RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 ETV2O00321 342 aaPredicted RBP12.86□□□□□ -0.35
RBFOX1-212ENST00000550418 IGHV1-46P01743 117 aa12.86□□□□□ -0.35
RBFOX1-212ENST00000550418 ABCA4P78363 2273 aa12.85□□□□□ -0.35
RBFOX1-212ENST00000550418 RHOGP84095 191 aa12.85□□□□□ -0.35
RBFOX1-212ENST00000550418 ZNF562Q6V9R5 426 aa12.85□□□□□ -0.35
RBFOX1-212ENST00000550418 M0R2P5 195 aa12.85□□□□□ -0.35
RBFOX1-212ENST00000550418 Q8TAT8 98 aa12.85□□□□□ -0.35
RBFOX1-212ENST00000550418 H0YJW9 148 aa12.85□□□□□ -0.35
RBFOX1-212ENST00000550418 TIMM23O14925 209 aa12.85□□□□□ -0.35
RBFOX1-212ENST00000550418 GLMPQ8WWB7 406 aa12.85□□□□□ -0.35
RBFOX1-212ENST00000550418 RNF166Q96A37 237 aaPredicted RBP12.85□□□□□ -0.35
RBFOX1-212ENST00000550418 MED13LQ71F56 2210 aa12.85□□□□□ -0.35
RBFOX1-212ENST00000550418 F8W1H4 67 aa12.85□□□□□ -0.35
RBFOX1-212ENST00000550418 SPRR3Q9UBC9 169 aa12.85□□□□□ -0.35
RBFOX1-212ENST00000550418 IGHV3-64A0A075B6Q5 118 aa12.84□□□□□ -0.35
RBFOX1-212ENST00000550418 TRAV40A0A0B4J280 105 aa12.84□□□□□ -0.35
RBFOX1-212ENST00000550418 IGHV2-70DA0A0C4DH43 119 aa12.84□□□□□ -0.35
RBFOX1-212ENST00000550418 A0A1W2PPM0 123 aa12.84□□□□□ -0.35
RBFOX1-212ENST00000550418 IGKV1-16P04430 117 aa12.84□□□□□ -0.35
RBFOX1-212ENST00000550418 CFHR2P36980 270 aa12.84□□□□□ -0.35
RBFOX1-212ENST00000550418 B3GALT5-AS1P59052 145 aa12.84□□□□□ -0.35
RBFOX1-212ENST00000550418 C2orf82Q6UX34 121 aa12.84□□□□□ -0.35
RBFOX1-212ENST00000550418 NUP37Q8NFH4 326 aa12.84□□□□□ -0.35
RBFOX1-212ENST00000550418 ABHD17AQ96GS6 310 aa12.84□□□□□ -0.35
RBFOX1-212ENST00000550418 DUX5Q96PT3 197 aa12.84□□□□□ -0.35
RBFOX1-212ENST00000550418 GAGE12HA6NDE8 117 aa12.84□□□□□ -0.35
RBFOX1-212ENST00000550418 ATP6V0BQ99437 205 aa12.84□□□□□ -0.35
RBFOX1-212ENST00000550418 TOMM7Q9P0U1 55 aa12.84□□□□□ -0.35
RBFOX1-212ENST00000550418 IGKV1D-17A0A075B6S4 117 aa12.83□□□□□ -0.36
RBFOX1-212ENST00000550418 VWC2Q2TAL6 325 aa12.83□□□□□ -0.36
RBFOX1-212ENST00000550418 TDRG1Q3Y452 100 aa12.83□□□□□ -0.36
RBFOX1-212ENST00000550418 RNASE8Q8TDE3 154 aaKnown RBP12.83□□□□□ -0.36
RBFOX1-212ENST00000550418 PLCE1Q9P212 2302 aa12.83□□□□□ -0.36
RBFOX1-212ENST00000550418 RSPO1Q2MKA7 263 aaPredicted RBP12.83□□□□□ -0.36
RBFOX1-212ENST00000550418 TMEM101Q96IK0 257 aa12.83□□□□□ -0.36
RBFOX1-212ENST00000550418 TMEM14BQ9NUH8 114 aa12.83□□□□□ -0.36
RBFOX1-212ENST00000550418 SLC25A15Q9Y619 301 aa12.83□□□□□ -0.36
RBFOX1-212ENST00000550418 PIEZO1Q92508 2521 aa12.83□□□□□ -0.36
RBFOX1-212ENST00000550418 CHD3Q12873 2000 aaKnown RBP12.83□□□□□ -0.36
RBFOX1-212ENST00000550418 NUPR1O60356 82 aa12.83□□□□□ -0.36
RBFOX1-212ENST00000550418 LGALS9BQ3B8N2 356 aa12.83□□□□□ -0.36
RBFOX1-212ENST00000550418 LGALS9CQ6DKI2 356 aa12.83□□□□□ -0.36
RBFOX1-212ENST00000550418 ZFP36L1Q07352 338 aaKnown RBP12.82□□□□□ -0.36
RBFOX1-212ENST00000550418 FAM104BQ5XKR9 115 aa12.82□□□□□ -0.36
RBFOX1-212ENST00000550418 LCNL1Q6ZST4 164 aa12.82□□□□□ -0.36
RBFOX1-212ENST00000550418 C9JAW5 83 aa12.82□□□□□ -0.36
RBFOX1-212ENST00000550418 TNFRSF6BO95407 300 aa12.82□□□□□ -0.36
RBFOX1-212ENST00000550418 PLXNA4Q9HCM2 1894 aa12.82□□□□□ -0.36
RBFOX1-212ENST00000550418 PCNX2A6NKB5 2137 aa12.82□□□□□ -0.36
RBFOX1-212ENST00000550418 IGKV3D-20A0A0C4DH25 116 aa12.82□□□□□ -0.36
RBFOX1-212ENST00000550418 CD28P10747 220 aa12.82□□□□□ -0.36
RBFOX1-212ENST00000550418 CLEC2AQ6UVW9 174 aa12.82□□□□□ -0.36
RBFOX1-212ENST00000550418 PRSS57Q6UWY2 283 aa12.82□□□□□ -0.36
RBFOX1-212ENST00000550418 CENPVQ7Z7K6 275 aaPredicted RBP12.82□□□□□ -0.36
RBFOX1-212ENST00000550418 DEFB125Q8N687 156 aa12.82□□□□□ -0.36
RBFOX1-212ENST00000550418 FRMPD3Q5JV73 1810 aa12.82□□□□□ -0.36
RBFOX1-212ENST00000550418 TMEM213A2RRL7 107 aa12.82□□□□□ -0.36
RBFOX1-212ENST00000550418 TMEM8BA6NDV4 472 aa12.82□□□□□ -0.36
RBFOX1-212ENST00000550418 LINC01560Q8TB33 94 aa12.82□□□□□ -0.36
RBFOX1-212ENST00000550418 AZU1P20160 251 aa12.81□□□□□ -0.36
RBFOX1-212ENST00000550418 CD59P13987 128 aa12.81□□□□□ -0.36
RBFOX1-212ENST00000550418 TMEM200BQ69YZ2 307 aa12.81□□□□□ -0.36
RBFOX1-212ENST00000550418 PLEKHB2Q96CS7 222 aa12.81□□□□□ -0.36
RBFOX1-212ENST00000550418 IGHV3OR16-10A0A075B7F0 116 aa12.81□□□□□ -0.36
RBFOX1-212ENST00000550418 SPANXA1Q9NS26 97 aa12.81□□□□□ -0.36
RBFOX1-212ENST00000550418 LMO1P25800 156 aa12.81□□□□□ -0.36
RBFOX1-212ENST00000550418 HELZP42694 1942 aaKnown RBP12.81□□□□□ -0.36
RBFOX1-212ENST00000550418 PLXND1Q9Y4D7 1925 aa12.81□□□□□ -0.36
RBFOX1-212ENST00000550418 NOTCH2Q04721 2471 aa12.8□□□□□ -0.36
RBFOX1-212ENST00000550418 K7EN84 100 aa12.8□□□□□ -0.36
RBFOX1-212ENST00000550418 C1orf122Q6ZSJ8 110 aa12.8□□□□□ -0.36
RBFOX1-212ENST00000550418 IGLV3-1P01715 115 aa12.8□□□□□ -0.36
RBFOX1-212ENST00000550418 KLF12Q9Y4X4 402 aa12.8□□□□□ -0.36
RBFOX1-212ENST00000550418 IGHV3-11P01762 117 aa12.8□□□□□ -0.36
RBFOX1-212ENST00000550418 PPDPFLQ8WWR9 84 aa12.8□□□□□ -0.36
RBFOX1-212ENST00000550418 DUX3Q96PT4 197 aa12.8□□□□□ -0.36
RBFOX1-212ENST00000550418 DPH3P1Q9H4G8 78 aa12.8□□□□□ -0.36
RBFOX1-212ENST00000550418 RBMY1BA6NDE4 496 aaKnown RBP12.8□□□□□ -0.36
RBFOX1-212ENST00000550418 RBMY1EA6NEQ0 496 aaKnown RBP12.8□□□□□ -0.36
RBFOX1-212ENST00000550418 OVOL1O14753 267 aa12.8□□□□□ -0.36
RBFOX1-212ENST00000550418 RBMY1DP0C7P1 496 aaKnown RBP12.8□□□□□ -0.36
RBFOX1-212ENST00000550418 RBMY1A1P0DJD3 496 aaKnown RBP12.8□□□□□ -0.36
RBFOX1-212ENST00000550418 RBMY1CP0DJD4 496 aa12.8□□□□□ -0.36
RBFOX1-212ENST00000550418 IGHV1-8P0DP01 117 aa12.8□□□□□ -0.36
RBFOX1-212ENST00000550418 A0A0U1RRA0 63 aa12.79□□□□□ -0.36
RBFOX1-212ENST00000550418 C9orf172C9J069 976 aa12.79□□□□□ -0.36
RBFOX1-212ENST00000550418 LY6DQ14210 128 aa12.79□□□□□ -0.36
RBFOX1-212ENST00000550418 HAX1O00165 279 aa12.79□□□□□ -0.36
RBFOX1-212ENST00000550418 WNT2P09544 360 aa12.79□□□□□ -0.36
RBFOX1-212ENST00000550418 SIGLEC9Q9Y336 463 aa12.78□□□□□ -0.36
RBFOX1-212ENST00000550418 TRBV20-1A0A075B6N2 111 aa12.78□□□□□ -0.36
RBFOX1-212ENST00000550418 IGHV1-3A0A0C4DH29 117 aa12.78□□□□□ -0.36
RBFOX1-212ENST00000550418 TANC1Q9C0D5 1861 aa12.78□□□□□ -0.36
RBFOX1-212ENST00000550418 SHANK2-AS3Q9BTD1 123 aa12.78□□□□□ -0.36
RBFOX1-212ENST00000550418 PDE6HQ13956 83 aa12.78□□□□□ -0.36
RBFOX1-212ENST00000550418 RNF5Q99942 180 aa12.78□□□□□ -0.36
RBFOX1-212ENST00000550418 A0A1W2PPI3 338 aa12.77□□□□□ -0.36
RBFOX1-212ENST00000550418 TICRRQ7Z2Z1 1910 aa12.77□□□□□ -0.36
RBFOX1-212ENST00000550418 LYPD6Q86Y78 171 aa12.77□□□□□ -0.36
RBFOX1-212ENST00000550418 FAM57AQ8TBR7 257 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms