437 FKBP11Q9NYL4 201 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 PSORS1C2Q9UIG4 136 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms