RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 FAM231BA6NCW3 169 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 KNCNA6PVL3 124 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 GOSR2O14653 212 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 BET1O15155 118 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 NUPL2O15504 423 aaKnown RBP1.54□□□□□ -2.16
CPSF6-207ENST00000551516 ZNF207O43670 478 aaKnown RBP1.54□□□□□ -2.16
CPSF6-207ENST00000551516 PGLYRP1O75594 196 aaPredicted RBP1.54□□□□□ -2.16
CPSF6-207ENST00000551516 IGKV1-5P01602 117 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 APOA2P02652 100 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 IGLC1P0CG04 106 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 P0DMU3 169 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 FAM231AP0DMU4 169 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 FAM231CP0DMU5 169 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 RNASE2P10153 161 aaKnown RBP1.54□□□□□ -2.16
CPSF6-207ENST00000551516 CRHBPP24387 322 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 FUSP35637 526 aaKnown RBP eCLIP1.54□□□□□ -2.163e-8■■■■□ 26.2
CPSF6-207ENST00000551516 RPL5P46777 297 aaKnown RBP1.54□□□□□ -2.16
CPSF6-207ENST00000551516 CAV2P51636 162 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 TAS2R43P59537 309 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 TAS2R31P59538 309 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 VMA21Q3ZAQ7 101 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 CDNFQ49AH0 187 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 RBM48Q5RL73 367 aaKnown RBP1.54□□□□□ -2.16
CPSF6-207ENST00000551516 AADACL3Q5VUY0 350 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 GLT8D1Q68CQ7 371 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 ZFP1Q6P2D0 407 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 CNIH2Q6PI25 160 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 LHFPL1Q86WI0 220 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 OR5H6Q8NGV6 325 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 OR10J5Q8NHC4 309 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 RPUSD4Q96CM3 377 aaKnown RBP1.54□□□□□ -2.16
CPSF6-207ENST00000551516 CMSS1Q9BQ75 279 aaKnown RBP1.54□□□□□ -2.16
CPSF6-207ENST00000551516 UPK3BQ9BT76 320 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 C9orf16Q9BUW7 83 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 ZNF355PQ9NSJ1 428 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 ABRACLQ9P1F3 81 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 ANXA10Q9UJ72 324 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 CSDC2Q9Y534 153 aaKnown RBP1.54□□□□□ -2.16
CPSF6-207ENST00000551516 IGLV2-18A0A075B6J9 118 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 IGKV1OR2-108A0A075B7D4 117 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 TRAV14DV4A0A0A6YYC5 116 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 IGHV3-21A0A0B4J1V1 117 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 IGHV3-74A0A0B4J1X5 117 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 TRAV8-2A0A0B4J237 113 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 TMEM235A6NFC5 223 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 OR4C46A6NHA9 309 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 C16orf90A8MZG2 172 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 MRPS12O15235 138 aaKnown RBP1.53□□□□□ -2.16
CPSF6-207ENST00000551516 DENRO43583 198 aaKnown RBP1.53□□□□□ -2.16
CPSF6-207ENST00000551516 EIF3GO75821 320 aaKnown RBP eCLIP1.53□□□□□ -2.16
CPSF6-207ENST00000551516 SLC22A5O76082 557 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 MT-CO2P00403 227 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 HPRT1P00492 218 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 PPYP01298 95 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 CHTF8P0CG12 524 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 OR13C7P0DN81 318 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 HLA-DRB4P13762 266 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 AZU1P20160 251 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 F2RP25116 425 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 CD40LGP29965 261 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 TSPOP30536 169 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 TFPI2P48307 235 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 SUB1P53999 127 aaKnown RBP eCLIP1.53□□□□□ -2.16
CPSF6-207ENST00000551516 KRTAP10-6P60371 365 aaPredicted RBP1.53□□□□□ -2.16
CPSF6-207ENST00000551516 PRCDQ00LT1 54 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 MLLT11Q13015 90 aaPredicted RBP1.53□□□□□ -2.16
CPSF6-207ENST00000551516 PLGLAQ15195 96 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 USF2Q15853 346 aaPredicted RBP1.53□□□□□ -2.16
CPSF6-207ENST00000551516 RTL8BQ17RB0 113 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 ESRGQ1W209 222 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 HSD17B12Q53GQ0 312 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 HSP90B2PQ58FF3 399 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 SPANXN2Q5MJ10 180 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 C1orf134Q5TEV5 83 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 FAM222AQ5U5X8 452 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 UBE2UQ5VVX9 321 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 PRSS54Q6PEW0 395 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 PLET1Q6UQ28 207 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 AHSA2Q719I0 299 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 TCF24Q7RTU0 167 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 SPATA12Q7Z6I5 190 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 PACRGLQ8N7B6 248 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 C20orf203Q8NBC4 194 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 OR4C5Q8NGB2 326 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 OR10G9Q8NGN4 311 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 OR4X1Q8NH49 305 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 OR4S2Q8NH73 311 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 VSTM2AQ8TAG5 236 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 NEK7Q8TDX7 302 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 DYNLRB2Q8TF09 96 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 TMEM203Q969S6 136 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 SLC35E1Q96K37 410 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 AUNIPQ9H7T9 357 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 NDUFB11Q9NX14 153 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 TBC1D24Q9ULP9 559 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 HLA-DRB4X5D2U9 266 aa1.53□□□□□ -2.16
CPSF6-207ENST00000551516 A0A0B4J2A0 478 aa1.52□□□□□ -2.17
CPSF6-207ENST00000551516 A0A0J9YX75 114 aa1.52□□□□□ -2.17
CPSF6-207ENST00000551516 SMIM9A6NGZ8 99 aa1.52□□□□□ -2.17
CPSF6-207ENST00000551516 A8MU10 97 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms