RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 TP53I3Q53FA7 332 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 COQ5Q5HYK3 327 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 LINC01556Q5JQF7 62 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 OR2G6Q5TZ20 316 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 SPATA31B1PQ5VZV4 182 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 AMTNQ6UX39 209 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 NEGR1Q7Z3B1 354 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 TMEM144Q7Z5S9 345 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 BAP18Q8IXM2 172 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 OR10W1Q8NGF6 305 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 OR52E5Q8NH55 327 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 VSTM2AQ8TAG5 236 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 MCUR1Q96AQ8 359 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 TLCD1Q96CP7 247 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 PYURFQ96I23 114 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 NARS2Q96I59 477 aaKnown RBP1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 LINC00052Q96N35 136 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 METTL26Q96S19 204 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 NIPSNAP1Q9BPW8 284 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 FAAP24Q9BTP7 215 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 SELENOIQ9C0D9 397 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 RIBC2Q9H4K1 309 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 BANF2Q9H503 90 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 GID8Q9NWU2 228 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 TAS2R4Q9NYW5 299 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 PSORS1C2Q9UIG4 136 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 GNG8Q9UK08 70 aa1.26□□□□□ -2.21
DEPDC4-204ENST00000547823 A0A0J9YX75 114 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 BBIP1A8MTZ0 92 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 M0R2Z0 102 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 NME4O00746 187 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 TAAR5O14804 337 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 PRKYO43930 277 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 GNG7O60262 68 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 ZNF324O75467 553 aaPredicted RBP1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 SNAPINO95295 136 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 MT-CO2P00403 227 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 RLN2P04090 185 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 FABP3P05413 133 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 HTR1AP08908 422 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 CHTF8P0CG12 524 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 CRYGAP11844 174 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 ANXA8P13928 327 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 HTN1P15515 57 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 CELP19835 753 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 MNAT1P51948 309 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 CLDN12P56749 244 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 TAS2R43P59537 309 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 CNBPP62633 177 aaKnown RBP1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 RPL30P62888 115 aaKnown RBP1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 CDK5Q00535 292 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 PRCDQ00LT1 54 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 IFFO1Q0D2I5 559 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 CIRBPQ14011 172 aaKnown RBP1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 INSL4Q14641 139 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 MRPL23Q16540 153 aaKnown RBP1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 SPINK13Q1W4C9 94 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 ACSM3Q53FZ2 586 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 AADACL4Q5VUY2 407 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 TMEM236Q5W0B7 351 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 TTC23Q5W5X9 447 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 THOC7Q6I9Y2 204 aaKnown RBP1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 GLYATQ6IB77 296 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 EBLN2Q6P2I7 272 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 GLIPR1L1Q6UWM5 242 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 ZNF493Q6ZR52 646 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 C6orf201Q7Z4U5 140 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 ARPINQ7Z6K5 226 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 TMEM256Q8N2U0 113 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 ZNF664Q8N3J9 261 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 ZFP41Q8N8Y5 198 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 OR11H7Q8NGC8 314 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 ATP6V0E2Q8NHE4 81 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 GIPC3Q8TF64 312 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 TMEM263Q8WUH6 116 aaKnown RBP1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 DYDC1Q8WWB3 177 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 PINX1Q96BK5 328 aaKnown RBP1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 RNF185Q96GF1 192 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 LINC01587Q99440 93 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 PDCD1LG2Q9BQ51 273 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 HDHD3Q9BSH5 251 aaPredicted RBP1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 SPXQ9BT56 116 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 KRTAP4-1Q9BYQ7 146 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 COMMD5Q9GZQ3 224 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 BET1LQ9NYM9 111 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 MRPS7Q9Y2R9 242 aaKnown RBP1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 PRELID3BQ9Y3B1 194 aa1.25□□□□□ -2.21
DEPDC4-204ENST00000547823 TRGV2A0A075B6R0 118 aa1.24□□□□□ -2.21
DEPDC4-204ENST00000547823 TRAV12-2A0A075B6T6 113 aa1.24□□□□□ -2.21
DEPDC4-204ENST00000547823 TRAV8-3A0A0A6YYJ7 113 aa1.24□□□□□ -2.21
DEPDC4-204ENST00000547823 TRAV8-1A0A0A6YYK1 113 aa1.24□□□□□ -2.21
DEPDC4-204ENST00000547823 TEX50A0A1B0GTY4 177 aa1.24□□□□□ -2.21
DEPDC4-204ENST00000547823 TMEM235A6NFC5 223 aa1.24□□□□□ -2.21
DEPDC4-204ENST00000547823 TRDCB7Z8K6 153 aa1.24□□□□□ -2.21
DEPDC4-204ENST00000547823 M0R129 80 aa1.24□□□□□ -2.21
DEPDC4-204ENST00000547823 UPK2O00526 184 aa1.24□□□□□ -2.21
DEPDC4-204ENST00000547823 ISLRO14498 428 aa1.24□□□□□ -2.21
DEPDC4-204ENST00000547823 BET1O15155 118 aa1.24□□□□□ -2.21
DEPDC4-204ENST00000547823 RGS16O15492 202 aaPredicted RBP1.24□□□□□ -2.21
DEPDC4-204ENST00000547823 PITX3O75364 302 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms