RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 FBN2P35556 2912 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 CELSR2Q9HCU4 2923 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 ITPR2Q14571 2701 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 ZNF320A2RRD8 509 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 PPP5D1E7EU14 171 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 F6UZH7 168 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 I3L521 148 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 TRIAP1O43715 76 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 OR7C2O60412 319 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 NDUFS6O75380 124 aaKnown RBP3.84□□□□□ -1.79
VTI1B-202ENST00000553619 S100A8P05109 93 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 HIST1H1EP10412 219 aaKnown RBP3.84□□□□□ -1.79
VTI1B-202ENST00000553619 RPL7P18124 248 aaKnown RBP3.84□□□□□ -1.79
VTI1B-202ENST00000553619 CRYBB3P26998 211 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 MYCNOSP40205 109 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 GALR1P47211 349 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 PROK1P58294 105 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 GUK1Q16774 197 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 SAPCD1Q5SSQ6 148 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 SUMO4Q6EEV6 95 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 C16orf54Q6UWD8 224 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 PATE2Q6UY27 113 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 NDUFA11Q86Y39 141 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 OR8I2Q8N0Y5 310 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 KLHL30-AS1Q8NEE0 82 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 OR11H1Q8NG94 326 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 OR1N2Q8NGR9 330 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 TMEM37Q8WXS4 190 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 SHANK2-AS3Q9BTD1 123 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 PAXXQ9BUH6 204 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 C20orf24Q9BUV8 137 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 SLC25A39Q9BZJ4 359 aaPredicted RBP3.84□□□□□ -1.79
VTI1B-202ENST00000553619 GPR61Q9BZJ8 451 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 EIF5A2Q9GZV4 153 aaKnown RBP3.84□□□□□ -1.79
VTI1B-202ENST00000553619 SLC25A22Q9H936 323 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 SEPSECSQ9HD40 501 aaKnown RBP3.84□□□□□ -1.79
VTI1B-202ENST00000553619 MANBALQ9NQG1 85 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 TMEM14CQ9P0S9 112 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 DOK5Q9P104 306 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 RFNGQ9Y644 331 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 ARL2-SNX15V9GYD0 113 aa3.84□□□□□ -1.79
VTI1B-202ENST00000553619 SONP18583 2426 aaKnown RBP3.84□□□□□ -1.8
VTI1B-202ENST00000553619 FLNAP21333 2647 aaKnown RBP3.84□□□□□ -1.8
VTI1B-202ENST00000553619 TEX15Q9BXT5 2789 aa3.84□□□□□ -1.8
VTI1B-202ENST00000553619 CRYBG3Q68DQ2 2970 aa3.84□□□□□ -1.8
VTI1B-202ENST00000553619 IGHV3-35A0A0C4DH35 117 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 A0A1W2PRE2 83 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 HELTA6NFD8 242 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 RBFOX3A6NFN3 312 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 ZNF785A8K8V0 405 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 CYSRT1A8MQ03 144 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 F5H697 171 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 H3BRN7 92 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 NBEAP1P0C6P0 100 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 SMIM6P0DI80 62 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 ARL14EPLP0DKL9 152 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 CD28P10747 220 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 GCHFRP30047 84 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 FHITP49789 147 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 PAFAH1B2P68402 229 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 PSG9Q00887 426 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 DEFA5Q01523 94 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 KLF5Q13887 457 aaPredicted RBP3.83□□□□□ -1.8
VTI1B-202ENST00000553619 GCSAMLQ5JQS6 135 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 SAMD13Q5VXD3 122 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 C10orf99Q6UWK7 81 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 LYPD1Q8N2G4 141 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 EIF4E3Q8N5X7 224 aaKnown RBP3.83□□□□□ -1.8
VTI1B-202ENST00000553619 WIPF2Q8TF74 440 aaPredicted RBP3.83□□□□□ -1.8
VTI1B-202ENST00000553619 TMEM158Q8WZ71 300 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 UHRF2Q96PU4 802 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 OR5B12Q96R08 314 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 C12orf57Q99622 126 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 BIN3Q9NQY0 253 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 DAZ1Q9NQZ3 744 aaKnown RBP3.83□□□□□ -1.8
VTI1B-202ENST00000553619 VAX2Q9UIW0 290 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 TLN2Q9Y4G6 2542 aa3.83□□□□□ -1.8
VTI1B-202ENST00000553619 TEP1Q99973 2627 aaKnown RBP3.82□□□□□ -1.8
VTI1B-202ENST00000553619 IGHV4OR15-8A0A075B7B6 117 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 A0A087WW49 117 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 IGHV7-4-1A0A0J9YVY3 117 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 A0A1B0GV50 99 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 CCL24O00175 119 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 TSPAN4O14817 238 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 HMGB3O15347 200 aaKnown RBP3.82□□□□□ -1.8
VTI1B-202ENST00000553619 BUB3O43684 328 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 PDE6DO43924 150 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 TRBV12-3P01733 135 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 HOXD3P31249 432 aaPredicted RBP3.82□□□□□ -1.8
VTI1B-202ENST00000553619 ID1P41134 155 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 CSN1S1P47710 185 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 FGF8P55075 233 aaPredicted RBP3.82□□□□□ -1.8
VTI1B-202ENST00000553619 CMC4P56277 68 aaPredicted RBP3.82□□□□□ -1.8
VTI1B-202ENST00000553619 PDE6HQ13956 83 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 USF2Q15853 346 aaPredicted RBP3.82□□□□□ -1.8
VTI1B-202ENST00000553619 ZNF726P1Q15940 193 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 CST9LP1Q5W188 147 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 C12orf54Q6X4T0 127 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 MIR17HGQ75NE6 70 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 COMMD7Q86VX2 200 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms