RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 K7EPK0 472 aa8.98□□□□□ -0.97
PTCH1-221ENST00000550914 NOL3O60936 208 aaKnown RBP8.98□□□□□ -0.97
PTCH1-221ENST00000550914 LINC00869P0C866 280 aa8.98□□□□□ -0.97
PTCH1-221ENST00000550914 CXCL2P19875 107 aa8.98□□□□□ -0.97
PTCH1-221ENST00000550914 CDKN1BP46527 198 aa8.98□□□□□ -0.97
PTCH1-221ENST00000550914 FCN2Q15485 313 aa8.98□□□□□ -0.97
PTCH1-221ENST00000550914 PYDC2Q56P42 97 aa8.98□□□□□ -0.97
PTCH1-221ENST00000550914 OR10J6PQ8NGY7 276 aa8.98□□□□□ -0.97
PTCH1-221ENST00000550914 TMEM263Q8WUH6 116 aaKnown RBP8.98□□□□□ -0.97
PTCH1-221ENST00000550914 ZNF503Q96F45 646 aa8.98□□□□□ -0.97
PTCH1-221ENST00000550914 C20orf144Q9BQM9 153 aa8.98□□□□□ -0.97
PTCH1-221ENST00000550914 OR5G3P0C626 314 aa8.97□□□□□ -0.97
PTCH1-221ENST00000550914 DLK1P80370 383 aa8.97□□□□□ -0.97
PTCH1-221ENST00000550914 CLINT1Q14677 625 aa8.97□□□□□ -0.97
PTCH1-221ENST00000550914 C4orf46Q504U0 113 aa8.97□□□□□ -0.97
PTCH1-221ENST00000550914 PXDC1Q5TGL8 231 aa8.97□□□□□ -0.97
PTCH1-221ENST00000550914 LRRC20Q8TCA0 184 aa8.97□□□□□ -0.97
PTCH1-221ENST00000550914 RNASE8Q8TDE3 154 aaKnown RBP8.97□□□□□ -0.97
PTCH1-221ENST00000550914 RNF141Q8WVD5 230 aa8.97□□□□□ -0.97
PTCH1-221ENST00000550914 SMIM8Q96KF7 97 aa8.97□□□□□ -0.97
PTCH1-221ENST00000550914 UHRF2Q96PU4 802 aa8.97□□□□□ -0.97
PTCH1-221ENST00000550914 NPVFQ9HCQ7 196 aa8.97□□□□□ -0.97
PTCH1-221ENST00000550914 PSENENQ9NZ42 101 aa8.97□□□□□ -0.97
PTCH1-221ENST00000550914 PMS2P5A8MQ11 134 aa8.96□□□□□ -0.98
PTCH1-221ENST00000550914 H7BYZ3 331 aa8.96□□□□□ -0.98
PTCH1-221ENST00000550914 MRPS12O15235 138 aaKnown RBP8.96□□□□□ -0.98
PTCH1-221ENST00000550914 ADAP1O75689 374 aa8.96□□□□□ -0.98
PTCH1-221ENST00000550914 POLR2GP62487 172 aaKnown RBP eCLIP8.96□□□□□ -0.98
PTCH1-221ENST00000550914 TTC32Q5I0X7 151 aa8.96□□□□□ -0.98
PTCH1-221ENST00000550914 LCN15Q6UWW0 184 aa8.96□□□□□ -0.98
PTCH1-221ENST00000550914 LINC00612Q8N6U2 182 aa8.96□□□□□ -0.98
PTCH1-221ENST00000550914 RPUSD4Q96CM3 377 aaKnown RBP8.96□□□□□ -0.98
PTCH1-221ENST00000550914 SLC50A1Q9BRV3 221 aa8.96□□□□□ -0.98
PTCH1-221ENST00000550914 NOP10Q9NPE3 64 aaKnown RBP8.96□□□□□ -0.98
PTCH1-221ENST00000550914 V9GYH0 126 aa8.96□□□□□ -0.98
PTCH1-221ENST00000550914 APOBP04114 4563 aaKnown RBP8.95□□□□□ -0.98
PTCH1-221ENST00000550914 DNAH5Q8TE73 4624 aa8.95□□□□□ -0.98
PTCH1-221ENST00000550914 C9orf170A2RU37 121 aa8.95□□□□□ -0.98
PTCH1-221ENST00000550914 HTN1P15515 57 aa8.95□□□□□ -0.98
PTCH1-221ENST00000550914 BTF3P20290 206 aaKnown RBP8.95□□□□□ -0.98
PTCH1-221ENST00000550914 TEPPQ6URK8 271 aa8.95□□□□□ -0.98
PTCH1-221ENST00000550914 TMEM14EPQ6UXP3 125 aa8.95□□□□□ -0.98
PTCH1-221ENST00000550914 PATE2Q6UY27 113 aa8.95□□□□□ -0.98
PTCH1-221ENST00000550914 SSX7Q7RTT5 188 aa8.95□□□□□ -0.98
PTCH1-221ENST00000550914 MAPKAPK5-AS1Q8N8E1 139 aa8.95□□□□□ -0.98
PTCH1-221ENST00000550914 RXFP4Q8TDU9 374 aa8.95□□□□□ -0.98
PTCH1-221ENST00000550914 ARL6Q9H0F7 186 aa8.95□□□□□ -0.98
PTCH1-221ENST00000550914 ARV1Q9H2C2 271 aa8.95□□□□□ -0.98
PTCH1-221ENST00000550914 Q9H8V8 135 aa8.95□□□□□ -0.98
PTCH1-221ENST00000550914 ZNF331Q9NQX6 463 aaPredicted RBP8.95□□□□□ -0.98
PTCH1-221ENST00000550914 A0A1W2PPQ1 181 aa8.94□□□□□ -0.98
PTCH1-221ENST00000550914 H3BNG1 76 aa8.94□□□□□ -0.98
PTCH1-221ENST00000550914 SSSCA1O60232 199 aa8.94□□□□□ -0.98
PTCH1-221ENST00000550914 ANXA7P20073 488 aaKnown RBP8.94□□□□□ -0.98
PTCH1-221ENST00000550914 M6PRP20645 277 aa8.94□□□□□ -0.98
PTCH1-221ENST00000550914 TAS2R30P59541 319 aa8.94□□□□□ -0.98
PTCH1-221ENST00000550914 ZNF546Q86UE3 836 aa8.94□□□□□ -0.98
PTCH1-221ENST00000550914 CCDC190Q86UF4 302 aa8.94□□□□□ -0.98
PTCH1-221ENST00000550914 OR10P1Q8NGE3 313 aa8.94□□□□□ -0.98
PTCH1-221ENST00000550914 GNPNAT1Q96EK6 184 aaPredicted RBP8.94□□□□□ -0.98
PTCH1-221ENST00000550914 UPK3BQ9BT76 320 aa8.94□□□□□ -0.98
PTCH1-221ENST00000550914 Q9H3A6 140 aa8.94□□□□□ -0.98
PTCH1-221ENST00000550914 MGAT4CQ9UBM8 478 aa8.94□□□□□ -0.98
PTCH1-221ENST00000550914 TSC22D2O75157 780 aa8.93□□□□□ -0.98
PTCH1-221ENST00000550914 S100A5P33763 92 aa8.93□□□□□ -0.98
PTCH1-221ENST00000550914 RRAS2P62070 204 aaPredicted RBP8.93□□□□□ -0.98
PTCH1-221ENST00000550914 BPIFA4PQ86YQ2 179 aa8.93□□□□□ -0.98
PTCH1-221ENST00000550914 CCDC28AQ8IWP9 274 aa8.93□□□□□ -0.98
PTCH1-221ENST00000550914 Q8N1X5 172 aa8.93□□□□□ -0.98
PTCH1-221ENST00000550914 GGACTQ9BVM4 153 aa8.93□□□□□ -0.98
PTCH1-221ENST00000550914 TRAV26-1A0A087WT03 109 aa8.92□□□□□ -0.98
PTCH1-221ENST00000550914 NAP1L6A6NFF2 107 aa8.92□□□□□ -0.98
PTCH1-221ENST00000550914 ZNF701M0R085 212 aaPredicted RBP8.92□□□□□ -0.98
PTCH1-221ENST00000550914 GOSR2O14653 212 aa8.92□□□□□ -0.98
PTCH1-221ENST00000550914 NDUFB6O95139 128 aa8.92□□□□□ -0.98
PTCH1-221ENST00000550914 METTL15P1P0C7V9 234 aa8.92□□□□□ -0.98
PTCH1-221ENST00000550914 OR5I1Q13606 314 aa8.92□□□□□ -0.98
PTCH1-221ENST00000550914 LINC00305Q7Z4B0 112 aa8.92□□□□□ -0.98
PTCH1-221ENST00000550914 SPATA12Q7Z6I5 190 aa8.92□□□□□ -0.98
PTCH1-221ENST00000550914 ODF3Q96PU9 254 aa8.92□□□□□ -0.98
PTCH1-221ENST00000550914 PXMP4Q9Y6I8 212 aa8.92□□□□□ -0.98
PTCH1-221ENST00000550914 AGPAT2O15120 278 aa8.91□□□□□ -0.98
PTCH1-221ENST00000550914 CCNKO75909 580 aa8.91□□□□□ -0.98
PTCH1-221ENST00000550914 RLN2P04090 185 aa8.91□□□□□ -0.98
PTCH1-221ENST00000550914 SLC38A11Q08AI6 406 aa8.91□□□□□ -0.98
PTCH1-221ENST00000550914 GFI1BQ5VTD9 330 aa8.91□□□□□ -0.98
PTCH1-221ENST00000550914 KRTAP1-5Q9BYS1 174 aa8.91□□□□□ -0.98
PTCH1-221ENST00000550914 MRPS16Q9Y3D3 137 aaKnown RBP8.91□□□□□ -0.98
PTCH1-221ENST00000550914 SNURFLB1AK76 121 aa8.9□□□□□ -0.98
PTCH1-221ENST00000550914 COX7A2P2O60397 106 aa8.9□□□□□ -0.98
PTCH1-221ENST00000550914 OR4E1P0C645 316 aa8.9□□□□□ -0.98
PTCH1-221ENST00000550914 IGLC2P0DOY2 106 aa8.9□□□□□ -0.98
PTCH1-221ENST00000550914 DAZ2Q13117 558 aaKnown RBP8.9□□□□□ -0.98
PTCH1-221ENST00000550914 KIR3DS1Q14943 382 aa8.9□□□□□ -0.98
PTCH1-221ENST00000550914 IAH1Q2TAA2 248 aaPredicted RBP8.9□□□□□ -0.98
PTCH1-221ENST00000550914 SPANXN2Q5MJ10 180 aa8.9□□□□□ -0.98
PTCH1-221ENST00000550914 PYGO2Q9BRQ0 406 aa8.9□□□□□ -0.98
PTCH1-221ENST00000550914 GAGE12BA1L429 117 aa8.89□□□□□ -0.99
PTCH1-221ENST00000550914 SLC17A3O00476 420 aa8.89□□□□□ -0.99
PTCH1-221ENST00000550914 GAGE7O76087 117 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms