RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 SH3BGRL3Q9H299 93 aa13.77□□□□□ -0.21
DDX54-209ENST00000551912 ZMAT4Q9H898 229 aa13.77□□□□□ -0.21
DDX54-209ENST00000551912 CYTL1Q9NRR1 136 aa13.77□□□□□ -0.21
DDX54-209ENST00000551912 RPRMQ9NS64 109 aa13.77□□□□□ -0.21
DDX54-209ENST00000551912 KIR2DL5BA0A0G2JN68 375 aa13.76□□□□□ -0.21
DDX54-209ENST00000551912 KIR2DL5BA0A0G2JPC4 375 aa13.76□□□□□ -0.21
DDX54-209ENST00000551912 A0A1W2PPV4 95 aa13.76□□□□□ -0.21
DDX54-209ENST00000551912 KANTRA0A1W2PQU2 76 aa13.76□□□□□ -0.21
DDX54-209ENST00000551912 H3BQ15 152 aa13.76□□□□□ -0.21
DDX54-209ENST00000551912 C1QBP02746 253 aa13.76□□□□□ -0.21
DDX54-209ENST00000551912 RAB2AP61019 212 aa13.76□□□□□ -0.21
DDX54-209ENST00000551912 IGFL4Q6B9Z1 124 aa13.76□□□□□ -0.21
DDX54-209ENST00000551912 KIR2DL5AQ8N109 375 aa13.76□□□□□ -0.21
DDX54-209ENST00000551912 OR10G4Q8NGN3 311 aa13.76□□□□□ -0.21
DDX54-209ENST00000551912 OR10G9Q8NGN4 311 aa13.76□□□□□ -0.21
DDX54-209ENST00000551912 OR10G7Q8NGN6 311 aa13.76□□□□□ -0.21
DDX54-209ENST00000551912 KIR2DL5BQ8NHK3 375 aa13.76□□□□□ -0.21
DDX54-209ENST00000551912 HUWE1Q7Z6Z7 4374 aaKnown RBP13.75□□□□□ -0.21
DDX54-209ENST00000551912 H3BTX0 84 aa13.75□□□□□ -0.21
DDX54-209ENST00000551912 MBP02144 154 aa13.75□□□□□ -0.21
DDX54-209ENST00000551912 PYYP10082 97 aa13.75□□□□□ -0.21
DDX54-209ENST00000551912 HIST1H1EP10412 219 aaKnown RBP13.75□□□□□ -0.21
DDX54-209ENST00000551912 TAS2R45P59539 299 aa13.75□□□□□ -0.21
DDX54-209ENST00000551912 FOXI2Q6ZQN5 318 aa13.75□□□□□ -0.21
DDX54-209ENST00000551912 TRPT1Q86TN4 253 aaKnown RBP13.75□□□□□ -0.21
DDX54-209ENST00000551912 RNF182Q8N6D2 247 aa13.75□□□□□ -0.21
DDX54-209ENST00000551912 SPATA25Q9BR10 227 aa13.75□□□□□ -0.21
DDX54-209ENST00000551912 ZNF331Q9NQX6 463 aaPredicted RBP13.75□□□□□ -0.21
DDX54-209ENST00000551912 ZNF586Q9NXT0 402 aa13.75□□□□□ -0.21
DDX54-209ENST00000551912 BCL2L11O43521 198 aa13.74□□□□□ -0.21
DDX54-209ENST00000551912 PFDN1O60925 122 aa13.74□□□□□ -0.21
DDX54-209ENST00000551912 DEFB1P60022 68 aa13.74□□□□□ -0.21
DDX54-209ENST00000551912 KHDC3LQ587J8 217 aa13.74□□□□□ -0.21
DDX54-209ENST00000551912 FAM122CQ6P4D5 195 aa13.74□□□□□ -0.21
DDX54-209ENST00000551912 SAT2Q96F10 170 aaPredicted RBP13.74□□□□□ -0.21
DDX54-209ENST00000551912 HYLS1Q96M11 299 aa13.74□□□□□ -0.21
DDX54-209ENST00000551912 PAXXQ9BUH6 204 aa13.74□□□□□ -0.21
DDX54-209ENST00000551912 CSTL1Q9H114 145 aa13.74□□□□□ -0.21
DDX54-209ENST00000551912 OR51M1Q9H341 326 aa13.74□□□□□ -0.21
DDX54-209ENST00000551912 SAV1Q9H4B6 383 aaPredicted RBP13.74□□□□□ -0.21
DDX54-209ENST00000551912 AGRNO00468 2067 aa13.74□□□□□ -0.21
DDX54-209ENST00000551912 TRBV19A0A075B6N1 114 aa13.73□□□□□ -0.21
DDX54-209ENST00000551912 H3BMM0 161 aa13.73□□□□□ -0.21
DDX54-209ENST00000551912 SLC17A3O00476 420 aa13.73□□□□□ -0.21
DDX54-209ENST00000551912 UBE2CO00762 179 aa13.73□□□□□ -0.21
DDX54-209ENST00000551912 OR7C2O60412 319 aa13.73□□□□□ -0.21
DDX54-209ENST00000551912 ZNF253O75346 499 aa13.73□□□□□ -0.21
DDX54-209ENST00000551912 HLA-DRB4P13762 266 aa13.73□□□□□ -0.21
DDX54-209ENST00000551912 EBLN2Q6P2I7 272 aa13.73□□□□□ -0.21
DDX54-209ENST00000551912 TMUB2Q71RG4 321 aa13.73□□□□□ -0.21
DDX54-209ENST00000551912 ZNF738Q8NE65 137 aa13.73□□□□□ -0.21
DDX54-209ENST00000551912 HLA-DRB4X5D2U9 266 aa13.73□□□□□ -0.21
DDX54-209ENST00000551912 NBEAL2Q6ZNJ1 2754 aa13.72□□□□□ -0.21
DDX54-209ENST00000551912 HLA-DMBP28068 263 aa13.72□□□□□ -0.21
DDX54-209ENST00000551912 PDE6HQ13956 83 aa13.72□□□□□ -0.21
DDX54-209ENST00000551912 PSG3Q16557 428 aa13.72□□□□□ -0.21
DDX54-209ENST00000551912 TMEM41BQ5BJD5 291 aa13.72□□□□□ -0.21
DDX54-209ENST00000551912 GDF5OSQ5U4N7 250 aa13.72□□□□□ -0.21
DDX54-209ENST00000551912 RPP25LQ8N5L8 163 aaKnown RBP13.72□□□□□ -0.21
DDX54-209ENST00000551912 BLNKQ8WV28 456 aa13.72□□□□□ -0.21
DDX54-209ENST00000551912 RNF141Q8WVD5 230 aa13.72□□□□□ -0.21
DDX54-209ENST00000551912 ZNF471Q9BX82 626 aaPredicted RBP13.72□□□□□ -0.21
DDX54-209ENST00000551912 CLEC5AQ9NY25 188 aa13.72□□□□□ -0.21
DDX54-209ENST00000551912 A0A0J9YX75 114 aa13.71□□□□□ -0.21
DDX54-209ENST00000551912 F6UB75 175 aa13.71□□□□□ -0.21
DDX54-209ENST00000551912 OR10J4P0C629 311 aa13.71□□□□□ -0.21
DDX54-209ENST00000551912 NBEAP1P0C6P0 100 aa13.71□□□□□ -0.21
DDX54-209ENST00000551912 SPP1P10451 314 aa13.71□□□□□ -0.21
DDX54-209ENST00000551912 CDC34P49427 236 aaPredicted RBP13.71□□□□□ -0.21
DDX54-209ENST00000551912 CD300CQ08708 224 aa13.71□□□□□ -0.21
DDX54-209ENST00000551912 LGALSLQ3ZCW2 172 aaPredicted RBP13.71□□□□□ -0.21
DDX54-209ENST00000551912 MORN3Q6PF18 240 aaPredicted RBP13.71□□□□□ -0.21
DDX54-209ENST00000551912 Q6ZWC4 215 aa13.71□□□□□ -0.21
DDX54-209ENST00000551912 FXYD5Q96DB9 178 aa13.71□□□□□ -0.21
DDX54-209ENST00000551912 ZNF503Q96F45 646 aa13.71□□□□□ -0.21
DDX54-209ENST00000551912 U3KQK5 164 aa13.71□□□□□ -0.21
DDX54-209ENST00000551912 EIF3GO75821 320 aaKnown RBP eCLIP13.7□□□□□ -0.22
DDX54-209ENST00000551912 NDUFB4O95168 129 aa13.7□□□□□ -0.22
DDX54-209ENST00000551912 CA1P00915 261 aaPredicted RBP13.7□□□□□ -0.22
DDX54-209ENST00000551912 EIF5AP63241 154 aaKnown RBP13.7□□□□□ -0.22
DDX54-209ENST00000551912 UBE2L3P68036 154 aaKnown RBP13.7□□□□□ -0.22
DDX54-209ENST00000551912 PSG9Q00887 426 aa13.7□□□□□ -0.22
DDX54-209ENST00000551912 AKR1C8PQ5T2L2 129 aa13.7□□□□□ -0.22
DDX54-209ENST00000551912 PQLC2Q6ZP29 291 aa13.7□□□□□ -0.22
DDX54-209ENST00000551912 RCHY1Q96PM5 261 aa13.7□□□□□ -0.22
DDX54-209ENST00000551912 ACTR3CQ9C0K3 210 aaPredicted RBP13.7□□□□□ -0.22
DDX54-209ENST00000551912 RETNQ9HD89 108 aa13.7□□□□□ -0.22
DDX54-209ENST00000551912 NUTF2P61970 127 aaKnown RBP13.69□□□□□ -0.22
DDX54-209ENST00000551912 DEFB135Q30KP9 77 aa13.69□□□□□ -0.22
DDX54-209ENST00000551912 ZFP69Q49AA0 526 aa13.69□□□□□ -0.22
DDX54-209ENST00000551912 OR4B1Q8NGF8 309 aa13.69□□□□□ -0.22
DDX54-209ENST00000551912 RAB24Q969Q5 203 aa13.69□□□□□ -0.22
DDX54-209ENST00000551912 RPUSD4Q96CM3 377 aaKnown RBP13.69□□□□□ -0.22
DDX54-209ENST00000551912 CLUHP3Q96NS8 147 aa13.69□□□□□ -0.22
DDX54-209ENST00000551912 HMGB3O15347 200 aaKnown RBP13.68□□□□□ -0.22
DDX54-209ENST00000551912 DUSP14O95147 198 aaKnown RBP13.68□□□□□ -0.22
DDX54-209ENST00000551912 IGKV3-20P01619 116 aa13.68□□□□□ -0.22
DDX54-209ENST00000551912 AAMDCQ9H7C9 122 aa13.68□□□□□ -0.22
DDX54-209ENST00000551912 ZNF705FA8MVS1 300 aaPredicted RBP13.67□□□□□ -0.22
DDX54-209ENST00000551912 SEC11BP0C7V7 166 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms