RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, human

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE1B-206	ENST00000550285	MYOZ3	Q8TDC0	251 aa		11.16	□□□□□ -0.62
PDE1B-206	ENST00000550285	YPEL4	Q96NS1	127 aa		11.16	□□□□□ -0.62
PDE1B-206	ENST00000550285	TMEM14C	Q9P0S9	112 aa		11.16	□□□□□ -0.62
PDE1B-206	ENST00000550285	PEF1	Q9UBV8	284 aa	Known RBP	11.16	□□□□□ -0.62
PDE1B-206	ENST00000550285	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.16	□□□□□ -0.62
PDE1B-206	ENST00000550285		A0A1W2PRE2	83 aa		11.15	□□□□□ -0.62
PDE1B-206	ENST00000550285	PDE6D	O43924	150 aa		11.15	□□□□□ -0.62
PDE1B-206	ENST00000550285	ELANE	P08246	267 aa		11.15	□□□□□ -0.62
PDE1B-206	ENST00000550285	IGLC2	P0DOY2	106 aa		11.15	□□□□□ -0.62
PDE1B-206	ENST00000550285	BPIFA4P	Q86YQ2	179 aa		11.15	□□□□□ -0.62
PDE1B-206	ENST00000550285	SMIM7	Q9BQ49	75 aa		11.15	□□□□□ -0.62
PDE1B-206	ENST00000550285	C2orf88	Q9BSF0	95 aa		11.15	□□□□□ -0.62
PDE1B-206	ENST00000550285	CBY1	Q9Y3M2	126 aa		11.15	□□□□□ -0.62
PDE1B-206	ENST00000550285	SMAD5-AS1	Q9Y6J3	95 aa		11.15	□□□□□ -0.62
PDE1B-206	ENST00000550285	EDN2	P20800	178 aa		11.15	□□□□□ -0.63
PDE1B-206	ENST00000550285	SCGB2A2	Q13296	93 aa		11.15	□□□□□ -0.63
PDE1B-206	ENST00000550285	SELENOK	Q9Y6D0	94 aa		11.15	□□□□□ -0.63
PDE1B-206	ENST00000550285	ZNF320	A2RRD8	509 aa		11.14	□□□□□ -0.63
PDE1B-206	ENST00000550285	PGPEP1L	A6NFU8	196 aa		11.14	□□□□□ -0.63
PDE1B-206	ENST00000550285	SLC17A3	O00476	420 aa		11.14	□□□□□ -0.63
PDE1B-206	ENST00000550285	BUB3	O43684	328 aa		11.14	□□□□□ -0.63
PDE1B-206	ENST00000550285	HIST1H1E	P10412	219 aa	Known RBP	11.14	□□□□□ -0.63
PDE1B-206	ENST00000550285	RAB5A	P20339	215 aa		11.14	□□□□□ -0.63
PDE1B-206	ENST00000550285	MYCNOS	P40205	109 aa		11.14	□□□□□ -0.63
PDE1B-206	ENST00000550285	GNG5	P63218	68 aa		11.14	□□□□□ -0.63
PDE1B-206	ENST00000550285	EXOC3-AS1	Q8N2X6	119 aa		11.14	□□□□□ -0.63
PDE1B-206	ENST00000550285	FAM24B	Q8N5W8	94 aa		11.14	□□□□□ -0.63
PDE1B-206	ENST00000550285	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.14	□□□□□ -0.63
PDE1B-206	ENST00000550285	PGP	A6NDG6	321 aa		11.13	□□□□□ -0.63
PDE1B-206	ENST00000550285		B4DEV8	164 aa		11.13	□□□□□ -0.63
PDE1B-206	ENST00000550285		F6UZH7	168 aa		11.13	□□□□□ -0.63
PDE1B-206	ENST00000550285	PNRC1	Q12796	327 aa	Predicted RBP	11.13	□□□□□ -0.63
PDE1B-206	ENST00000550285	OR8I2	Q8N0Y5	310 aa		11.13	□□□□□ -0.63
PDE1B-206	ENST00000550285	RNF152	Q8N8N0	203 aa		11.13	□□□□□ -0.63
PDE1B-206	ENST00000550285	C11orf44	Q8N8P7	122 aa		11.13	□□□□□ -0.63
PDE1B-206	ENST00000550285	LINC00479	Q96M42	142 aa		11.13	□□□□□ -0.63
PDE1B-206	ENST00000550285	ARL2-SNX15	V9GYD0	113 aa		11.13	□□□□□ -0.63
PDE1B-206	ENST00000550285	F8	P00451	2351 aa		11.13	□□□□□ -0.63
PDE1B-206	ENST00000550285	TRBV20OR9-2	A0A075B6H5	130 aa		11.13	□□□□□ -0.63
PDE1B-206	ENST00000550285	CXorf65	A6NEN9	183 aa		11.13	□□□□□ -0.63
PDE1B-206	ENST00000550285	NDUFA4	O00483	81 aa		11.13	□□□□□ -0.63
PDE1B-206	ENST00000550285	GGCT	O75223	188 aa	Known RBP	11.13	□□□□□ -0.63
PDE1B-206	ENST00000550285	TXNDC17	Q9BRA2	123 aa		11.13	□□□□□ -0.63
PDE1B-206	ENST00000550285		Q9H3A6	140 aa		11.13	□□□□□ -0.63
PDE1B-206	ENST00000550285	TRBV19	A0A075B6N1	114 aa		11.12	□□□□□ -0.63
PDE1B-206	ENST00000550285	DEFB136	Q30KP8	78 aa		11.12	□□□□□ -0.63
PDE1B-206	ENST00000550285	TM4SF20	Q53R12	229 aa		11.12	□□□□□ -0.63
PDE1B-206	ENST00000550285	OR4F17	Q8NGA8	305 aa		11.12	□□□□□ -0.63
PDE1B-206	ENST00000550285	LINC01006	Q8NI28	216 aa		11.12	□□□□□ -0.63
PDE1B-206	ENST00000550285	UBE2E2	Q96LR5	201 aa		11.12	□□□□□ -0.63
PDE1B-206	ENST00000550285	METTL26	Q96S19	204 aa		11.12	□□□□□ -0.63
PDE1B-206	ENST00000550285	SDF2L1	Q9HCN8	221 aa		11.12	□□□□□ -0.63
PDE1B-206	ENST00000550285	NIPBL	Q6KC79	2804 aa	eCLIP	11.12	□□□□□ -0.63
PDE1B-206	ENST00000550285	IGHV4OR15-8	A0A075B7B6	117 aa		11.12	□□□□□ -0.63
PDE1B-206	ENST00000550285		A0A087WW49	117 aa		11.12	□□□□□ -0.63
PDE1B-206	ENST00000550285	LGALS1	P09382	135 aa	Known RBP	11.12	□□□□□ -0.63
PDE1B-206	ENST00000550285	C1QL4	Q86Z23	238 aa		11.12	□□□□□ -0.63
PDE1B-206	ENST00000550285	C11orf52	Q96A22	123 aa		11.12	□□□□□ -0.63
PDE1B-206	ENST00000550285	RPH3AL	Q9UNE2	315 aa		11.12	□□□□□ -0.63
PDE1B-206	ENST00000550285		U3KQE9	123 aa		11.12	□□□□□ -0.63
PDE1B-206	ENST00000550285	IGFL4	Q6B9Z1	124 aa		11.11	□□□□□ -0.63
PDE1B-206	ENST00000550285	WIPF2	Q8TF74	440 aa	Predicted RBP	11.11	□□□□□ -0.63
PDE1B-206	ENST00000550285	SGK494	Q96LW2	274 aa		11.11	□□□□□ -0.63
PDE1B-206	ENST00000550285	DUX3	Q96PT4	197 aa		11.11	□□□□□ -0.63
PDE1B-206	ENST00000550285	HAX1	O00165	279 aa		11.11	□□□□□ -0.63
PDE1B-206	ENST00000550285	SLC25A5	P05141	298 aa	Known RBP	11.11	□□□□□ -0.63
PDE1B-206	ENST00000550285	TMEM241	Q24JQ0	296 aa		11.11	□□□□□ -0.63
PDE1B-206	ENST00000550285	PYY3	Q5JQD4	70 aa		11.11	□□□□□ -0.63
PDE1B-206	ENST00000550285	KHDC1L	Q5JSQ8	128 aa		11.11	□□□□□ -0.63
PDE1B-206	ENST00000550285	TMEM190	Q8WZ59	177 aa		11.11	□□□□□ -0.63
PDE1B-206	ENST00000550285	TMEM242	Q9NWH2	141 aa		11.11	□□□□□ -0.63
PDE1B-206	ENST00000550285	TRAV34	A0A0B4J273	112 aa		11.1	□□□□□ -0.63
PDE1B-206	ENST00000550285	RPL7	P18124	248 aa	Known RBP	11.1	□□□□□ -0.63
PDE1B-206	ENST00000550285	RAB4A	P20338	218 aa		11.1	□□□□□ -0.63
PDE1B-206	ENST00000550285	HOXA5	P20719	270 aa		11.1	□□□□□ -0.63
PDE1B-206	ENST00000550285	RPL23	P62829	140 aa	Known RBP	11.1	□□□□□ -0.63
PDE1B-206	ENST00000550285	SIGLEC15	Q6ZMC9	328 aa		11.1	□□□□□ -0.63
PDE1B-206	ENST00000550285	S100A7A	Q86SG5	101 aa		11.1	□□□□□ -0.63
PDE1B-206	ENST00000550285	NAT8	Q9UHE5	227 aa		11.1	□□□□□ -0.63
PDE1B-206	ENST00000550285	ELOB	Q15370	118 aa		11.09	□□□□□ -0.63
PDE1B-206	ENST00000550285	ADIRF	Q15847	76 aa		11.09	□□□□□ -0.63
PDE1B-206	ENST00000550285	CD28	P10747	220 aa		11.09	□□□□□ -0.63
PDE1B-206	ENST00000550285	HLA-DMB	P28068	263 aa		11.09	□□□□□ -0.63
PDE1B-206	ENST00000550285	CDX1	P47902	265 aa	Predicted RBP	11.09	□□□□□ -0.63
PDE1B-206	ENST00000550285	RPEL1	Q2QD12	228 aa		11.09	□□□□□ -0.63
PDE1B-206	ENST00000550285	C16orf95	Q9H693	158 aa		11.09	□□□□□ -0.63
PDE1B-206	ENST00000550285	EPDR1	Q9UM22	224 aa		11.09	□□□□□ -0.63
PDE1B-206	ENST00000550285		M0R3E3	92 aa		11.08	□□□□□ -0.64
PDE1B-206	ENST00000550285	PEX7	O00628	323 aa		11.08	□□□□□ -0.64
PDE1B-206	ENST00000550285	TCAP	O15273	167 aa		11.08	□□□□□ -0.64
PDE1B-206	ENST00000550285	CRLF1	O75462	422 aa		11.08	□□□□□ -0.64
PDE1B-206	ENST00000550285	PKIA	P61925	76 aa		11.08	□□□□□ -0.64
PDE1B-206	ENST00000550285	HELT	A6NFD8	242 aa		11.08	□□□□□ -0.64
PDE1B-206	ENST00000550285	ZNF785	A8K8V0	405 aa		11.08	□□□□□ -0.64
PDE1B-206	ENST00000550285	DDT	P30046	118 aa		11.08	□□□□□ -0.64
PDE1B-206	ENST00000550285	SYNJ2BP	P57105	145 aa		11.08	□□□□□ -0.64
PDE1B-206	ENST00000550285	C16orf54	Q6UWD8	224 aa		11.08	□□□□□ -0.64
PDE1B-206	ENST00000550285	GPHB5	Q86YW7	130 aa		11.08	□□□□□ -0.64
PDE1B-206	ENST00000550285	OCC1	Q8TAD7	63 aa		11.08	□□□□□ -0.64
PDE1B-206	ENST00000550285	OTOR	Q9NRC9	128 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms