RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 LHFPL4Q7Z7J7 247 aa7.38□□□□□ -1.23
PPFIA2-216ENST00000549396 MRPL52Q86TS9 123 aaKnown RBP7.38□□□□□ -1.23
PPFIA2-216ENST00000549396 DPH3Q96FX2 82 aa7.38□□□□□ -1.23
PPFIA2-216ENST00000549396 TRAV9-2A0A087WT02 112 aa7.38□□□□□ -1.23
PPFIA2-216ENST00000549396 MYCNOSP40205 109 aa7.38□□□□□ -1.23
PPFIA2-216ENST00000549396 INSL3P51460 131 aa7.38□□□□□ -1.23
PPFIA2-216ENST00000549396 TMEM131Q92545 1883 aa7.38□□□□□ -1.23
PPFIA2-216ENST00000549396 GAGE10A6NGK3 116 aa7.38□□□□□ -1.23
PPFIA2-216ENST00000549396 KIAA1644Q3SXP7 199 aa7.38□□□□□ -1.23
PPFIA2-216ENST00000549396 TEX43Q6ZNM6 134 aa7.38□□□□□ -1.23
PPFIA2-216ENST00000549396 C11orf52Q96A22 123 aa7.38□□□□□ -1.23
PPFIA2-216ENST00000549396 KIF26BQ2KJY2 2108 aa7.38□□□□□ -1.23
PPFIA2-216ENST00000549396 IGKCP01834 107 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 SS18Q15532 418 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 IGHV1OR15-1A0A075B7D0 117 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 TRGV1A0A0A0MS02 117 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 FCN3O75636 299 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 HTN3P15516 51 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 KLK15Q9H2R5 256 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 ZMAT4Q9H898 229 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 CDKN1BP46527 198 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 FOXA3P55318 350 aaPredicted RBP7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 BOD1L2Q8IYS8 172 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 IFI27L1Q96BM0 104 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 FREM3P0C091 2139 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 C22orf46C9J442 243 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 IGHV4-39P01824 125 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 DEFB131AP59861 70 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 VSIRQ9H7M9 311 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 A0A0G2JRQ6 117 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 TYMSP04818 313 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 RNF224P0DH78 156 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 ERCC8Q13216 396 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 SFTA2Q6UW10 78 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 LYZL1Q6UWQ5 148 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 LINC00469Q8N7U9 141 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 GLMPQ8WWB7 406 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 C20orf144Q9BQM9 153 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 LINC00527Q9UJ94 153 aa7.37□□□□□ -1.23
PPFIA2-216ENST00000549396 CACNA1IQ9P0X4 2223 aa7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 Q6ZRM9 215 aa7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 LINC00574Q9H8X3 128 aa7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 IGLC1P0CG04 106 aa7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 GZMBP10144 247 aa7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 DDTP30046 118 aa7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 ADMP35318 185 aa7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 TCTEX1D4Q5JR98 221 aa7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 EXOC3-AS1Q8N2X6 119 aa7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 UBE2E2Q96LR5 201 aa7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 CTSZQ9UBR2 303 aa7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 EREGO14944 169 aa7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 HOXA3O43365 443 aaPredicted RBP7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 PPIFP30405 207 aaKnown RBP7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 EMP1P54849 157 aa7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 GCSAMLQ5JQS6 135 aa7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 A0A1W2PNU3 283 aaPredicted RBP7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 PLP1P60201 277 aa7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 ZNF493Q6ZR52 646 aa7.36□□□□□ -1.23
PPFIA2-216ENST00000549396 ZNF25P17030 456 aaPredicted RBP7.35□□□□□ -1.23
PPFIA2-216ENST00000549396 RNF151Q2KHN1 245 aa7.35□□□□□ -1.23
PPFIA2-216ENST00000549396 C8orf86Q6ZUL3 223 aa7.35□□□□□ -1.23
PPFIA2-216ENST00000549396 RNF144BQ7Z419 303 aa7.35□□□□□ -1.23
PPFIA2-216ENST00000549396 CEP290O15078 2479 aa7.35□□□□□ -1.23
PPFIA2-216ENST00000549396 IGHV3OR16-8A0A075B7F1 116 aa7.35□□□□□ -1.23
PPFIA2-216ENST00000549396 MDKP21741 143 aaPredicted RBP7.35□□□□□ -1.23
PPFIA2-216ENST00000549396 DAD1P61803 113 aa7.35□□□□□ -1.23
PPFIA2-216ENST00000549396 DEFB112Q30KQ8 113 aa7.35□□□□□ -1.23
PPFIA2-216ENST00000549396 TRAV12-3A0A0B4J271 114 aa7.35□□□□□ -1.23
PPFIA2-216ENST00000549396 MTURNQ8N3F0 131 aa7.35□□□□□ -1.23
PPFIA2-216ENST00000549396 Q8NA96 180 aa7.35□□□□□ -1.23
PPFIA2-216ENST00000549396 OR13C6PQ8NH95 151 aa7.35□□□□□ -1.23
PPFIA2-216ENST00000549396 ZNF524Q96C55 264 aa7.35□□□□□ -1.23
PPFIA2-216ENST00000549396 LY6HO94772 140 aa7.35□□□□□ -1.23
PPFIA2-216ENST00000549396 IL17DQ8TAD2 202 aa7.35□□□□□ -1.23
PPFIA2-216ENST00000549396 PYGO2Q9BRQ0 406 aa7.35□□□□□ -1.23
PPFIA2-216ENST00000549396 LOC107984156A0A0G2JMH3 177 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 KLF17Q5JT82 389 aaPredicted RBP7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 SEM1Q6ZVN7 128 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 ARL17AQ8IVW1 177 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 HS3ST6Q96QI5 342 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 NDUFA3O95167 84 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 PAX9P55771 341 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 NIT1Q86X76 327 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 RSPO3Q9BXY4 272 aaPredicted RBP7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 COL4A3Q01955 1670 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 ZNF134P52741 427 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 CKS1BP61024 79 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 PRB3Q04118 309 aaPredicted RBP7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 SERF1AO75920 110 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 IGKV1-39P01597 117 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 IGKV1D-39P04432 117 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 CRYGCP07315 174 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 PRR20EP86478 221 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 PRR20CP86479 221 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 PRR20DP86480 221 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 PRR20BP86481 221 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 PRR20AP86496 221 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 WT1-ASQ06250 92 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 ZNF876PQ49A33 203 aa7.34□□□□□ -1.23
PPFIA2-216ENST00000549396 C16orf54Q6UWD8 224 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms