RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 SOX21Q9Y651 276 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-221ENST00000553498 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.66□□□□□ -1.5
ATXN3-221ENST00000553498 KRTAP9-7A8MTY7 169 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 G3V318 75 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 NDUFA4O00483 81 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 PHOX2AO14813 284 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 BUB3O43684 328 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 GATCO43716 136 aaKnown RBP5.66□□□□□ -1.5
ATXN3-221ENST00000553498 TRGV3P03979 118 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 MGST1P10620 155 aaKnown RBP5.66□□□□□ -1.5
ATXN3-221ENST00000553498 PLA2G2AP14555 144 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 IER3P46695 156 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 CDX1P47902 265 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-221ENST00000553498 CFHR3Q02985 330 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 FABP9Q0Z7S8 132 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 SAPCD1Q5SSQ6 148 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 SAMD13Q5VXD3 122 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 LEMD1Q68G75 181 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 COX8CQ7Z4L0 72 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 ATP5L2Q7Z4Y8 100 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 OR8I2Q8N0Y5 310 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 Q8N1Y9 231 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 TMEM86BQ8N661 226 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 NRGNQ92686 78 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 MRPL53Q96EL3 112 aaKnown RBP5.66□□□□□ -1.5
ATXN3-221ENST00000553498 VPREB3Q9UKI3 123 aa5.66□□□□□ -1.5
ATXN3-221ENST00000553498 ROS1P08922 2347 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 ACACBO00763 2458 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 A0A1W2PS18 150 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 RBAKDNA6NC62 111 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 ZNF705GA8MUZ8 300 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-221ENST00000553498 A8MWL6 223 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 DIRC3C9JPN6 131 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 IGHG4P01861 327 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 TRGC1P0CF51 173 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 SMIM6P0DI80 62 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 TPPP2P59282 170 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 RPL15P61313 204 aaKnown RBP5.65□□□□□ -1.5
ATXN3-221ENST00000553498 PSG3Q16557 428 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 DEFB112Q30KQ8 113 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 C9orf152Q5JTZ5 239 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 Q6AWC8 147 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 CLEC19AQ6UXS0 136 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 Q6YL49 198 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 Q86TA4 180 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 WIPF2Q8TF74 440 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-221ENST00000553498 TSKUQ8WUA8 353 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 FRZBQ92765 325 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 DAZAP1Q96EP5 407 aaKnown RBP5.65□□□□□ -1.5
ATXN3-221ENST00000553498 PRSS22Q9GZN4 317 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 CDIP1Q9H305 208 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 AURKAIP1Q9NWT8 199 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-221ENST00000553498 NAT8BQ9UHF3 227 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 TRAPPC1Q9Y5R8 145 aa5.65□□□□□ -1.5
ATXN3-221ENST00000553498 USP24Q9UPU5 2620 aa5.65□□□□□ -1.51
ATXN3-221ENST00000553498 C19orf71A6NCJ1 209 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 IZUMO1RA6ND01 250 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 LINC01548A6NM66 108 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 K7EMT4 169 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 P01737 135 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 HLA-DQA1P01909 254 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 HNF1AP20823 631 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 S100A2P29034 98 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 BMI1P35226 326 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 ARL3P36405 182 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 AKR1D1P51857 326 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 GNG5P63218 68 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 SLC35B1P78383 322 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 SCGB2A2Q13296 93 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 OR5I1Q13606 314 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 LY6EQ16553 131 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 GOLT1AQ6ZVE7 132 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 LINC00518Q8N0U6 118 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 CIARTQ8N365 385 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-221ENST00000553498 NUDT10Q8NFP7 164 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 NUDT11Q96G61 164 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 LINC00479Q96M42 142 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 Q96MF0 132 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 MS4A10Q96PG2 267 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 NPFFR1Q9GZQ6 430 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 RNASE7Q9H1E1 156 aaKnown RBP5.64□□□□□ -1.51
ATXN3-221ENST00000553498 RPP21Q9H633 154 aaKnown RBP5.64□□□□□ -1.51
ATXN3-221ENST00000553498 GNB4Q9HAV0 340 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 ZNF331Q9NQX6 463 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-221ENST00000553498 SERTAD4Q9NUC0 356 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 S4R3C0 116 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 PCNX1Q96RV3 2341 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 LRBAP50851 2863 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 HIVEP3Q5T1R4 2406 aa5.64□□□□□ -1.51
ATXN3-221ENST00000553498 COL6A6A6NMZ7 2263 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 ICE1Q9Y2F5 2266 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 TRAV34A0A0B4J273 112 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 A0A1B0GW15 77 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 XKRY2A2RUG3 117 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 CLPSL1A2RUU4 121 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 ZNF785A8K8V0 405 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 SLC17A3O00476 420 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 IGLV2-11P01706 119 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 IGHV3-23P01764 117 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 PLA2G1BP04054 148 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms