RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 GCSAMLQ5JQS6 135 aa7.37□□□□□ -1.23
SMARCD1-206ENST00000549274 LCE2AQ5TA79 106 aaPredicted RBP7.37□□□□□ -1.23
SMARCD1-206ENST00000549274 TEX261Q6UWH6 196 aa7.37□□□□□ -1.23
SMARCD1-206ENST00000549274 ZNF767PQ75MW2 155 aa7.37□□□□□ -1.23
SMARCD1-206ENST00000549274 MIR17HGQ75NE6 70 aa7.37□□□□□ -1.23
SMARCD1-206ENST00000549274 TMEM61Q8N0U2 210 aa7.37□□□□□ -1.23
SMARCD1-206ENST00000549274 ARL6IP6Q8N6S5 226 aa7.37□□□□□ -1.23
SMARCD1-206ENST00000549274 MBD3L1Q8WWY6 194 aa7.37□□□□□ -1.23
SMARCD1-206ENST00000549274 SLC25A2Q9BXI2 301 aa7.37□□□□□ -1.23
SMARCD1-206ENST00000549274 MAP1LC3BQ9GZQ8 125 aa7.37□□□□□ -1.23
SMARCD1-206ENST00000549274 CMYA5Q8N3K9 4069 aa7.37□□□□□ -1.23
SMARCD1-206ENST00000549274 IGHV3OR16-13A0A075B7E8 117 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 IGHV3-74A0A0B4J1X5 117 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 TRAV1-1A0A0B4J248 108 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 IGHV3-66A0A0C4DH42 116 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 ZNF705EA8MWA4 302 aaPredicted RBP7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 IFNA1P01562 189 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 NBEAP1P0C6P0 100 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 GP9P14770 177 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 RAB14P61106 215 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 EGFEM1PQ0D2K5 195 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 ANKRD39Q53RE8 183 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 SPATA31B1PQ5VZV4 182 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 LEMD1Q68G75 181 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 ALKAL2Q6UX46 152 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 ADAMTSL5Q6ZMM2 481 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 MRPL53Q96EL3 112 aaKnown RBP7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 FAM167A-AS1Q96KT0 104 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 C16orf92Q96LL3 132 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 TXNDC17Q9BRA2 123 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 TCEAL7Q9BRU2 100 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 MS4A6AQ9H2W1 248 aa7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 ZNF256Q9Y2P7 627 aaPredicted RBP7.36□□□□□ -1.23
SMARCD1-206ENST00000549274 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
SMARCD1-206ENST00000549274 K7EQG2 157 aa7.35□□□□□ -1.23
SMARCD1-206ENST00000549274 RGS13O14921 159 aa7.35□□□□□ -1.23
SMARCD1-206ENST00000549274 MRPS12O15235 138 aaKnown RBP7.35□□□□□ -1.23
SMARCD1-206ENST00000549274 ARL14EPLP0DKL9 152 aa7.35□□□□□ -1.23
SMARCD1-206ENST00000549274 IGLC2P0DOY2 106 aa7.35□□□□□ -1.23
SMARCD1-206ENST00000549274 GCHFRP30047 84 aa7.35□□□□□ -1.23
SMARCD1-206ENST00000549274 ZNF680Q8NEM1 530 aa7.35□□□□□ -1.23
SMARCD1-206ENST00000549274 SUN5Q8TC36 379 aa7.35□□□□□ -1.23
SMARCD1-206ENST00000549274 SFT2D1Q8WV19 159 aa7.35□□□□□ -1.23
SMARCD1-206ENST00000549274 KRTAP4-6Q9BYQ5 205 aa7.35□□□□□ -1.23
SMARCD1-206ENST00000549274 MANBALQ9NQG1 85 aa7.35□□□□□ -1.23
SMARCD1-206ENST00000549274 TRBV19A0A075B6N1 114 aa7.34□□□□□ -1.23
SMARCD1-206ENST00000549274 SERTM2A0A1B0GWG4 89 aa7.34□□□□□ -1.23
SMARCD1-206ENST00000549274 A0A1W2PRE2 83 aa7.34□□□□□ -1.23
SMARCD1-206ENST00000549274 PRSS47A8MTI9 375 aa7.34□□□□□ -1.23
SMARCD1-206ENST00000549274 OR11H12B2RN74 326 aa7.34□□□□□ -1.23
SMARCD1-206ENST00000549274 CSN1S1P47710 185 aa7.34□□□□□ -1.23
SMARCD1-206ENST00000549274 PMS2P11Q13670 270 aa7.34□□□□□ -1.23
SMARCD1-206ENST00000549274 BEAN1Q3B7T3 259 aa7.34□□□□□ -1.23
SMARCD1-206ENST00000549274 MORN5Q5VZ52 161 aa7.34□□□□□ -1.23
SMARCD1-206ENST00000549274 IQCF2Q8IXL9 164 aa7.34□□□□□ -1.23
SMARCD1-206ENST00000549274 RXFP4Q8TDU9 374 aa7.34□□□□□ -1.23
SMARCD1-206ENST00000549274 DCANP1Q8TF63 244 aa7.34□□□□□ -1.23
SMARCD1-206ENST00000549274 ZNF331Q9NQX6 463 aaPredicted RBP7.34□□□□□ -1.23
SMARCD1-206ENST00000549274 IGKV3-7A0A075B6H7 116 aa7.33□□□□□ -1.24
SMARCD1-206ENST00000549274 TRAV5A0A0B4J249 113 aa7.33□□□□□ -1.24
SMARCD1-206ENST00000549274 F6UZH7 168 aa7.33□□□□□ -1.24
SMARCD1-206ENST00000549274 K7EQM0 130 aa7.33□□□□□ -1.24
SMARCD1-206ENST00000549274 EIF4EBP3O60516 100 aaPredicted RBP7.33□□□□□ -1.24
SMARCD1-206ENST00000549274 FHITP49789 147 aa7.33□□□□□ -1.24
SMARCD1-206ENST00000549274 TNP2Q05952 138 aa7.33□□□□□ -1.24
SMARCD1-206ENST00000549274 ZNF726P1Q15940 193 aa7.33□□□□□ -1.24
SMARCD1-206ENST00000549274 KPRPQ5T749 579 aaPredicted RBP7.33□□□□□ -1.24
SMARCD1-206ENST00000549274 CFAP161Q6P656 301 aa7.33□□□□□ -1.24
SMARCD1-206ENST00000549274 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.33□□□□□ -1.24
SMARCD1-206ENST00000549274 LINC00528Q8N1L1 170 aa7.33□□□□□ -1.24
SMARCD1-206ENST00000549274 CLRN3Q8NCR9 226 aa7.33□□□□□ -1.24
SMARCD1-206ENST00000549274 CMTM2Q8TAZ6 248 aa7.33□□□□□ -1.24
SMARCD1-206ENST00000549274 FXYD5Q96DB9 178 aa7.33□□□□□ -1.24
SMARCD1-206ENST00000549274 OTORQ9NRC9 128 aa7.33□□□□□ -1.24
SMARCD1-206ENST00000549274 RFNGQ9Y644 331 aa7.33□□□□□ -1.24
SMARCD1-206ENST00000549274 SMAD5-AS1Q9Y6J3 95 aa7.33□□□□□ -1.24
SMARCD1-206ENST00000549274 FBLL1A6NHQ2 334 aaKnown RBP7.32□□□□□ -1.24
SMARCD1-206ENST00000549274 NDUFS6O75380 124 aaKnown RBP7.32□□□□□ -1.24
SMARCD1-206ENST00000549274 OR10J4P0C629 311 aa7.32□□□□□ -1.24
SMARCD1-206ENST00000549274 PYYP10082 97 aa7.32□□□□□ -1.24
SMARCD1-206ENST00000549274 EDN2P20800 178 aa7.32□□□□□ -1.24
SMARCD1-206ENST00000549274 TFPI2P48307 235 aa7.32□□□□□ -1.24
SMARCD1-206ENST00000549274 CD81P60033 236 aa7.32□□□□□ -1.24
SMARCD1-206ENST00000549274 EBLN2Q6P2I7 272 aa7.32□□□□□ -1.24
SMARCD1-206ENST00000549274 WFDC3Q8IUB2 231 aa7.32□□□□□ -1.24
SMARCD1-206ENST00000549274 GBGT1Q8N5D6 347 aa7.32□□□□□ -1.24
SMARCD1-206ENST00000549274 BLNKQ8WV28 456 aa7.32□□□□□ -1.24
SMARCD1-206ENST00000549274 ZNF586Q9NXT0 402 aa7.32□□□□□ -1.24
SMARCD1-206ENST00000549274 PKD1L1Q8TDX9 2849 aa7.31□□□□□ -1.24
SMARCD1-206ENST00000549274 IZUMO1RA6ND01 250 aa7.31□□□□□ -1.24
SMARCD1-206ENST00000549274 G3V4G9 280 aa7.31□□□□□ -1.24
SMARCD1-206ENST00000549274 H3BQ15 152 aa7.31□□□□□ -1.24
SMARCD1-206ENST00000549274 SOCS3O14543 225 aa7.31□□□□□ -1.24
SMARCD1-206ENST00000549274 HMGB3O15347 200 aaKnown RBP7.31□□□□□ -1.24
SMARCD1-206ENST00000549274 DUSP14O95147 198 aaKnown RBP7.31□□□□□ -1.24
SMARCD1-206ENST00000549274 GHRHP01286 108 aa7.31□□□□□ -1.24
SMARCD1-206ENST00000549274 ZNF688P0C7X2 276 aa7.31□□□□□ -1.24
SMARCD1-206ENST00000549274 PSG3Q16557 428 aa7.31□□□□□ -1.24
SMARCD1-206ENST00000549274 FOXI2Q6ZQN5 318 aa7.31□□□□□ -1.24
SMARCD1-206ENST00000549274 C5orf17Q8NAS9 161 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms