RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 RAB5CP51148 216 aa12.84□□□□□ -0.35
KRT4-201ENST00000548097 KRTAP10-11P60412 298 aa12.84□□□□□ -0.35
KRT4-201ENST00000548097 DPPA3Q6W0C5 159 aa12.84□□□□□ -0.35
KRT4-201ENST00000548097 DCANP1Q8TF63 244 aa12.84□□□□□ -0.35
KRT4-201ENST00000548097 GCHFRP30047 84 aa12.83□□□□□ -0.35
KRT4-201ENST00000548097 CCL20P78556 96 aa12.83□□□□□ -0.35
KRT4-201ENST00000548097 LCN12Q6JVE5 192 aa12.83□□□□□ -0.35
KRT4-201ENST00000548097 RNF182Q8N6D2 247 aa12.83□□□□□ -0.35
KRT4-201ENST00000548097 HRH4Q9H3N8 390 aa12.83□□□□□ -0.35
KRT4-201ENST00000548097 UBQLN2Q9UHD9 624 aa12.83□□□□□ -0.35
KRT4-201ENST00000548097 SORL1Q92673 2214 aa12.83□□□□□ -0.36
KRT4-201ENST00000548097 CXorf1O96002 111 aa12.83□□□□□ -0.36
KRT4-201ENST00000548097 IFNA7P01567 189 aa12.83□□□□□ -0.36
KRT4-201ENST00000548097 NBEAP1P0C6P0 100 aa12.83□□□□□ -0.36
KRT4-201ENST00000548097 HIST1H1EP10412 219 aaKnown RBP12.83□□□□□ -0.36
KRT4-201ENST00000548097 PQLC2Q6ZP29 291 aa12.83□□□□□ -0.36
KRT4-201ENST00000548097 MBD3L1Q8WWY6 194 aa12.83□□□□□ -0.36
KRT4-201ENST00000548097 ZNF256Q9Y2P7 627 aaPredicted RBP12.83□□□□□ -0.36
KRT4-201ENST00000548097 TRBV19A0A075B6N1 114 aa12.82□□□□□ -0.36
KRT4-201ENST00000548097 SOCS3O14543 225 aa12.82□□□□□ -0.36
KRT4-201ENST00000548097 NDUFB4O95168 129 aa12.82□□□□□ -0.36
KRT4-201ENST00000548097 CD7P09564 240 aa12.82□□□□□ -0.36
KRT4-201ENST00000548097 DEFB1P60022 68 aa12.82□□□□□ -0.36
KRT4-201ENST00000548097 SAMD5Q5TGI4 173 aa12.82□□□□□ -0.36
KRT4-201ENST00000548097 LRRC20Q8TCA0 184 aa12.82□□□□□ -0.36
KRT4-201ENST00000548097 SAT2Q96F10 170 aaPredicted RBP12.82□□□□□ -0.36
KRT4-201ENST00000548097 C16orf92Q96LL3 132 aa12.82□□□□□ -0.36
KRT4-201ENST00000548097 RNF24Q9Y225 148 aa12.82□□□□□ -0.36
KRT4-201ENST00000548097 MGAM2Q2M2H8 2515 aa12.82□□□□□ -0.36
KRT4-201ENST00000548097 A0A087X0K7 114 aa12.81□□□□□ -0.36
KRT4-201ENST00000548097 TRAV8-2A0A0B4J237 113 aa12.81□□□□□ -0.36
KRT4-201ENST00000548097 TRAV25A0A0B4J276 109 aa12.81□□□□□ -0.36
KRT4-201ENST00000548097 K7EQG2 157 aa12.81□□□□□ -0.36
KRT4-201ENST00000548097 WIPF1O43516 503 aa12.81□□□□□ -0.36
KRT4-201ENST00000548097 ZNF688P0C7X2 276 aa12.81□□□□□ -0.36
KRT4-201ENST00000548097 UBE2G2P60604 165 aa12.81□□□□□ -0.36
KRT4-201ENST00000548097 PAFAH1B2P68402 229 aa12.81□□□□□ -0.36
KRT4-201ENST00000548097 ZNF124Q15973 351 aa12.81□□□□□ -0.36
KRT4-201ENST00000548097 EXOC3-AS1Q8N2X6 119 aa12.81□□□□□ -0.36
KRT4-201ENST00000548097 SPAG8Q99932 426 aaPredicted RBP12.81□□□□□ -0.36
KRT4-201ENST00000548097 TEX46H3BTG2 121 aa12.81□□□□□ -0.36
KRT4-201ENST00000548097 CD5P06127 495 aa12.81□□□□□ -0.36
KRT4-201ENST00000548097 RANP62826 216 aaKnown RBP12.81□□□□□ -0.36
KRT4-201ENST00000548097 OR2K2Q8NGT1 345 aa12.81□□□□□ -0.36
KRT4-201ENST00000548097 C20orf173Q96LM9 149 aa12.81□□□□□ -0.36
KRT4-201ENST00000548097 PRR25Q96S07 402 aa12.81□□□□□ -0.36
KRT4-201ENST00000548097 WFDC10AQ9H1F0 79 aa12.81□□□□□ -0.36
KRT4-201ENST00000548097 PRB2P02812 416 aaPredicted RBP12.8□□□□□ -0.36
KRT4-201ENST00000548097 ZNF767PQ75MW2 155 aa12.8□□□□□ -0.36
KRT4-201ENST00000548097 LINC00052Q96N35 136 aa12.8□□□□□ -0.36
KRT4-201ENST00000548097 ZNF331Q9NQX6 463 aaPredicted RBP12.79□□□□□ -0.36
KRT4-201ENST00000548097 OR4C46A6NHA9 309 aa12.78□□□□□ -0.36
KRT4-201ENST00000548097 ZNF705FA8MVS1 300 aaPredicted RBP12.78□□□□□ -0.36
KRT4-201ENST00000548097 BEAN1Q3B7T3 259 aa12.78□□□□□ -0.36
KRT4-201ENST00000548097 PSMG4Q5JS54 123 aa12.78□□□□□ -0.36
KRT4-201ENST00000548097 M0R3E3 92 aa12.78□□□□□ -0.36
KRT4-201ENST00000548097 BLOC1S1P78537 153 aa12.78□□□□□ -0.36
KRT4-201ENST00000548097 ODF3L2Q3SX64 289 aa12.78□□□□□ -0.36
KRT4-201ENST00000548097 APRG1Q8IVJ8 170 aa12.78□□□□□ -0.36
KRT4-201ENST00000548097 GPR61Q9BZJ8 451 aa12.78□□□□□ -0.36
KRT4-201ENST00000548097 YTHDF2Q9Y5A9 579 aaKnown RBP12.78□□□□□ -0.36
KRT4-201ENST00000548097 NMBP08949 121 aa12.77□□□□□ -0.37
KRT4-201ENST00000548097 DEFB131AP59861 70 aa12.77□□□□□ -0.37
KRT4-201ENST00000548097 CD81P60033 236 aa12.77□□□□□ -0.37
KRT4-201ENST00000548097 EGFEM1PQ0D2K5 195 aa12.77□□□□□ -0.37
KRT4-201ENST00000548097 ICAM4Q14773 271 aa12.77□□□□□ -0.37
KRT4-201ENST00000548097 GUK1Q16774 197 aa12.77□□□□□ -0.37
KRT4-201ENST00000548097 SUN5Q8TC36 379 aa12.77□□□□□ -0.37
KRT4-201ENST00000548097 Q9H3A6 140 aa12.77□□□□□ -0.37
KRT4-201ENST00000548097 MAP6D1Q9H9H5 199 aa12.77□□□□□ -0.37
KRT4-201ENST00000548097 TMEM167BQ9NRX6 74 aa12.77□□□□□ -0.37
KRT4-201ENST00000548097 GNG13Q9P2W3 67 aa12.77□□□□□ -0.37
KRT4-201ENST00000548097 NOTCH1P46531 2555 aa12.77□□□□□ -0.37
KRT4-201ENST00000548097 F6UB75 175 aa12.76□□□□□ -0.37
KRT4-201ENST00000548097 MEOX2P50222 304 aa12.76□□□□□ -0.37
KRT4-201ENST00000548097 DNAH3Q8TD57 4116 aa12.76□□□□□ -0.37
KRT4-201ENST00000548097 TRAV1-1A0A0B4J248 108 aa12.76□□□□□ -0.37
KRT4-201ENST00000548097 ISLRO14498 428 aa12.76□□□□□ -0.37
KRT4-201ENST00000548097 PAGE4O60829 102 aa12.76□□□□□ -0.37
KRT4-201ENST00000548097 ZNF705DP0CH99 300 aaPredicted RBP12.76□□□□□ -0.37
KRT4-201ENST00000548097 ZNF705BP0CI00 300 aaPredicted RBP12.76□□□□□ -0.37
KRT4-201ENST00000548097 PGPA6NDG6 321 aa12.75□□□□□ -0.37
KRT4-201ENST00000548097 GGTLC3B5MD39 225 aa12.75□□□□□ -0.37
KRT4-201ENST00000548097 PRAC2D3DTV9 90 aa12.75□□□□□ -0.37
KRT4-201ENST00000548097 HBE1P02100 147 aa12.75□□□□□ -0.37
KRT4-201ENST00000548097 PDE6HQ13956 83 aa12.75□□□□□ -0.37
KRT4-201ENST00000548097 SLC50A1Q9BRV3 221 aa12.75□□□□□ -0.37
KRT4-201ENST00000548097 RPH3ALQ9UNE2 315 aa12.75□□□□□ -0.37
KRT4-201ENST00000548097 NBEAL1Q6ZS30 2694 aa12.74□□□□□ -0.37
KRT4-201ENST00000548097 TRAV2A0A0B4J234 112 aa12.74□□□□□ -0.37
KRT4-201ENST00000548097 FAM74A7A6NL05 159 aa12.74□□□□□ -0.37
KRT4-201ENST00000548097 ID1P41134 155 aa12.74□□□□□ -0.37
KRT4-201ENST00000548097 ATP5G3P48201 142 aa12.74□□□□□ -0.37
KRT4-201ENST00000548097 PSMB3P49720 205 aa12.74□□□□□ -0.37
KRT4-201ENST00000548097 SNRPD3P62318 126 aaKnown RBP12.74□□□□□ -0.37
KRT4-201ENST00000548097 SUMO1P63165 101 aaKnown RBP12.74□□□□□ -0.37
KRT4-201ENST00000548097 GNG5P63218 68 aa12.74□□□□□ -0.37
KRT4-201ENST00000548097 PSG9Q00887 426 aa12.74□□□□□ -0.37
KRT4-201ENST00000548097 HAGHQ16775 308 aa12.74□□□□□ -0.37
KRT4-201ENST00000548097 GDF5OSQ5U4N7 250 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms