RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 AESQ08117 197 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 IMPG1Q17R60 797 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 TEX261Q6UWH6 196 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 Q6ZQT7 251 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 MARCH3Q86UD3 253 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 NAA40Q86UY6 237 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 LRP11Q86VZ4 500 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 FUNDC1Q8IVP5 155 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 ZIC4Q8N9L1 334 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 OR8J3Q8NGG0 315 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 PIGXQ8TBF5 258 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 CD200R1Q8TD46 325 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 CASTOR1Q8WTX7 329 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 RNF133Q8WVZ7 376 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 ACOT12Q8WYK0 555 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 CMTM5Q96DZ9 223 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 SFRP2Q96HF1 295 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 PYURFQ96I23 114 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 HOPXQ9BPY8 73 aaPredicted RBP2.37□□□□□ -2.03
LIMA1-205ENST00000550592 DCSTAMPQ9H295 470 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 TPT1P8Q9HAU6 139 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 ZNF586Q9NXT0 402 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 TAAR3PQ9P1P4 343 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 METTL1Q9UBP6 276 aaKnown RBP2.37□□□□□ -2.03
LIMA1-205ENST00000550592 HSPB11Q9Y547 144 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 RBM7Q9Y580 266 aaKnown RBP2.37□□□□□ -2.03
LIMA1-205ENST00000550592 URGCP-MRPS24S4R325 110 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 U3KQ87 197 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 HSPG2P98160 4391 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 PKHD1P08F94 4074 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 FAM183AA6NL82 134 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 C5orf58C9J3I9 102 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 MRASO14807 208 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 ADAP1O75689 374 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 MT-CO2P00403 227 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 IFNA5P01569 189 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 IGHV3-53P01767 116 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 APOC3P02656 99 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 GYPCP04921 128 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 C8GP07360 202 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 CGB3P0DN86 165 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 CGB7P0DN87 165 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 HIST1H1BP16401 226 aaKnown RBP2.36□□□□□ -2.03
LIMA1-205ENST00000550592 ETV6P41212 452 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 AKR1C3P42330 323 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 AQP4P55087 323 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 DNAJB13P59910 316 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 RPS20P60866 119 aaKnown RBP2.36□□□□□ -2.03
LIMA1-205ENST00000550592 DEFA5Q01523 94 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 EMX2Q04743 252 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 TPBGQ13641 420 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 SMIM21Q3B7S5 101 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 AKR1C8PQ5T2L2 129 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 OGFRL1Q5TC84 451 aaPredicted RBP2.36□□□□□ -2.03
LIMA1-205ENST00000550592 NXNL2Q5VZ03 156 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 FAM45BPQ6NSW5 357 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 SMARCD3Q6STE5 483 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 PDZD9Q8IXQ8 264 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 CPNE9Q8IYJ1 553 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 Q8N2B8 174 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 Q8N402 240 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 ACBD7Q8N6N7 88 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 ATP6V1C2Q8NEY4 427 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 PXT1Q8NFP0 134 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 OR52R1Q8NGF1 315 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 OR4X2Q8NGF9 303 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 OR5L1Q8NGL2 311 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 FAM45AQ8TCE6 357 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 CYGBQ8WWM9 190 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 C11orf40Q8WZ69 217 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 RORBQ92753 470 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 CMBLQ96DG6 245 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 ZNF426Q9BUY5 554 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 TMEM109Q9BVC6 243 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 NKX6-2Q9C056 277 aaPredicted RBP2.36□□□□□ -2.03
LIMA1-205ENST00000550592 ABCG5Q9H222 651 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 SPANXA1Q9NS26 97 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 CALML5Q9NZT1 146 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 TMEM216Q9P0N5 145 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 ZNF230Q9UIE0 474 aaPredicted RBP2.36□□□□□ -2.03
LIMA1-205ENST00000550592 FBXL3Q9UKT7 428 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 V9GYS6 101 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 RNF213Q63HN8 5207 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 DNAH11Q96DT5 4516 aa2.36□□□□□ -2.03
LIMA1-205ENST00000550592 MUC2Q02817 5179 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 HMCN2Q8NDA2 5059 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 DYNC1H1Q14204 4646 aaKnown RBP2.35□□□□□ -2.03
LIMA1-205ENST00000550592 A0A1B0GX12 115 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 F6UZH7 168 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 H3BUX3 64 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 AIPO00170 330 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 CXCR6O00574 342 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 PDCD5O14737 125 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 FABP7O15540 132 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 SYNGR1O43759 233 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 ATG12O94817 140 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 CPSF4O95639 269 aaKnown RBP2.35□□□□□ -2.03
LIMA1-205ENST00000550592 CD2P06729 351 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 CPMP14384 443 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 KDELR2P33947 212 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms