RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 IGLV2-11P01706 119 aa9.44□□□□□ -0.9
RAPGEF3-219ENST00000549151 CRYGBP07316 175 aa9.44□□□□□ -0.9
RAPGEF3-219ENST00000549151 GRNP28799 593 aaKnown RBP9.44□□□□□ -0.9
RAPGEF3-219ENST00000549151 APOBEC3AP31941 199 aaPredicted RBP9.44□□□□□ -0.9
RAPGEF3-219ENST00000549151 LDLRAD2Q5SZI1 272 aa9.44□□□□□ -0.9
RAPGEF3-219ENST00000549151 PRSS3P2Q8NHM4 247 aa9.44□□□□□ -0.9
RAPGEF3-219ENST00000549151 SCNM1Q9BWG6 230 aa9.44□□□□□ -0.9
RAPGEF3-219ENST00000549151 TMEM191AQ9H0A3 160 aa9.44□□□□□ -0.9
RAPGEF3-219ENST00000549151 CBY3A6NI87 242 aa9.44□□□□□ -0.9
RAPGEF3-219ENST00000549151 HLA-DRB1P01911 266 aa9.44□□□□□ -0.9
RAPGEF3-219ENST00000549151 C8orf49Q96NF6 230 aa9.44□□□□□ -0.9
RAPGEF3-219ENST00000549151 PSG8Q9UQ74 426 aa9.44□□□□□ -0.9
RAPGEF3-219ENST00000549151 COTL1Q14019 142 aa9.43□□□□□ -0.9
RAPGEF3-219ENST00000549151 IGFL4Q6B9Z1 124 aa9.43□□□□□ -0.9
RAPGEF3-219ENST00000549151 COX11Q9Y6N1 276 aa9.43□□□□□ -0.9
RAPGEF3-219ENST00000549151 GNG7O60262 68 aa9.43□□□□□ -0.9
RAPGEF3-219ENST00000549151 CT83Q5H943 113 aa9.43□□□□□ -0.9
RAPGEF3-219ENST00000549151 FAM162BQ5T6X4 162 aa9.43□□□□□ -0.9
RAPGEF3-219ENST00000549151 MUC15Q8N387 334 aa9.43□□□□□ -0.9
RAPGEF3-219ENST00000549151 CHCHD1Q96BP2 118 aaKnown RBP9.43□□□□□ -0.9
RAPGEF3-219ENST00000549151 RNF125Q96EQ8 232 aa9.43□□□□□ -0.9
RAPGEF3-219ENST00000549151 SMIM12Q96EX1 92 aa9.43□□□□□ -0.9
RAPGEF3-219ENST00000549151 TRBV19A0A075B6N1 114 aa9.43□□□□□ -0.9
RAPGEF3-219ENST00000549151 K7EIM0 57 aa9.43□□□□□ -0.9
RAPGEF3-219ENST00000549151 LIPFP07098 398 aa9.43□□□□□ -0.9
RAPGEF3-219ENST00000549151 OR5AL1P0C617 328 aa9.43□□□□□ -0.9
RAPGEF3-219ENST00000549151 SLC25A34Q6PIV7 304 aa9.43□□□□□ -0.9
RAPGEF3-219ENST00000549151 FA2HQ7L5A8 372 aa9.43□□□□□ -0.9
RAPGEF3-219ENST00000549151 OR8A1Q8NGG7 326 aa9.43□□□□□ -0.9
RAPGEF3-219ENST00000549151 SOX21Q9Y651 276 aaPredicted RBP9.43□□□□□ -0.9
RAPGEF3-219ENST00000549151 A0A087X0K7 114 aa9.42□□□□□ -0.9
RAPGEF3-219ENST00000549151 NCBP2LA6PVI3 153 aaKnown RBP9.42□□□□□ -0.9
RAPGEF3-219ENST00000549151 K7EQM0 130 aa9.42□□□□□ -0.9
RAPGEF3-219ENST00000549151 FAM106CPP0CH98 169 aa9.42□□□□□ -0.9
RAPGEF3-219ENST00000549151 CT45A10P0DMU9 189 aa9.42□□□□□ -0.9
RAPGEF3-219ENST00000549151 FAM106AQ4KMX7 169 aa9.42□□□□□ -0.9
RAPGEF3-219ENST00000549151 IGF2-ASQ6U949 168 aa9.42□□□□□ -0.9
RAPGEF3-219ENST00000549151 AP5S1Q9NUS5 200 aa9.42□□□□□ -0.9
RAPGEF3-219ENST00000549151 SELENOKQ9Y6D0 94 aa9.42□□□□□ -0.9
RAPGEF3-219ENST00000549151 ZNF785A8K8V0 405 aa9.42□□□□□ -0.9
RAPGEF3-219ENST00000549151 PLP1P60201 277 aa9.42□□□□□ -0.9
RAPGEF3-219ENST00000549151 RBPJQ06330 500 aa9.42□□□□□ -0.9
RAPGEF3-219ENST00000549151 TMEM213A2RRL7 107 aa9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 B9A039 149 aa9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 RIGQ13278 110 aa9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 FBLN7Q53RD9 439 aa9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 OR4C5Q8NGB2 326 aa9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 SHANK2-AS3Q9BTD1 123 aa9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 GFRA4Q9GZZ7 299 aa9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 RNF24Q9Y225 148 aa9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 MAP1AP78559 2803 aaPredicted RBP9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 CRIP1P50238 77 aa9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 SIGLEC15Q6ZMC9 328 aa9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 ZNF491Q8N8L2 437 aa9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 RNASE8Q8TDE3 154 aaKnown RBP9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 ORAOV1Q8WV07 137 aa9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 NDFIP1Q9BT67 221 aa9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 IGKV2-40A0A087WW87 121 aaPredicted RBP9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 HAX1O00165 279 aa9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 IGKV2D-40P01614 121 aaPredicted RBP9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 CLEC2AQ6UVW9 174 aa9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 TNFRSF14Q92956 283 aa9.41□□□□□ -0.9
RAPGEF3-219ENST00000549151 IFI27P40305 119 aaPredicted RBP9.4□□□□□ -0.9
RAPGEF3-219ENST00000549151 LOXL1Q08397 574 aaPredicted RBP9.4□□□□□ -0.9
RAPGEF3-219ENST00000549151 ZNF672Q499Z4 452 aaPredicted RBP9.4□□□□□ -0.9
RAPGEF3-219ENST00000549151 WFDC3Q8IUB2 231 aa9.4□□□□□ -0.9
RAPGEF3-219ENST00000549151 Q8TAT8 98 aa9.4□□□□□ -0.9
RAPGEF3-219ENST00000549151 NPIPB6E9PJ23 425 aa9.4□□□□□ -0.9
RAPGEF3-219ENST00000549151 NCR2O95944 276 aa9.4□□□□□ -0.9
RAPGEF3-219ENST00000549151 UBE2V1Q13404 147 aa9.4□□□□□ -0.9
RAPGEF3-219ENST00000549151 PSG3Q16557 428 aa9.4□□□□□ -0.9
RAPGEF3-219ENST00000549151 RNF151Q2KHN1 245 aa9.4□□□□□ -0.9
RAPGEF3-219ENST00000549151 NEU4Q8WWR8 484 aaPredicted RBP9.4□□□□□ -0.9
RAPGEF3-219ENST00000549151 AAMDCQ9H7C9 122 aa9.4□□□□□ -0.9
RAPGEF3-219ENST00000549151 ST20Q9HBF5 79 aa9.4□□□□□ -0.9
RAPGEF3-219ENST00000549151 HSPB8Q9UJY1 196 aa9.4□□□□□ -0.9
RAPGEF3-219ENST00000549151 D6R8Y8 96 aa9.39□□□□□ -0.91
RAPGEF3-219ENST00000549151 LYZL1Q6UWQ5 148 aa9.39□□□□□ -0.91
RAPGEF3-219ENST00000549151 AMN1Q8IY45 258 aa9.39□□□□□ -0.91
RAPGEF3-219ENST00000549151 JKAMPQ9P055 326 aa9.39□□□□□ -0.91
RAPGEF3-219ENST00000549151 TMEM14CQ9P0S9 112 aa9.39□□□□□ -0.91
RAPGEF3-219ENST00000549151 SMKR1H3BMG3 65 aa9.39□□□□□ -0.91
RAPGEF3-219ENST00000549151 H3BRN7 92 aa9.39□□□□□ -0.91
RAPGEF3-219ENST00000549151 NBR2O15453 112 aa9.39□□□□□ -0.91
RAPGEF3-219ENST00000549151 FOXE3Q13461 319 aa9.39□□□□□ -0.91
RAPGEF3-219ENST00000549151 PVRIGQ6DKI7 326 aa9.39□□□□□ -0.91
RAPGEF3-219ENST00000549151 OR2T8A6NH00 312 aa9.39□□□□□ -0.91
RAPGEF3-219ENST00000549151 ZNF414Q96IQ9 312 aa9.39□□□□□ -0.91
RAPGEF3-219ENST00000549151 FOXC1Q12948 553 aa9.38□□□□□ -0.91
RAPGEF3-219ENST00000549151 PPP1R14DQ9NXH3 145 aa9.38□□□□□ -0.91
RAPGEF3-219ENST00000549151 DPM3Q9P2X0 92 aa9.38□□□□□ -0.91
RAPGEF3-219ENST00000549151 CHD8Q9HCK8 2581 aa9.38□□□□□ -0.91
RAPGEF3-219ENST00000549151 TMEM189A5PLL7 270 aa9.38□□□□□ -0.91
RAPGEF3-219ENST00000549151 FAM231BA6NCW3 169 aa9.38□□□□□ -0.91
RAPGEF3-219ENST00000549151 CRXO43186 299 aaPredicted RBP9.38□□□□□ -0.91
RAPGEF3-219ENST00000549151 HLA-DMBP28068 263 aa9.38□□□□□ -0.91
RAPGEF3-219ENST00000549151 CSN1S1P47710 185 aa9.38□□□□□ -0.91
RAPGEF3-219ENST00000549151 UQCRFS1P47985 274 aa9.38□□□□□ -0.91
RAPGEF3-219ENST00000549151 IGHV3OR16-13A0A075B7E8 117 aa9.37□□□□□ -0.91
RAPGEF3-219ENST00000549151 IGHV3-74A0A0B4J1X5 117 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms