RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 TMEM14CQ9P0S9 112 aa10.43□□□□□ -0.74
PTCH1-212ENST00000546744 F8VRH5 84 aa10.42□□□□□ -0.74
PTCH1-212ENST00000546744 RNASE1P07998 156 aaKnown RBP10.42□□□□□ -0.74
PTCH1-212ENST00000546744 PRR19A6NJB7 356 aa10.42□□□□□ -0.74
PTCH1-212ENST00000546744 ZNF883P0CG24 379 aa10.42□□□□□ -0.74
PTCH1-212ENST00000546744 SHANK2-AS3Q9BTD1 123 aa10.42□□□□□ -0.74
PTCH1-212ENST00000546744 HIGD1BQ9P298 99 aa10.42□□□□□ -0.74
PTCH1-212ENST00000546744 IGKV1-6A0A0C4DH72 117 aa10.42□□□□□ -0.74
PTCH1-212ENST00000546744 ZNHIT1O43257 154 aa10.42□□□□□ -0.74
PTCH1-212ENST00000546744 C17orf82Q86X59 251 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-212ENST00000546744 ZNF747Q9BV97 191 aa10.42□□□□□ -0.74
PTCH1-212ENST00000546744 TMEM126AQ9H061 195 aa10.42□□□□□ -0.74
PTCH1-212ENST00000546744 PRO1854Q9UHT4 67 aa10.42□□□□□ -0.74
PTCH1-212ENST00000546744 IGLV3-1P01715 115 aa10.41□□□□□ -0.74
PTCH1-212ENST00000546744 IGHG4P01861 327 aa10.41□□□□□ -0.74
PTCH1-212ENST00000546744 IGLC1P0CG04 106 aa10.41□□□□□ -0.74
PTCH1-212ENST00000546744 GGNQ86UU5 652 aa10.41□□□□□ -0.74
PTCH1-212ENST00000546744 EXOC3-AS1Q8N2X6 119 aa10.41□□□□□ -0.74
PTCH1-212ENST00000546744 SDK2Q58EX2 2172 aa10.41□□□□□ -0.74
PTCH1-212ENST00000546744 GAGE2AQ6NT46 116 aa10.41□□□□□ -0.74
PTCH1-212ENST00000546744 TRAV40A0A0B4J280 105 aa10.4□□□□□ -0.74
PTCH1-212ENST00000546744 CD7P09564 240 aa10.4□□□□□ -0.74
PTCH1-212ENST00000546744 LY6G5BQ8NDX9 201 aa10.4□□□□□ -0.74
PTCH1-212ENST00000546744 TRAV12-3A0A0B4J271 114 aa10.4□□□□□ -0.74
PTCH1-212ENST00000546744 HAPLN4Q86UW8 402 aa10.4□□□□□ -0.74
PTCH1-212ENST00000546744 RNASE4P34096 147 aaKnown RBP10.4□□□□□ -0.74
PTCH1-212ENST00000546744 RNF144BQ7Z419 303 aa10.4□□□□□ -0.74
PTCH1-212ENST00000546744 NPFFR1Q9GZQ6 430 aa10.4□□□□□ -0.74
PTCH1-212ENST00000546744 NPYP01303 97 aa10.4□□□□□ -0.75
PTCH1-212ENST00000546744 IGKV3-15P01624 115 aa10.4□□□□□ -0.75
PTCH1-212ENST00000546744 FGFBP3Q8TAT2 258 aa10.4□□□□□ -0.75
PTCH1-212ENST00000546744 H0YJW9 148 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 NDUFB8O95169 186 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 HLA-DRB4P13762 266 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 PLAURQ03405 335 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 CYYR1Q96J86 154 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 HLA-DRB4X5D2U9 266 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 FANCMQ8IYD8 2048 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 UCNP55089 124 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 PRR20EP86478 221 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 PRR20CP86479 221 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 PRR20DP86480 221 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 PRR20BP86481 221 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 PRR20AP86496 221 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 C12orf74Q32Q52 190 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 PLXNB3Q9ULL4 1909 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 KLRD1Q13241 179 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 ZNF114Q8NC26 417 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 ATP6V0E2Q8NHE4 81 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 DUX5Q96PT3 197 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 TIMM21Q9BVV7 248 aa10.39□□□□□ -0.75
PTCH1-212ENST00000546744 SLC25A16P16260 332 aa10.38□□□□□ -0.75
PTCH1-212ENST00000546744 CCL3L1P16619 93 aa10.38□□□□□ -0.75
PTCH1-212ENST00000546744 HEATR5AQ86XA9 2040 aa10.38□□□□□ -0.75
PTCH1-212ENST00000546744 IGKV1-39P01597 117 aa10.38□□□□□ -0.75
PTCH1-212ENST00000546744 TRACP01848 142 aa10.38□□□□□ -0.75
PTCH1-212ENST00000546744 IGKV1D-39P04432 117 aa10.38□□□□□ -0.75
PTCH1-212ENST00000546744 CFAP161Q6P656 301 aa10.38□□□□□ -0.75
PTCH1-212ENST00000546744 TRAV3A0A0B4J244 114 aa10.37□□□□□ -0.75
PTCH1-212ENST00000546744 TEX48A0A1B0GUV7 120 aa10.37□□□□□ -0.75
PTCH1-212ENST00000546744 H3BMG7 143 aa10.37□□□□□ -0.75
PTCH1-212ENST00000546744 RCHY1Q96PM5 261 aa10.37□□□□□ -0.75
PTCH1-212ENST00000546744 CLEC19AQ6UXS0 136 aa10.37□□□□□ -0.75
PTCH1-212ENST00000546744 FOXI2Q6ZQN5 318 aa10.37□□□□□ -0.75
PTCH1-212ENST00000546744 IGHV3-35A0A0C4DH35 117 aa10.37□□□□□ -0.75
PTCH1-212ENST00000546744 LEPROTO15243 131 aa10.37□□□□□ -0.75
PTCH1-212ENST00000546744 SRSF2Q01130 221 aaKnown RBP10.37□□□□□ -0.75
PTCH1-212ENST00000546744 G3V4G9 280 aa10.37□□□□□ -0.75
PTCH1-212ENST00000546744 PRO3102Q9H379 93 aa10.37□□□□□ -0.75
PTCH1-212ENST00000546744 IGKV2-40A0A087WW87 121 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-212ENST00000546744 IGKV2D-40P01614 121 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-212ENST00000546744 CELA3BP08861 270 aa10.36□□□□□ -0.75
PTCH1-212ENST00000546744 SIGLEC15Q6ZMC9 328 aa10.36□□□□□ -0.75
PTCH1-212ENST00000546744 DEFB124Q8NES8 71 aa10.36□□□□□ -0.75
PTCH1-212ENST00000546744 DUX3Q96PT4 197 aa10.36□□□□□ -0.75
PTCH1-212ENST00000546744 C20orf78Q9BR46 151 aa10.36□□□□□ -0.75
PTCH1-212ENST00000546744 WNK2Q9Y3S1 2297 aa10.36□□□□□ -0.75
PTCH1-212ENST00000546744 CHD7Q9P2D1 2997 aa10.36□□□□□ -0.75
PTCH1-212ENST00000546744 C2orf66Q6UXQ4 117 aa10.36□□□□□ -0.75
PTCH1-212ENST00000546744 K7EM74 188 aa10.36□□□□□ -0.75
PTCH1-212ENST00000546744 CELA3AP09093 270 aa10.36□□□□□ -0.75
PTCH1-212ENST00000546744 MRPL51Q4U2R6 128 aaKnown RBP10.36□□□□□ -0.75
PTCH1-212ENST00000546744 TCTEX1D4Q5JR98 221 aa10.36□□□□□ -0.75
PTCH1-212ENST00000546744 MINOS1Q5TGZ0 78 aa10.36□□□□□ -0.75
PTCH1-212ENST00000546744 MINOS1-NBL1R4GNA1 71 aa10.36□□□□□ -0.75
PTCH1-212ENST00000546744 TAX1BP3O14907 124 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 HIST1H4AP62805 103 aaKnown RBP10.35□□□□□ -0.75
PTCH1-212ENST00000546744 SCRT2Q9NQ03 307 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 KIAA2026Q5HYC2 2103 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 TRBV19A0A075B6N1 114 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 PATE3B3GLJ2 98 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 SOCS3O14543 225 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 PPIFP30405 207 aaKnown RBP10.35□□□□□ -0.75
PTCH1-212ENST00000546744 C20orf204Q6ZNR8 217 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 Q6ZSR3 168 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 TEN1Q86WV5 123 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 LINC00479Q96M42 142 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 NDUFA4L2Q9NRX3 87 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 TOMM7Q9P0U1 55 aa10.35□□□□□ -0.75
PTCH1-212ENST00000546744 SIGLEC9Q9Y336 463 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms