RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 LINC00313P59037 77 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 RAB5BP61020 215 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 FGF12P61328 243 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 FOXF1Q12946 379 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 DHRS2Q13268 280 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 OR2F1Q13607 317 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 DEFB121Q5J5C9 76 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 ZNF322Q6U7Q0 402 aaPredicted RBP1.63□□□□□ -2.15
SCFD1-210ENST00000553693 C4orf22Q6V702 233 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 C20orf196Q8IYI0 205 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 ZFAND2AQ8N6M9 145 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 CLDN22Q8N7P3 220 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 DEFB108BQ8NET1 73 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 OR1M1Q8NGA1 313 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 ZNF675Q8TD23 568 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 PHB2Q99623 299 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 TM2D3Q9BRN9 247 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 SMDT1Q9H4I9 107 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 DYNLRB1Q9NP97 96 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 IL20Q9NYY1 176 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 RNF11Q9Y3C5 154 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 R4GN34 69 aa1.63□□□□□ -2.15
SCFD1-210ENST00000553693 DNAH3Q8TD57 4116 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 TMED7-TICAM2A0A0A6YYA0 188 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 TGIF2-C20orf24A0A0A6YYL0 155 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 LCE6AA0A183 80 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 LOC102725191A0A1B0GVB3 256 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 MIF4GDA9UHW6 222 aaKnown RBP1.62□□□□□ -2.15
SCFD1-210ENST00000553693 C3orf84H3BNL1 204 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 M0R233 179 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 SULT1B1O43704 296 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 MRPL33O75394 65 aaKnown RBP1.62□□□□□ -2.15
SCFD1-210ENST00000553693 PIAS1O75925 651 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 APOMO95445 188 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 CPSF4O95639 269 aaKnown RBP1.62□□□□□ -2.15
SCFD1-210ENST00000553693 OR5G3P0C626 314 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 IGHV3-30-3P0DP02 117 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 ALOX5APP20292 161 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 RPL27AP46776 148 aaKnown RBP1.62□□□□□ -2.15
SCFD1-210ENST00000553693 REG1BP48304 166 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 TSPEAR-AS2P59090 65 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 TAS2R30P59541 319 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 TAS2R20P59543 309 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 PSPHP78330 225 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 CCL8P80075 99 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 ZNF117Q03924 483 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 AKR1C1Q04828 323 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 PMAIP1Q13794 54 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 GRK1Q15835 563 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 DEFB112Q30KQ8 113 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 SPANXN3Q5MJ09 141 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 GLT8D1Q68CQ7 371 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 SMARCD3Q6STE5 483 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 COMMD6Q7Z4G1 85 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 MSRB3Q8IXL7 192 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 C1orf174Q8IYL3 243 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 SLC22A24Q8N4F4 322 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 DAND5Q8N907 189 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 POP5Q969H6 163 aaKnown RBP1.62□□□□□ -2.15
SCFD1-210ENST00000553693 BORCS7Q96B45 105 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 ROPN1LQ96C74 230 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 GNPNAT1Q96EK6 184 aaPredicted RBP1.62□□□□□ -2.15
SCFD1-210ENST00000553693 CNBD2Q96M20 576 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 SERPINI1Q99574 410 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 CCL13Q99616 98 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 TMEM222Q9H0R3 208 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 GLTPQ9NZD2 209 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 DOK5Q9P104 306 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 OPTCQ9UBM4 332 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 ZNF443Q9Y2A4 671 aaPredicted RBP1.62□□□□□ -2.15
SCFD1-210ENST00000553693 ARHGAP32A7KAX9 2087 aa1.62□□□□□ -2.15
SCFD1-210ENST00000553693 HEATR1Q9H583 2144 aaKnown RBP1.61□□□□□ -2.15
SCFD1-210ENST00000553693 A0A1W2PQD3 144 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 OR11H12B2RN74 326 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 NDUFB2O95178 105 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 CRYZL1O95825 349 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 IGHV1-69P01742 117 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 UCHL1P09936 223 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 P0C880 135 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 ZNF705DP0CH99 300 aaPredicted RBP1.61□□□□□ -2.15
SCFD1-210ENST00000553693 CBR1P16152 277 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 CRHBPP24387 322 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 MAGEA12P43365 314 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 GABRA2P47869 451 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 EVX1P49640 407 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 RAB13P51153 203 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 DAPP51397 102 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 FXYD7P58549 80 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 POLR2GP62487 172 aaKnown RBP eCLIP1.61□□□□□ -2.15
SCFD1-210ENST00000553693 H3F3AP84243 136 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 EDDM3AQ14507 147 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 KRTAP25-1Q3LHN0 102 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 SPRNQ5BIV9 151 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 FAM201AQ5SY85 155 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 C1orf194Q5T5A4 169 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 SDIM1Q6ZPB5 146 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 ADM2Q7Z4H4 148 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 LY6G5BQ8NDX9 201 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 OR10P1Q8NGE3 313 aa1.61□□□□□ -2.15
SCFD1-210ENST00000553693 OR11H2Q8NH07 326 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms