RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 TMEM30BQ3MIR4 351 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 GDF5OSQ5U4N7 250 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 BPIFA4PQ86YQ2 179 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 GBGT1Q8N5D6 347 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 BEND2Q8NDZ0 799 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 TNFRSF14Q92956 283 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 TP53TG3Q9ULZ0 132 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 ITPR3Q14573 2671 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 VWC2LB2RUY7 222 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 ORM1P02763 201 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 PF4V1P10720 104 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 G0S2P27469 103 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 EFNA4P52798 201 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 Q6ZWC4 215 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 ZNF491Q8N8L2 437 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 GPR82Q96P67 336 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 FANCD2OSQ96PS1 177 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 TRGV9Q99603 122 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 CCL19Q99731 98 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 TP73-AS1Q9UF72 201 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 NAGKQ9UJ70 344 aa4.4□□□□□ -1.71
LIMA1-215ENST00000552823 TBL2Q9Y4P3 447 aaKnown RBP4.4□□□□□ -1.71
LIMA1-215ENST00000552823 IGHV4-30-2A0A087WSY4 118 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 BMPR1BO00238 502 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 GCGP01275 180 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 APOHP02749 345 aaPredicted RBP4.39□□□□□ -1.71
LIMA1-215ENST00000552823 CRYGBP07316 175 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 FAM106CPP0CH98 169 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 DDTP30046 118 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 TPPP2P59282 170 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 BLCAPP62952 87 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 Q6ZS46 218 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 TMEM116Q8NCL8 245 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 CFHR4Q92496 578 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 C11orf52Q96A22 123 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 RNF2Q99496 336 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 TXNDC17Q9BRA2 123 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 ARL2-SNX15V9GYD0 113 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 IGHV7-81A0A0B4J1V7 117 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 C9JCJ5 164 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 SMKR1H3BMG3 65 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 IGKV3-20P01619 116 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 HIST1H1EP10412 219 aaKnown RBP4.39□□□□□ -1.71
LIMA1-215ENST00000552823 JOSD1Q15040 202 aaPredicted RBP4.39□□□□□ -1.71
LIMA1-215ENST00000552823 C11orf71Q6IPW1 123 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 TMEM136Q6ZRR5 245 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 SSX8Q7RTT4 187 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 ERASQ7Z444 233 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 THAP8Q8NA92 274 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 C5orf17Q8NAS9 161 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 IGF2BP2-AS1Q96M15 143 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 AAMDCQ9H7C9 122 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 OSTCQ9NRP0 149 aa4.39□□□□□ -1.71
LIMA1-215ENST00000552823 DIRC3C9JPN6 131 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 LY6LH3BQJ8 138 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 M0R2Z0 102 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 SNAI2O43623 268 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 PAX1P15863 534 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 BRS3P32247 399 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 ANKRD39Q53RE8 183 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 Q6ZQT7 251 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 C14orf144Q96I85 54 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 VGLL1Q99990 258 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 NRN1Q9NPD7 142 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 PSG8Q9UQ74 426 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 ITPR2Q14571 2701 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 PRAC2D3DTV9 90 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 H3BUX3 64 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 TRBV12-3P01733 135 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 CRYGCP07315 174 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 ARMS2P0C7Q2 107 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 CT45A10P0DMU9 189 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 GP9P14770 177 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 CSN1S1P47710 185 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 LMO4P61968 165 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 RELQ04864 619 aaPredicted RBP4.38□□□□□ -1.71
LIMA1-215ENST00000552823 FBXL19-AS1Q494R0 122 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 CCDC144NLQ6NUI1 221 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 ZNF562Q6V9R5 426 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 LINC00173Q6ZV60 143 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 C11orf44Q8N8P7 122 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 BORCS7Q96B45 105 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 ZC2HC1AQ96GY0 325 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 C19orf24Q9BVV8 132 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 CENPVL3A0A0U1RRI6 287 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 TMEM213A2RRL7 107 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 IZUMO1RA6ND01 250 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 NPFFO15130 113 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 NCR2O95944 276 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 TRGV3P03979 118 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 LINC00310P59036 64 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 TAS2R60P59551 318 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 CLEC2AQ6UVW9 174 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 Q8N9W7 124 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 LY6G5BQ8NDX9 201 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 GTSF1Q8WW33 167 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 THYN1Q9P016 225 aa4.38□□□□□ -1.71
LIMA1-215ENST00000552823 IGHV2-70DA0A0C4DH43 119 aa4.37□□□□□ -1.71
LIMA1-215ENST00000552823 TGFAP01135 160 aa4.37□□□□□ -1.71
LIMA1-215ENST00000552823 TYMSP04818 313 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms