RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 SLURP1P55000 103 aa13.4□□□□□ -0.26
PSEN1-206ENST00000553447 SYNJ2BPP57105 145 aa13.4□□□□□ -0.26
PSEN1-206ENST00000553447 KLF5Q13887 457 aaPredicted RBP13.4□□□□□ -0.26
PSEN1-206ENST00000553447 LYPD1Q8N2G4 141 aa13.4□□□□□ -0.26
PSEN1-206ENST00000553447 SVBPQ8N300 66 aa13.4□□□□□ -0.26
PSEN1-206ENST00000553447 TCEAL7Q9BRU2 100 aa13.4□□□□□ -0.26
PSEN1-206ENST00000553447 SMPXQ9UHP9 88 aa13.4□□□□□ -0.26
PSEN1-206ENST00000553447 A0A1W2PRX2 142 aa13.39□□□□□ -0.27
PSEN1-206ENST00000553447 TMEM213A2RRL7 107 aa13.39□□□□□ -0.27
PSEN1-206ENST00000553447 ZNF785A8K8V0 405 aa13.39□□□□□ -0.27
PSEN1-206ENST00000553447 ZNF727A8MUV8 499 aa13.39□□□□□ -0.27
PSEN1-206ENST00000553447 ZNF674Q2M3X9 581 aa13.39□□□□□ -0.27
PSEN1-206ENST00000553447 FAM74A3Q4VXF1 159 aa13.39□□□□□ -0.27
PSEN1-206ENST00000553447 SIGLEC15Q6ZMC9 328 aa13.39□□□□□ -0.27
PSEN1-206ENST00000553447 DUX3Q96PT4 197 aa13.39□□□□□ -0.27
PSEN1-206ENST00000553447 RHPN1-AS1Q9BWJ2 59 aa13.39□□□□□ -0.27
PSEN1-206ENST00000553447 CHEK1O14757 476 aa13.38□□□□□ -0.27
PSEN1-206ENST00000553447 ZNF253O75346 499 aa13.38□□□□□ -0.27
PSEN1-206ENST00000553447 SLC25A5P05141 298 aaKnown RBP13.38□□□□□ -0.27
PSEN1-206ENST00000553447 EDN2P20800 178 aa13.38□□□□□ -0.27
PSEN1-206ENST00000553447 PSG9Q00887 426 aa13.38□□□□□ -0.27
PSEN1-206ENST00000553447 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.38□□□□□ -0.27
PSEN1-206ENST00000553447 EXOC3-AS1Q8N2X6 119 aa13.38□□□□□ -0.27
PSEN1-206ENST00000553447 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.38□□□□□ -0.27
PSEN1-206ENST00000553447 C5orf17Q8NAS9 161 aa13.38□□□□□ -0.27
PSEN1-206ENST00000553447 SMIM7Q9BQ49 75 aa13.38□□□□□ -0.27
PSEN1-206ENST00000553447 NIPSNAP3BQ9BS92 247 aa13.38□□□□□ -0.27
PSEN1-206ENST00000553447 DERL1Q9BUN8 251 aa13.38□□□□□ -0.27
PSEN1-206ENST00000553447 SETXQ7Z333 2677 aaKnown RBP13.38□□□□□ -0.27
PSEN1-206ENST00000553447 PEX7O00628 323 aa13.37□□□□□ -0.27
PSEN1-206ENST00000553447 BMI1P35226 326 aa13.37□□□□□ -0.27
PSEN1-206ENST00000553447 MEOX2P50222 304 aa13.37□□□□□ -0.27
PSEN1-206ENST00000553447 C2CD4CQ8TF44 421 aa13.37□□□□□ -0.27
PSEN1-206ENST00000553447 RAX2Q96IS3 184 aa13.37□□□□□ -0.27
PSEN1-206ENST00000553447 EPDR1Q9UM22 224 aa13.37□□□□□ -0.27
PSEN1-206ENST00000553447 SNAPINO95295 136 aa13.36□□□□□ -0.27
PSEN1-206ENST00000553447 KRTAP10-3P60369 221 aa13.36□□□□□ -0.27
PSEN1-206ENST00000553447 GNG5P63218 68 aa13.36□□□□□ -0.27
PSEN1-206ENST00000553447 FHL3Q13643 280 aa13.36□□□□□ -0.27
PSEN1-206ENST00000553447 HIST1H2BAQ96A08 127 aa13.36□□□□□ -0.27
PSEN1-206ENST00000553447 AAMDCQ9H7C9 122 aa13.36□□□□□ -0.27
PSEN1-206ENST00000553447 NAT8Q9UHE5 227 aa13.36□□□□□ -0.27
PSEN1-206ENST00000553447 HELTA6NFD8 242 aa13.35□□□□□ -0.27
PSEN1-206ENST00000553447 C2orf70A6NJV1 201 aa13.35□□□□□ -0.27
PSEN1-206ENST00000553447 ADARB2-AS1A8MUL3 147 aa13.35□□□□□ -0.27
PSEN1-206ENST00000553447 AKR1C3P42330 323 aa13.35□□□□□ -0.27
PSEN1-206ENST00000553447 FOXL1Q12952 345 aa13.35□□□□□ -0.27
PSEN1-206ENST00000553447 TMEM241Q24JQ0 296 aa13.35□□□□□ -0.27
PSEN1-206ENST00000553447 CLRN3Q8NCR9 226 aa13.35□□□□□ -0.27
PSEN1-206ENST00000553447 CMTM2Q8TAZ6 248 aa13.35□□□□□ -0.27
PSEN1-206ENST00000553447 TVP23CQ96ET8 276 aa13.35□□□□□ -0.27
PSEN1-206ENST00000553447 SLC50A1Q9BRV3 221 aa13.35□□□□□ -0.27
PSEN1-206ENST00000553447 ZNF331Q9NQX6 463 aaPredicted RBP13.35□□□□□ -0.27
PSEN1-206ENST00000553447 RPH3ALQ9UNE2 315 aa13.35□□□□□ -0.27
PSEN1-206ENST00000553447 CCL24O00175 119 aa13.34□□□□□ -0.27
PSEN1-206ENST00000553447 TCRAP04437 139 aa13.34□□□□□ -0.27
PSEN1-206ENST00000553447 RPL35P42766 123 aaKnown RBP13.34□□□□□ -0.27
PSEN1-206ENST00000553447 ATRAIDQ6UW56 229 aa13.34□□□□□ -0.27
PSEN1-206ENST00000553447 DLX4Q92988 240 aaPredicted RBP13.34□□□□□ -0.27
PSEN1-206ENST00000553447 ATG101Q9BSB4 218 aa13.34□□□□□ -0.27
PSEN1-206ENST00000553447 SDF2L1Q9HCN8 221 aa13.34□□□□□ -0.27
PSEN1-206ENST00000553447 PEMTQ9UBM1 199 aa13.34□□□□□ -0.27
PSEN1-206ENST00000553447 M0R036 132 aa13.33□□□□□ -0.28
PSEN1-206ENST00000553447 CBLN1P23435 193 aa13.33□□□□□ -0.28
PSEN1-206ENST00000553447 CNN1P51911 297 aaKnown RBP13.33□□□□□ -0.28
PSEN1-206ENST00000553447 AWAT1Q58HT5 328 aa13.33□□□□□ -0.28
PSEN1-206ENST00000553447 OR9G4Q8NGQ1 327 aa13.33□□□□□ -0.28
PSEN1-206ENST00000553447 TRBV20OR9-2A0A075B6H5 130 aa13.32□□□□□ -0.28
PSEN1-206ENST00000553447 C9JCJ5 164 aa13.32□□□□□ -0.28
PSEN1-206ENST00000553447 M0QZ24 198 aa13.32□□□□□ -0.28
PSEN1-206ENST00000553447 FOLR2P14207 255 aa13.32□□□□□ -0.28
PSEN1-206ENST00000553447 PNRC1Q12796 327 aaPredicted RBP13.32□□□□□ -0.28
PSEN1-206ENST00000553447 TCF24Q7RTU0 167 aa13.32□□□□□ -0.28
PSEN1-206ENST00000553447 NDUFA11Q86Y39 141 aa13.32□□□□□ -0.28
PSEN1-206ENST00000553447 NF1P21359 2839 aa13.31□□□□□ -0.28
PSEN1-206ENST00000553447 TRAV8-2A0A0B4J237 113 aa13.31□□□□□ -0.28
PSEN1-206ENST00000553447 M0R3E3 92 aa13.31□□□□□ -0.28
PSEN1-206ENST00000553447 HLA-DMBP28068 263 aa13.31□□□□□ -0.28
PSEN1-206ENST00000553447 TAS2R60P59551 318 aa13.31□□□□□ -0.28
PSEN1-206ENST00000553447 RPL23P62829 140 aaKnown RBP13.31□□□□□ -0.28
PSEN1-206ENST00000553447 NSUN5P1Q3KNT7 163 aa13.31□□□□□ -0.28
PSEN1-206ENST00000553447 CENPWQ5EE01 88 aa13.31□□□□□ -0.28
PSEN1-206ENST00000553447 IGFL4Q6B9Z1 124 aa13.31□□□□□ -0.28
PSEN1-206ENST00000553447 ADAMTSL5Q6ZMM2 481 aa13.31□□□□□ -0.28
PSEN1-206ENST00000553447 ARL6IP6Q8N6S5 226 aa13.31□□□□□ -0.28
PSEN1-206ENST00000553447 LINC00479Q96M42 142 aa13.31□□□□□ -0.28
PSEN1-206ENST00000553447 NRN1Q9NPD7 142 aa13.31□□□□□ -0.28
PSEN1-206ENST00000553447 PRELID1Q9Y255 219 aa13.31□□□□□ -0.28
PSEN1-206ENST00000553447 KLF12Q9Y4X4 402 aa13.31□□□□□ -0.28
PSEN1-206ENST00000553447 SELENOKQ9Y6D0 94 aa13.31□□□□□ -0.28
PSEN1-206ENST00000553447 TRAV34A0A0B4J273 112 aa13.3□□□□□ -0.28
PSEN1-206ENST00000553447 DIRC3C9JPN6 131 aa13.3□□□□□ -0.28
PSEN1-206ENST00000553447 SOCS3O14543 225 aa13.3□□□□□ -0.28
PSEN1-206ENST00000553447 SCO1O75880 301 aa13.3□□□□□ -0.28
PSEN1-206ENST00000553447 S100A9P06702 114 aaKnown RBP13.3□□□□□ -0.28
PSEN1-206ENST00000553447 CSN1S1P47710 185 aa13.3□□□□□ -0.28
PSEN1-206ENST00000553447 RPL11P62913 178 aaKnown RBP13.3□□□□□ -0.28
PSEN1-206ENST00000553447 ADIRFQ15847 76 aa13.3□□□□□ -0.28
PSEN1-206ENST00000553447 TMEM183BQ1AE95 376 aa13.3□□□□□ -0.28
PSEN1-206ENST00000553447 GOLT1AQ6ZVE7 132 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms