RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 A0A1B0GW64 132 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 RNF222A6NCQ9 220 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 FAM223BA6NKX1 122 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 FOXI3A8MTJ6 420 aaPredicted RBP1.89□□□□□ -2.11
PRPF39-205ENST00000554081 ADARB2-AS1A8MUL3 147 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 ZNF705FA8MVS1 300 aaPredicted RBP1.89□□□□□ -2.11
PRPF39-205ENST00000554081 M0QXV9 152 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 UCP3P55916 312 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 FAM3BP58499 235 aaPredicted RBP1.89□□□□□ -2.11
PRPF39-205ENST00000554081 MIC13Q5XKP0 118 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 PRR27Q6MZM9 219 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 MRPL52Q86TS9 123 aaKnown RBP1.89□□□□□ -2.11
PRPF39-205ENST00000554081 NOXA1Q86UR1 476 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 FAM223AQ8IWN6 122 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 Q8N1Y9 231 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.89□□□□□ -2.11
PRPF39-205ENST00000554081 STOML3Q8TAV4 291 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 FANCD2OSQ96PS1 177 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 B9D2Q9BPU9 175 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 SCRT1Q9BWW7 348 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 GGTLC1Q9BX51 225 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 MS4A6AQ9H2W1 248 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 Q9HAA7 133 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 DEFB131BA0A096LNP1 70 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 TRGV1A0A0A0MS02 117 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 IGHV3-16A0A0C4DH30 117 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 C15orf61A6NNL5 157 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 PMS2P5A8MQ11 134 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 USP17L23D6RBM5 183 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 INMT-MINDY4F8WBC2 141 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 M0R3E3 92 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 LYRM1O43325 122 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 TSPAN13O95857 204 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 IGKV1-5P01602 117 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 HBE1P02100 147 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 GPX1P07203 203 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 EGR2P11161 476 aaPredicted RBP1.89□□□□□ -2.11
PRPF39-205ENST00000554081 SLC25A6P12236 298 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 FGF7P21781 194 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 FUSP35637 526 aaKnown RBP eCLIP1.89□□□□□ -2.11
PRPF39-205ENST00000554081 DYNLT3P51808 116 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 POU2AF1Q16633 256 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 TMEM30BQ3MIR4 351 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 FAM74A4Q5TZK3 123 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 PRSS54Q6PEW0 395 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 SIGLEC15Q6ZMC9 328 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 MTURNQ8N3F0 131 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 C12orf45Q8N5I9 185 aaPredicted RBP1.89□□□□□ -2.11
PRPF39-205ENST00000554081 SMIM12Q96EX1 92 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 ZNF486Q96H40 463 aaPredicted RBP1.89□□□□□ -2.11
PRPF39-205ENST00000554081 C14orf144Q96I85 54 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 C5orf66Q9H5L9 145 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 MRPL36Q9P0J6 103 aaKnown RBP1.89□□□□□ -2.11
PRPF39-205ENST00000554081 MRPL27Q9P0M9 148 aaKnown RBP1.89□□□□□ -2.11
PRPF39-205ENST00000554081 RCL1Q9Y2P8 373 aaKnown RBP1.89□□□□□ -2.11
PRPF39-205ENST00000554081 ALG5Q9Y673 324 aa1.89□□□□□ -2.11
PRPF39-205ENST00000554081 TRAV5A0A0B4J249 113 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 IGLC7A0M8Q6 106 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 SNURFLB1AK76 121 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 F5H697 171 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 PSCAO43653 123 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 GSTZ1O43708 216 aaPredicted RBP1.88□□□□□ -2.11
PRPF39-205ENST00000554081 HYPMO75409 117 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 SC5DO75845 299 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 FSTL3O95633 263 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 CSN3P07498 182 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 CTSGP08311 255 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 IL7P13232 177 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 RNASE4P34096 147 aaKnown RBP1.88□□□□□ -2.11
PRPF39-205ENST00000554081 ADMP35318 185 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 PLP1P60201 277 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 NHLH2Q02577 135 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 CTF1Q16619 201 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 TMEM128Q5BJH2 165 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 GCSAMLQ5JQS6 135 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 ZNF343Q6P1L6 599 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 WFDC9Q8NEX5 89 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 NPBQ8NG41 125 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 OR1P1Q8NH06 330 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 SMIM4Q8WVI0 70 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 YIPF6Q96EC8 236 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 SDHCQ99643 169 aaPredicted RBP1.88□□□□□ -2.11
PRPF39-205ENST00000554081 CABLES2Q9BTV7 478 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 KRTAP9-3Q9BYQ3 159 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 TMEM222Q9H0R3 208 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 MIXL1Q9H2W2 232 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 FNDC4Q9H6D8 234 aaPredicted RBP1.88□□□□□ -2.11
PRPF39-205ENST00000554081 BET1LQ9NYM9 111 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 A0A087X0K7 114 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 IGHV7-4-1A0A0J9YVY3 117 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 SIVA1O15304 175 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 EIF4EBP3O60516 100 aaPredicted RBP1.88□□□□□ -2.11
PRPF39-205ENST00000554081 NDUFA3O95167 84 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 TMEM50AO95807 157 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 IGLV1-51P01701 117 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 RBMY1A1P0DJD3 496 aaKnown RBP1.88□□□□□ -2.11
PRPF39-205ENST00000554081 CSN1S1P47710 185 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 HAMPP81172 84 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 RUNX1Q01196 453 aa1.88□□□□□ -2.11
PRPF39-205ENST00000554081 ARL16Q0P5N6 197 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms