RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 TET1Q8NFU7 2136 aa4.15□□□□□ -1.75
LSM3P2-201ENST00000551246 EML6Q6ZMW3 1958 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 GOLGA4Q13439 2230 aaKnown RBP4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 IGLV2-18A0A075B6J9 118 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 IGKV1D-37A0A075B6S9 117 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 IGHV5-51A0A0C4DH38 117 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 A0A0J9YW62 118 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 A8MWV9 139 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 CEACAM4O75871 244 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 DPM2O94777 84 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 DUSP14O95147 198 aaKnown RBP4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 NGFP01138 241 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 IGKCP01834 107 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 TCRAP04437 139 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 ARMS2P0C7Q2 107 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 PATE4P0C8F1 98 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 RNASE2P10153 161 aaKnown RBP4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 B3GALT5-AS1P59052 145 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 LINC00205P59089 165 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 TNFAIP6P98066 277 aaPredicted RBP4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 PRCDQ00LT1 54 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 OR1C1Q15619 314 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 TBC1D28Q2M2D7 210 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 ZNF542PQ5EBM4 170 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 TTC32Q5I0X7 151 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 Q6ZQT7 251 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 Q86TA4 180 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 ANKRD29Q8N6D5 301 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 POM121L12Q8N7R1 296 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 RBMXL3Q8N7X1 1067 aaKnown RBP4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 OR1L4Q8NGR5 311 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 SRXN1Q9BYN0 137 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 PROK2Q9HC23 129 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 PTPRSQ13332 1948 aa4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 TNRC6BQ9UPQ9 1833 aaKnown RBP4.14□□□□□ -1.75
LSM3P2-201ENST00000551246 NCKAP5O14513 1909 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 FAM240AA0A1B0GVK7 77 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 UPK2O00526 184 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 TCL1BO95988 128 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 ELANEP08246 267 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 CGB3P0DN86 165 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 CGB7P0DN87 165 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 PYYP10082 97 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 HLA-DMBP28068 263 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 TNFRSF4P43489 277 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 ZNF134P52741 427 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 GNG5P63218 68 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 ANXA2RQ3ZCQ2 193 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 MRPL51Q4U2R6 128 aaKnown RBP4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 UTF1Q5T230 341 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 LYRM7Q5U5X0 104 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 IGFL4Q6B9Z1 124 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 ZFP2Q6ZN57 461 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 RPS19BP1Q86WX3 136 aaKnown RBP4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 ZNF575Q86XF7 245 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 PDPNQ86YL7 162 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 ORMDL3Q8N138 153 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 SLC22A18ASQ8N1D0 253 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 OR4C13Q8NGP0 309 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 UBALD1Q8TB05 177 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 C1orf43Q9BWL3 253 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 PRRG4Q9BZD6 226 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 SLC25A39Q9BZJ4 359 aaPredicted RBP4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 SPRY4Q9C004 299 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 IMUPQ9GZP8 106 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 C21orf62Q9NYP8 219 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 TMEM14CQ9P0S9 112 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 PROCRQ9UNN8 238 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 CHCHD2Q9Y6H1 151 aaPredicted RBP4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 C2orf16Q68DN1 1984 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 KIAA1549Q9HCM3 1950 aa4.13□□□□□ -1.75
LSM3P2-201ENST00000551246 IGKV3D-15A0A087WSY6 115 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 TRAV12-1A0A0B4J245 112 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 PGPA6NDG6 321 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 D6R8Y8 96 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 K7EMI3 77 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 IL4P05112 153 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 LGALS1P09382 135 aaKnown RBP4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 P0DMU3 169 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 FAM231AP0DMU4 169 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 FAM231CP0DMU5 169 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 LINC00694P0DN24 101 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 GP9P14770 177 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 COX6B1P14854 86 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 LIFP15018 202 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 CRIP1P50238 77 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 ALKBH6Q3KRA9 238 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 ZC2HC1BQ5TFG8 222 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 SDIM1Q6ZPB5 146 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 FAM19A5Q7Z5A7 132 aaPredicted RBP4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 GTSCR1Q86UQ5 136 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 GGNQ86UU5 652 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 Q8N1X5 172 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 ZCCHC24Q8N2G6 241 aaKnown RBP4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 LINC00526Q96FQ7 95 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 RNF185Q96GF1 192 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 TMEM101Q96IK0 257 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 CNFNQ9BYD5 112 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 OTORQ9NRC9 128 aa4.12□□□□□ -1.75
LSM3P2-201ENST00000551246 KLRF1Q9NZS2 232 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms