RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 MRPS12O15235 138 aaKnown RBP15.16■□□□□ 0.02
SMARCC2-210ENST00000550519 CCNKO75909 580 aa15.16■□□□□ 0.02
SMARCC2-210ENST00000550519 CCL18P55774 89 aa15.16■□□□□ 0.02
SMARCC2-210ENST00000550519 DLK1P80370 383 aa15.16■□□□□ 0.02
SMARCC2-210ENST00000550519 TMEM14EPQ6UXP3 125 aa15.16■□□□□ 0.02
SMARCC2-210ENST00000550519 S100A7AQ86SG5 101 aa15.16■□□□□ 0.02
SMARCC2-210ENST00000550519 RNF141Q8WVD5 230 aa15.16■□□□□ 0.02
SMARCC2-210ENST00000550519 PPP1R14DQ9NXH3 145 aa15.16■□□□□ 0.02
SMARCC2-210ENST00000550519 LINC00588Q9Y4M8 146 aa15.16■□□□□ 0.02
SMARCC2-210ENST00000550519 C16orf90A8MZG2 172 aa15.15■□□□□ 0.02
SMARCC2-210ENST00000550519 FNDC10F2Z333 226 aa15.15■□□□□ 0.02
SMARCC2-210ENST00000550519 SSSCA1O60232 199 aa15.15■□□□□ 0.02
SMARCC2-210ENST00000550519 CDKN1BP46527 198 aa15.15■□□□□ 0.02
SMARCC2-210ENST00000550519 RRAS2P62070 204 aaPredicted RBP15.15■□□□□ 0.02
SMARCC2-210ENST00000550519 ZNF493Q6ZR52 646 aa15.15■□□□□ 0.02
SMARCC2-210ENST00000550519 CCDC190Q86UF4 302 aa15.15■□□□□ 0.02
SMARCC2-210ENST00000550519 LRRC20Q8TCA0 184 aa15.15■□□□□ 0.02
SMARCC2-210ENST00000550519 RPUSD4Q96CM3 377 aaKnown RBP15.15■□□□□ 0.02
SMARCC2-210ENST00000550519 ARL6Q9H0F7 186 aa15.15■□□□□ 0.02
SMARCC2-210ENST00000550519 NPVFQ9HCQ7 196 aa15.15■□□□□ 0.02
SMARCC2-210ENST00000550519 CDK2AP2O75956 126 aa15.14■□□□□ 0.01
SMARCC2-210ENST00000550519 PRB4P10163 310 aaPredicted RBP15.14■□□□□ 0.01
SMARCC2-210ENST00000550519 HTN1P15515 57 aa15.14■□□□□ 0.01
SMARCC2-210ENST00000550519 RNASE8Q8TDE3 154 aaKnown RBP15.14■□□□□ 0.01
SMARCC2-210ENST00000550519 ARV1Q9H2C2 271 aa15.14■□□□□ 0.01
SMARCC2-210ENST00000550519 RNF24Q9Y225 148 aa15.14■□□□□ 0.01
SMARCC2-210ENST00000550519 LRP1BQ9NZR2 4599 aa15.13■□□□□ 0.01
SMARCC2-210ENST00000550519 METTL15P1P0C7V9 234 aa15.13■□□□□ 0.01
SMARCC2-210ENST00000550519 CXCL2P19875 107 aa15.13■□□□□ 0.01
SMARCC2-210ENST00000550519 S100A5P33763 92 aa15.13■□□□□ 0.01
SMARCC2-210ENST00000550519 TMEM263Q8WUH6 116 aaKnown RBP15.13■□□□□ 0.01
SMARCC2-210ENST00000550519 NOP10Q9NPE3 64 aaKnown RBP15.13■□□□□ 0.01
SMARCC2-210ENST00000550519 NDUFB6O95139 128 aa15.12■□□□□ 0.01
SMARCC2-210ENST00000550519 ANXA7P20073 488 aaKnown RBP15.12■□□□□ 0.01
SMARCC2-210ENST00000550519 PXDC1Q5TGL8 231 aa15.12■□□□□ 0.01
SMARCC2-210ENST00000550519 TEPPQ6URK8 271 aa15.12■□□□□ 0.01
SMARCC2-210ENST00000550519 OR10P1Q8NGE3 313 aa15.12■□□□□ 0.01
SMARCC2-210ENST00000550519 C20orf144Q9BQM9 153 aa15.12■□□□□ 0.01
SMARCC2-210ENST00000550519 ZNF331Q9NQX6 463 aaPredicted RBP15.12■□□□□ 0.01
SMARCC2-210ENST00000550519 H7BYZ3 331 aa15.11■□□□□ 0.01
SMARCC2-210ENST00000550519 SLC38A11Q08AI6 406 aa15.11■□□□□ 0.01
SMARCC2-210ENST00000550519 LCN15Q6UWW0 184 aa15.11■□□□□ 0.01
SMARCC2-210ENST00000550519 SSX7Q7RTT5 188 aa15.11■□□□□ 0.01
SMARCC2-210ENST00000550519 MGAT4CQ9UBM8 478 aa15.11■□□□□ 0.01
SMARCC2-210ENST00000550519 FLVCR2Q9UPI3 526 aa15.11■□□□□ 0.01
SMARCC2-210ENST00000550519 OR4E1P0C645 316 aa15.1■□□□□ 0.01
SMARCC2-210ENST00000550519 TAS2R30P59541 319 aa15.1■□□□□ 0.01
SMARCC2-210ENST00000550519 CLINT1Q14677 625 aa15.1■□□□□ 0.01
SMARCC2-210ENST00000550519 KIR3DS1Q14943 382 aa15.1■□□□□ 0.01
SMARCC2-210ENST00000550519 LINC00305Q7Z4B0 112 aa15.1■□□□□ 0.01
SMARCC2-210ENST00000550519 LINC00612Q8N6U2 182 aa15.1■□□□□ 0.01
SMARCC2-210ENST00000550519 SLC50A1Q9BRV3 221 aa15.1■□□□□ 0.01
SMARCC2-210ENST00000550519 SRRQ9GZT4 340 aa15.1■□□□□ 0.01
SMARCC2-210ENST00000550519 NAP1L6A6NFF2 107 aa15.09■□□□□ 0.01
SMARCC2-210ENST00000550519 TSC22D2O75157 780 aa15.09■□□□□ 0.01
SMARCC2-210ENST00000550519 ZNF546Q86UE3 836 aa15.09■□□□□ 0.01
SMARCC2-210ENST00000550519 OR10J6PQ8NGY7 276 aa15.09■□□□□ 0.01
SMARCC2-210ENST00000550519 Q9H8V8 135 aa15.09■□□□□ 0.01
SMARCC2-210ENST00000550519 GOSR2O14653 212 aa15.08■□□□□ 0
SMARCC2-210ENST00000550519 SNRPCP09234 159 aaKnown RBP15.08■□□□□ 0
SMARCC2-210ENST00000550519 ARL16Q0P5N6 197 aa15.08■□□□□ 0
SMARCC2-210ENST00000550519 IAH1Q2TAA2 248 aaPredicted RBP15.08■□□□□ 0
SMARCC2-210ENST00000550519 C4orf46Q504U0 113 aa15.08■□□□□ 0
SMARCC2-210ENST00000550519 BPIFA4PQ86YQ2 179 aa15.08■□□□□ 0
SMARCC2-210ENST00000550519 RCL1Q9Y2P8 373 aaKnown RBP15.08■□□□□ 0
SMARCC2-210ENST00000550519 PRAC2D3DTV9 90 aa15.07■□□□□ 0
SMARCC2-210ENST00000550519 AGPAT2O15120 278 aa15.07■□□□□ 0
SMARCC2-210ENST00000550519 BAK1Q16611 211 aa15.07■□□□□ 0
SMARCC2-210ENST00000550519 GFI1BQ5VTD9 330 aa15.07■□□□□ 0
SMARCC2-210ENST00000550519 ZBTB8BQ8NAP8 495 aaPredicted RBP15.07■□□□□ 0
SMARCC2-210ENST00000550519 RXFP4Q8TDU9 374 aa15.07■□□□□ 0
SMARCC2-210ENST00000550519 TMEM37Q8WXS4 190 aa15.07■□□□□ 0
SMARCC2-210ENST00000550519 GNPNAT1Q96EK6 184 aaPredicted RBP15.07■□□□□ 0
SMARCC2-210ENST00000550519 ZNF503Q96F45 646 aa15.07■□□□□ 0
SMARCC2-210ENST00000550519 GGACTQ9BVM4 153 aa15.07■□□□□ 0
SMARCC2-210ENST00000550519 PARD6GQ9BYG4 376 aaPredicted RBP15.07■□□□□ 0
SMARCC2-210ENST00000550519 TRAV26-1A0A087WT03 109 aa15.06■□□□□ 0
SMARCC2-210ENST00000550519 SLC17A3O00476 420 aa15.06■□□□□ 0
SMARCC2-210ENST00000550519 SCGB1D2O95969 90 aa15.06■□□□□ 0
SMARCC2-210ENST00000550519 M6PRP20645 277 aa15.06■□□□□ 0
SMARCC2-210ENST00000550519 OR5I1Q13606 314 aa15.06■□□□□ 0
SMARCC2-210ENST00000550519 SPANXN2Q5MJ10 180 aa15.06■□□□□ 0
SMARCC2-210ENST00000550519 MORN5Q5VZ52 161 aa15.06■□□□□ 0
SMARCC2-210ENST00000550519 KRTAP1-5Q9BYS1 174 aa15.06■□□□□ 0
SMARCC2-210ENST00000550519 ZNF701M0R085 212 aaPredicted RBP15.05■□□□□ -0
SMARCC2-210ENST00000550519 CCDC28AQ8IWP9 274 aa15.05■□□□□ -0
SMARCC2-210ENST00000550519 MAPKAPK5-AS1Q8N8E1 139 aa15.05■□□□□ -0
SMARCC2-210ENST00000550519 MGST2Q99735 147 aa15.05■□□□□ -0
SMARCC2-210ENST00000550519 C7orf66A4D0T2 115 aa15.04■□□□□ -0
SMARCC2-210ENST00000550519 CCDC160A6NGH7 325 aa15.04■□□□□ -0
SMARCC2-210ENST00000550519 H3BTX0 84 aa15.04■□□□□ -0
SMARCC2-210ENST00000550519 COX7A2P2O60397 106 aa15.04■□□□□ -0
SMARCC2-210ENST00000550519 IGLC2P0DOY2 106 aa15.04■□□□□ -0
SMARCC2-210ENST00000550519 HOXA5P20719 270 aa15.04■□□□□ -0
SMARCC2-210ENST00000550519 INPP1P49441 399 aa15.04■□□□□ -0
SMARCC2-210ENST00000550519 SAT2Q96F10 170 aaPredicted RBP15.04■□□□□ -0
SMARCC2-210ENST00000550519 UPK3BQ9BT76 320 aa15.04■□□□□ -0
SMARCC2-210ENST00000550519 Q9H3A6 140 aa15.04■□□□□ -0
SMARCC2-210ENST00000550519 GSKIPQ9P0R6 139 aa15.04■□□□□ -0
SMARCC2-210ENST00000550519 PXMP4Q9Y6I8 212 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms