RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 DICER1Q9UPY3 1922 aaKnown RBP1.22□□□□□ -2.21
SRP54-204ENST00000553923 OVOS2A0A0J9YW53 1432 aa1.22□□□□□ -2.21
SRP54-204ENST00000553923 DISP2A7MBM2 1401 aa1.22□□□□□ -2.21
SRP54-204ENST00000553923 OVOS2Q6IE36 1432 aa1.22□□□□□ -2.21
SRP54-204ENST00000553923 ANKRD12Q6UB98 2062 aa1.22□□□□□ -2.21
SRP54-204ENST00000553923 SIPA1L1O43166 1804 aa1.22□□□□□ -2.21
SRP54-204ENST00000553923 RTL9Q8NET4 1388 aa1.21□□□□□ -2.21
SRP54-204ENST00000553923 BICRAQ9NZM4 1560 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 OTOFQ9HC10 1997 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 ADGRL1O94910 1474 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 IGLV3-9A0A075B6K5 115 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 TRAV27A0A087WT01 109 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 IGKV2D-26A0A0A0MRZ7 120 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 MUC21A0A0G2JKD1 596 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 MUC21A0A140T8X8 626 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 LOC107986453A0A1B0GWG9 222 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 hDV103S1A0JD37 113 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 MIF4GDA9UHW6 222 aaKnown RBP1.21□□□□□ -2.22
SRP54-204ENST00000553923 ZNF670-ZNF695F2Z2N8 137 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 C17orf112F2Z3M2 114 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 LY6LH3BQJ8 138 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 SNAPC5O75971 98 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 IGF2P01344 180 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 IFNGP01579 166 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 SLC25A4P12235 298 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 HLA-DRB4P13762 266 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 HIST1H1BP16401 226 aaKnown RBP1.21□□□□□ -2.22
SRP54-204ENST00000553923 CKS2P33552 79 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 AKR1D1P51857 326 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 KRTAP12-4P60329 112 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 EMX2Q04743 252 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 C1orf134Q5TEV5 83 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 HAGHLQ6PII5 290 aaPredicted RBP1.21□□□□□ -2.22
SRP54-204ENST00000553923 Q6ZTI0 123 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 OR5AK2Q8NH90 309 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 TMEM254Q8TBM7 123 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 NAT14Q8WUY8 206 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 DIRC1Q969H9 104 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 HYLS1Q96M11 299 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 C12orf57Q99622 126 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 GGACTQ9BVM4 153 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 PSORS1C2Q9UIG4 136 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 SOX21Q9Y651 276 aaPredicted RBP1.21□□□□□ -2.22
SRP54-204ENST00000553923 HLA-DRB4X5D2U9 266 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 PTPRGP23470 1445 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 SYNJ1O43426 1573 aa1.21□□□□□ -2.22
SRP54-204ENST00000553923 DLC1Q96QB1 1528 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 SCAF11Q99590 1463 aaKnown RBP1.2□□□□□ -2.22
SRP54-204ENST00000553923 ZCCHC11Q5TAX3 1644 aaKnown RBP1.2□□□□□ -2.22
SRP54-204ENST00000553923 TRAV14DV4A0A0A6YYC5 116 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 A0A0G2JMM0 328 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 C3orf85A0A1B0GTC6 90 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 A0A1W2PPB8 328 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 ZNF727A8MUV8 499 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 ZNF705FA8MVS1 300 aaPredicted RBP1.2□□□□□ -2.22
SRP54-204ENST00000553923 KIR3DP1A8MWS1 328 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 IBA57-AS1B1ANH7 110 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 B4DSR2 109 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 F6UZH7 168 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 CDC42EP2O14613 210 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 ZNF737O75373 536 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 TRACP01848 142 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 RBP4P02753 201 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 TSPAN19P0C672 248 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 BAALC-AS2P0C853 105 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 QRFPP83859 136 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 DEFB113Q30KQ7 82 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 KRTAP13-2Q52LG2 175 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 IGFL1Q6UW32 110 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 GLIPR1L1Q6UWM5 242 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 IZUMO2Q6UXV1 221 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 ZNF826PQ6ZT77 177 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 GKN2Q86XP6 184 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 C10orf111Q8N326 155 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 LINC00311Q8N616 119 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 Q8N814 137 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 OR4C6Q8NH72 309 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 C20orf166-AS1Q96NR2 134 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 CIB3Q96Q77 187 aaPredicted RBP1.2□□□□□ -2.22
SRP54-204ENST00000553923 Q9BRP9 147 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 TCEAL7Q9BRU2 100 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 PSMG3Q9BT73 122 aaPredicted RBP1.2□□□□□ -2.22
SRP54-204ENST00000553923 TIMM21Q9BVV7 248 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 NUP214P35658 2090 aaPredicted RBP1.2□□□□□ -2.22
SRP54-204ENST00000553923 DSCAML1Q8TD84 2053 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 SHANK3Q9BYB0 1731 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 DSCAMO60469 2012 aa1.2□□□□□ -2.22
SRP54-204ENST00000553923 ECM29Q5VYK3 1845 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 NCAPD3P42695 1498 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 WDR7Q9Y4E6 1490 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 MAST2Q6P0Q8 1798 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 CABIN1Q9Y6J0 2220 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 A0A0G2JQZ4 141 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 TCRBV4S1A1TA0A5B7 111 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 C5orf67F2Z3F1 127 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 IGKV1-17P01599 117 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 IGLV3-19P01714 112 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 CD14P08571 375 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 AKAIN1P0CW23 69 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 SAA1P0DJI8 122 aaPredicted RBP1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms