RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 GNPNAT1Q96EK6 184 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-219ENST00000553488 MDFICQ9P1T7 246 aa4.97□□□□□ -1.61
ATXN3-219ENST00000553488 HSPB7Q9UBY9 170 aa4.97□□□□□ -1.61
ATXN3-219ENST00000553488 A0A0J9YY99 117 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 ZNF98A6NK75 572 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 H3BNG1 76 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 DUSP14O95147 198 aaKnown RBP4.96□□□□□ -1.62
ATXN3-219ENST00000553488 DNAH10OSP0CZ25 163 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 TBPP20226 339 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 M6PRP20645 277 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 GALR1P47211 349 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 TAS2R60P59551 318 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 ERVFC1-1P60608 527 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 OR2F1Q13607 317 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 RNASE12Q5GAN4 147 aaKnown RBP4.96□□□□□ -1.62
ATXN3-219ENST00000553488 TMEM268Q5VZI3 342 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 NOXA1Q86UR1 476 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 LGI3Q8N145 548 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 RNF182Q8N6D2 247 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 THAP8Q8NA92 274 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 OR52I2Q8NH67 350 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 TERB2Q8NHR7 220 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 ZFAND1Q8TCF1 268 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 TMEM263Q8WUH6 116 aaKnown RBP4.96□□□□□ -1.62
ATXN3-219ENST00000553488 SLC35E1Q96K37 410 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 TRGV9Q99603 122 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 RTBDNQ9BSG5 229 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-219ENST00000553488 RSG1Q9BU20 258 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 SLC25A39Q9BZJ4 359 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-219ENST00000553488 NAA60Q9H7X0 242 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 NOP10Q9NPE3 64 aaKnown RBP4.96□□□□□ -1.62
ATXN3-219ENST00000553488 PTTG2Q9NZH5 202 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 TIMM8BQ9Y5J9 83 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-219ENST00000553488 TMEM56-RWDD3S4R434 201 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 U3KQ87 197 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 RNF213Q63HN8 5207 aa4.96□□□□□ -1.62
ATXN3-219ENST00000553488 TEX13DA0A0J9YY54 714 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-219ENST00000553488 CRYM-AS1A6NIL9 109 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 SNRPGP15A8MWD9 76 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 SMR3BP02814 79 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-219ENST00000553488 SULT1A3P0DMM9 295 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 SULT1A4P0DMN0 295 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 GPX4P36969 197 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-219ENST00000553488 LSM3P62310 102 aaKnown RBP4.95□□□□□ -1.62
ATXN3-219ENST00000553488 HAMPP81172 84 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 OR5I1Q13606 314 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 ZNF493Q6ZR52 646 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 TMEM144Q7Z5S9 345 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 OR4D5Q8NGN0 318 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 OR10J6PQ8NGY7 276 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 DTD1Q8TEA8 209 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 PPP1R14BQ96C90 147 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 YIPF6Q96EC8 236 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 VSIG2Q96IQ7 327 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 LINC01587Q99440 93 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 RBKSQ9H477 322 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 SLC25A22Q9H936 323 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 PPP1R14DQ9NXH3 145 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 COMMD3Q9UBI1 195 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 MTFP1Q9UDX5 166 aa4.95□□□□□ -1.62
ATXN3-219ENST00000553488 A0A087WTM6 91 aa4.94□□□□□ -1.62
ATXN3-219ENST00000553488 A0A096LPF7 62 aa4.94□□□□□ -1.62
ATXN3-219ENST00000553488 SMIM31A0A1B0GVY4 71 aa4.94□□□□□ -1.62
ATXN3-219ENST00000553488 PRSS46E5RG02 174 aa4.94□□□□□ -1.62
ATXN3-219ENST00000553488 H3BRN7 92 aa4.94□□□□□ -1.62
ATXN3-219ENST00000553488 GABARAPH6UMI1 98 aa4.94□□□□□ -1.62
ATXN3-219ENST00000553488 HPGDSO60760 199 aa4.94□□□□□ -1.62
ATXN3-219ENST00000553488 GABARAPO95166 117 aa4.94□□□□□ -1.62
ATXN3-219ENST00000553488 FABP1P07148 127 aa4.94□□□□□ -1.62
ATXN3-219ENST00000553488 HIST1H1AQ02539 215 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-219ENST00000553488 SURF2Q15527 256 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-219ENST00000553488 SCGB2B2Q4G0G5 96 aa4.94□□□□□ -1.62
ATXN3-219ENST00000553488 GPR107Q5VW38 600 aa4.94□□□□□ -1.62
ATXN3-219ENST00000553488 FAAP20Q6NZ36 180 aa4.94□□□□□ -1.62
ATXN3-219ENST00000553488 TMEM182Q6ZP80 229 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-219ENST00000553488 ZNF738Q8NE65 137 aa4.94□□□□□ -1.62
ATXN3-219ENST00000553488 OR8A1Q8NGG7 326 aa4.94□□□□□ -1.62
ATXN3-219ENST00000553488 OR1B1Q8NGR6 318 aa4.94□□□□□ -1.62
ATXN3-219ENST00000553488 IL22RA2Q969J5 263 aa4.94□□□□□ -1.62
ATXN3-219ENST00000553488 GPR82Q96P67 336 aa4.94□□□□□ -1.62
ATXN3-219ENST00000553488 CACFD1Q9UGQ2 172 aa4.94□□□□□ -1.62
ATXN3-219ENST00000553488 TNXBP22105 4242 aa4.93□□□□□ -1.62
ATXN3-219ENST00000553488 LRP2P98164 4655 aa4.93□□□□□ -1.62
ATXN3-219ENST00000553488 A0A087X0K7 114 aa4.93□□□□□ -1.62
ATXN3-219ENST00000553488 GAGE10A6NGK3 116 aa4.93□□□□□ -1.62
ATXN3-219ENST00000553488 H7BYZ3 331 aa4.93□□□□□ -1.62
ATXN3-219ENST00000553488 SIVA1O15304 175 aa4.93□□□□□ -1.62
ATXN3-219ENST00000553488 TNFAIP8O95379 198 aa4.93□□□□□ -1.62
ATXN3-219ENST00000553488 RAB3DO95716 219 aa4.93□□□□□ -1.62
ATXN3-219ENST00000553488 CFDP00746 253 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-219ENST00000553488 PRB4P10163 310 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-219ENST00000553488 HTN1P15515 57 aa4.93□□□□□ -1.62
ATXN3-219ENST00000553488 ZNF182P17025 639 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-219ENST00000553488 CXCL3P19876 107 aa4.93□□□□□ -1.62
ATXN3-219ENST00000553488 GATA2P23769 480 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-219ENST00000553488 CDKN1BP46527 198 aa4.93□□□□□ -1.62
ATXN3-219ENST00000553488 ATP5IP56385 69 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-219ENST00000553488 TAS2R19P59542 299 aa4.93□□□□□ -1.62
ATXN3-219ENST00000553488 NCS1P62166 190 aa4.93□□□□□ -1.62
ATXN3-219ENST00000553488 SMCO1Q147U7 214 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms