RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 OR4C46A6NHA9 309 aa7.33□□□□□ -1.24
TMEM260-204ENST00000553335 MRPS12O15235 138 aaKnown RBP7.33□□□□□ -1.24
TMEM260-204ENST00000553335 HMGB3O15347 200 aaKnown RBP7.33□□□□□ -1.24
TMEM260-204ENST00000553335 CXorf1O96002 111 aa7.33□□□□□ -1.24
TMEM260-204ENST00000553335 HIST1H1EP10412 219 aaKnown RBP7.33□□□□□ -1.24
TMEM260-204ENST00000553335 BLOC1S1P78537 153 aa7.33□□□□□ -1.24
TMEM260-204ENST00000553335 GUCA2BQ16661 112 aa7.33□□□□□ -1.24
TMEM260-204ENST00000553335 GUK1Q16774 197 aa7.33□□□□□ -1.24
TMEM260-204ENST00000553335 SAMD13Q5VXD3 122 aa7.33□□□□□ -1.24
TMEM260-204ENST00000553335 LCN15Q6UWW0 184 aa7.33□□□□□ -1.24
TMEM260-204ENST00000553335 TMEM61Q8N0U2 210 aa7.33□□□□□ -1.24
TMEM260-204ENST00000553335 FAM167A-AS1Q96KT0 104 aa7.33□□□□□ -1.24
TMEM260-204ENST00000553335 SPAG8Q99932 426 aaPredicted RBP7.33□□□□□ -1.24
TMEM260-204ENST00000553335 MAP1LC3BQ9GZQ8 125 aa7.33□□□□□ -1.24
TMEM260-204ENST00000553335 NRN1Q9NPD7 142 aa7.33□□□□□ -1.24
TMEM260-204ENST00000553335 C19orf73Q9NVV2 129 aa7.33□□□□□ -1.24
TMEM260-204ENST00000553335 UBQLN2Q9UHD9 624 aa7.33□□□□□ -1.24
TMEM260-204ENST00000553335 SMAD5-AS1Q9Y6J3 95 aa7.33□□□□□ -1.24
TMEM260-204ENST00000553335 TRAV2A0A0B4J234 112 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 ZNF705EA8MWA4 302 aaPredicted RBP7.32□□□□□ -1.24
TMEM260-204ENST00000553335 HBE1P02100 147 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 NBEAP1P0C6P0 100 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 PYYP10082 97 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 GP9P14770 177 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 ID1P41134 155 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 FHITP49789 147 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 UBE2L3P68036 154 aaKnown RBP7.32□□□□□ -1.24
TMEM260-204ENST00000553335 ZNF726P1Q15940 193 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 FAM74A1Q5RGS3 127 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 SSX7Q7RTT5 188 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 IQCF2Q8IXL9 164 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 GBGT1Q8N5D6 347 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 ZNF680Q8NEM1 530 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 SFT2D1Q8WV19 159 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 MBD3L1Q8WWY6 194 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 MS4A6AQ9H2W1 248 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 HRH4Q9H3N8 390 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 TMEM167BQ9NRX6 74 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 CMYA5Q8N3K9 4069 aa7.32□□□□□ -1.24
TMEM260-204ENST00000553335 NBEAL1Q6ZS30 2694 aa7.31□□□□□ -1.24
TMEM260-204ENST00000553335 IZUMO1RA6ND01 250 aa7.31□□□□□ -1.24
TMEM260-204ENST00000553335 EIF3GO75821 320 aaKnown RBP eCLIP7.31□□□□□ -1.24
TMEM260-204ENST00000553335 OR10J4P0C629 311 aa7.31□□□□□ -1.24
TMEM260-204ENST00000553335 ARL14EPLP0DKL9 152 aa7.31□□□□□ -1.24
TMEM260-204ENST00000553335 IGLC2P0DOY2 106 aa7.31□□□□□ -1.24
TMEM260-204ENST00000553335 TFPI2P48307 235 aa7.31□□□□□ -1.24
TMEM260-204ENST00000553335 FGF8P55075 233 aaPredicted RBP7.31□□□□□ -1.24
TMEM260-204ENST00000553335 CMC4P56277 68 aaPredicted RBP7.31□□□□□ -1.24
TMEM260-204ENST00000553335 PSG9Q00887 426 aa7.31□□□□□ -1.24
TMEM260-204ENST00000553335 PDE6HQ13956 83 aa7.31□□□□□ -1.24
TMEM260-204ENST00000553335 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.31□□□□□ -1.24
TMEM260-204ENST00000553335 ZNF767PQ75MW2 155 aa7.31□□□□□ -1.24
TMEM260-204ENST00000553335 FXYD5Q96DB9 178 aa7.31□□□□□ -1.24
TMEM260-204ENST00000553335 SAT2Q96F10 170 aaPredicted RBP7.31□□□□□ -1.24
TMEM260-204ENST00000553335 C16orf92Q96LL3 132 aa7.31□□□□□ -1.24
TMEM260-204ENST00000553335 SLC50A1Q9BRV3 221 aa7.31□□□□□ -1.24
TMEM260-204ENST00000553335 ZMAT4Q9H898 229 aa7.31□□□□□ -1.24
TMEM260-204ENST00000553335 CLEC5AQ9NY25 188 aa7.31□□□□□ -1.24
TMEM260-204ENST00000553335 TRBV19A0A075B6N1 114 aa7.3□□□□□ -1.24
TMEM260-204ENST00000553335 H3BQ15 152 aa7.3□□□□□ -1.24
TMEM260-204ENST00000553335 K7EQG2 157 aa7.3□□□□□ -1.24
TMEM260-204ENST00000553335 ZNF253O75346 499 aa7.3□□□□□ -1.24
TMEM260-204ENST00000553335 SNRPCP09234 159 aaKnown RBP7.3□□□□□ -1.24
TMEM260-204ENST00000553335 GCHFRP30047 84 aa7.3□□□□□ -1.24
TMEM260-204ENST00000553335 PSMB3P49720 205 aa7.3□□□□□ -1.24
TMEM260-204ENST00000553335 PPT1P50897 306 aa7.3□□□□□ -1.24
TMEM260-204ENST00000553335 DCANP1Q8TF63 244 aa7.3□□□□□ -1.24
TMEM260-204ENST00000553335 BLNKQ8WV28 456 aa7.3□□□□□ -1.24
TMEM260-204ENST00000553335 ZNF503Q96F45 646 aa7.3□□□□□ -1.24
TMEM260-204ENST00000553335 AAMDCQ9H7C9 122 aa7.3□□□□□ -1.24
TMEM260-204ENST00000553335 ZNF586Q9NXT0 402 aa7.3□□□□□ -1.24
TMEM260-204ENST00000553335 ZNF256Q9Y2P7 627 aaPredicted RBP7.3□□□□□ -1.24
TMEM260-204ENST00000553335 TRRAPQ9Y4A5 3859 aa7.29□□□□□ -1.24
TMEM260-204ENST00000553335 TRAV1-1A0A0B4J248 108 aa7.29□□□□□ -1.24
TMEM260-204ENST00000553335 G3V4G9 280 aa7.29□□□□□ -1.24
TMEM260-204ENST00000553335 H3BTX0 84 aa7.29□□□□□ -1.24
TMEM260-204ENST00000553335 ISLRO14498 428 aa7.29□□□□□ -1.24
TMEM260-204ENST00000553335 RAB14P61106 215 aa7.29□□□□□ -1.24
TMEM260-204ENST00000553335 SNRPD3P62318 126 aaKnown RBP7.29□□□□□ -1.24
TMEM260-204ENST00000553335 EGFEM1PQ0D2K5 195 aa7.29□□□□□ -1.24
TMEM260-204ENST00000553335 BEAN1Q3B7T3 259 aa7.29□□□□□ -1.24
TMEM260-204ENST00000553335 GTSCR1Q86UQ5 136 aa7.29□□□□□ -1.24
TMEM260-204ENST00000553335 LYPD1Q8N2G4 141 aa7.29□□□□□ -1.24
TMEM260-204ENST00000553335 SUN5Q8TC36 379 aa7.29□□□□□ -1.24
TMEM260-204ENST00000553335 C17orf77Q96MU5 243 aa7.29□□□□□ -1.24
TMEM260-204ENST00000553335 TMPRSS5Q9H3S3 457 aa7.29□□□□□ -1.24
TMEM260-204ENST00000553335 ZNF331Q9NQX6 463 aaPredicted RBP7.29□□□□□ -1.24
TMEM260-204ENST00000553335 A0A1B0GV50 99 aa7.28□□□□□ -1.24
TMEM260-204ENST00000553335 SOCS3O14543 225 aa7.28□□□□□ -1.24
TMEM260-204ENST00000553335 IFNA1P01562 189 aa7.28□□□□□ -1.24
TMEM260-204ENST00000553335 RANP62826 216 aaKnown RBP7.28□□□□□ -1.24
TMEM260-204ENST00000553335 LINC00052Q96N35 136 aa7.28□□□□□ -1.24
TMEM260-204ENST00000553335 PRELID1Q9Y255 219 aa7.28□□□□□ -1.24
TMEM260-204ENST00000553335 VWFP04275 2813 aa7.27□□□□□ -1.25
TMEM260-204ENST00000553335 A0A1W2PRE2 83 aa7.27□□□□□ -1.25
TMEM260-204ENST00000553335 OR11H12B2RN74 326 aa7.27□□□□□ -1.25
TMEM260-204ENST00000553335 SLC17A3O00476 420 aa7.27□□□□□ -1.25
TMEM260-204ENST00000553335 NDUFB4O95168 129 aa7.27□□□□□ -1.25
TMEM260-204ENST00000553335 ZNF688P0C7X2 276 aa7.27□□□□□ -1.25
TMEM260-204ENST00000553335 CD81P60033 236 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms